RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 U3KQV3 271 aa12.66□□□□□ -0.38
RAB40B-202ENST00000538809 PLPP2O43688 288 aa12.65□□□□□ -0.38
RAB40B-202ENST00000538809 PNPP00491 289 aa12.65□□□□□ -0.38
RAB40B-202ENST00000538809 HLA-DQA2P01906 255 aa12.65□□□□□ -0.38
RAB40B-202ENST00000538809 TNFSF4P23510 183 aa12.65□□□□□ -0.38
RAB40B-202ENST00000538809 PYCR1P32322 319 aa12.65□□□□□ -0.38
RAB40B-202ENST00000538809 GGT2P36268 569 aa12.65□□□□□ -0.38
RAB40B-202ENST00000538809 PRSS12P56730 875 aa12.65□□□□□ -0.38
RAB40B-202ENST00000538809 OR2T2Q6IF00 324 aa12.65□□□□□ -0.38
RAB40B-202ENST00000538809 SLC18B1Q6NT16 456 aa12.65□□□□□ -0.38
RAB40B-202ENST00000538809 FAHD2BQ6P2I3 314 aaPredicted RBP12.65□□□□□ -0.38
RAB40B-202ENST00000538809 CD300LDQ6UXZ3 194 aa12.65□□□□□ -0.38
RAB40B-202ENST00000538809 CYB561A3Q8NBI2 242 aa12.65□□□□□ -0.38
RAB40B-202ENST00000538809 OR4Q3Q8NH05 313 aa12.65□□□□□ -0.38
RAB40B-202ENST00000538809 CANT1Q8WVQ1 401 aa12.65□□□□□ -0.38
RAB40B-202ENST00000538809 ZNRF4Q8WWF5 429 aa12.65□□□□□ -0.38
RAB40B-202ENST00000538809 HAVCR1Q96D42 359 aa12.65□□□□□ -0.38
RAB40B-202ENST00000538809 FAHD2AQ96GK7 314 aa12.65□□□□□ -0.38
RAB40B-202ENST00000538809 LRGUKQ96M69 825 aa12.65□□□□□ -0.38
RAB40B-202ENST00000538809 COG8Q96MW5 612 aa12.65□□□□□ -0.38
RAB40B-202ENST00000538809 CHID1Q9BWS9 393 aa12.65□□□□□ -0.38
RAB40B-202ENST00000538809 WDR76Q9H967 626 aa12.65□□□□□ -0.38
RAB40B-202ENST00000538809 PNRC2Q9NPJ4 139 aaKnown RBP12.65□□□□□ -0.38
RAB40B-202ENST00000538809 G6PC2Q9NQR9 355 aa12.65□□□□□ -0.38
RAB40B-202ENST00000538809 CYB5R1Q9UHQ9 305 aa12.65□□□□□ -0.38
RAB40B-202ENST00000538809 LOC105371242A0A075B767 164 aa12.64□□□□□ -0.39
RAB40B-202ENST00000538809 ARRDC5A6NEK1 342 aa12.64□□□□□ -0.39
RAB40B-202ENST00000538809 TCF21O43680 179 aa12.64□□□□□ -0.39
RAB40B-202ENST00000538809 RGS9O75916 674 aaPredicted RBP12.64□□□□□ -0.39
RAB40B-202ENST00000538809 RPS27P42677 84 aaKnown RBP12.64□□□□□ -0.39
RAB40B-202ENST00000538809 RGS6P49758 472 aa12.64□□□□□ -0.39
RAB40B-202ENST00000538809 SLC3A1Q07837 685 aa12.64□□□□□ -0.39
RAB40B-202ENST00000538809 SLC36A3Q495N2 470 aa12.64□□□□□ -0.39
RAB40B-202ENST00000538809 DNAL1Q4LDG9 190 aa12.64□□□□□ -0.39
RAB40B-202ENST00000538809 LYPD4Q6UWN0 246 aa12.64□□□□□ -0.39
RAB40B-202ENST00000538809 COLCA1Q6ZS62 124 aa12.64□□□□□ -0.39
RAB40B-202ENST00000538809 TMEM179BQ7Z7N9 219 aa12.64□□□□□ -0.39
RAB40B-202ENST00000538809 PEG10Q86TG7 708 aaKnown RBP12.64□□□□□ -0.39
RAB40B-202ENST00000538809 RFLNBQ8N5W9 214 aa12.64□□□□□ -0.39
RAB40B-202ENST00000538809 SLC37A3Q8NCC5 494 aa12.64□□□□□ -0.39
RAB40B-202ENST00000538809 BHLHE23Q8NDY6 225 aa12.64□□□□□ -0.39
RAB40B-202ENST00000538809 OR10G2Q8NGC3 310 aa12.64□□□□□ -0.39
RAB40B-202ENST00000538809 OR10AD1Q8NGE0 317 aa12.64□□□□□ -0.39
RAB40B-202ENST00000538809 PTP4A1Q93096 173 aa12.64□□□□□ -0.39
RAB40B-202ENST00000538809 APOBEC3DQ96AK3 386 aaPredicted RBP12.64□□□□□ -0.39
RAB40B-202ENST00000538809 OR2V2Q96R30 315 aa12.64□□□□□ -0.39
RAB40B-202ENST00000538809 NIPSNAP1Q9BPW8 284 aa12.64□□□□□ -0.39
RAB40B-202ENST00000538809 RBM4Q9BWF3 364 aaKnown RBP12.64□□□□□ -0.39
RAB40B-202ENST00000538809 TSSK6Q9BXA6 273 aa12.64□□□□□ -0.39
RAB40B-202ENST00000538809 NMNAT2Q9BZQ4 307 aa12.64□□□□□ -0.39
RAB40B-202ENST00000538809 TMEM106BQ9NUM4 274 aa12.64□□□□□ -0.39
RAB40B-202ENST00000538809 TBC1D23Q9NUY8 699 aa12.64□□□□□ -0.39
RAB40B-202ENST00000538809 METRNQ9UJH8 293 aa12.64□□□□□ -0.39
RAB40B-202ENST00000538809 NPTNQ9Y639 398 aa12.64□□□□□ -0.39
RAB40B-202ENST00000538809 TCRBV3S1A0A5B6 114 aa12.63□□□□□ -0.39
RAB40B-202ENST00000538809 DHRS12A0PJE2 317 aa12.63□□□□□ -0.39
RAB40B-202ENST00000538809 TVP23AA6NH52 213 aa12.63□□□□□ -0.39
RAB40B-202ENST00000538809 GYG2O15488 501 aa12.63□□□□□ -0.39
RAB40B-202ENST00000538809 SOX14O95416 240 aa12.63□□□□□ -0.39
RAB40B-202ENST00000538809 CST1P01037 141 aa12.63□□□□□ -0.39
RAB40B-202ENST00000538809 AVPP01185 164 aa12.63□□□□□ -0.39
RAB40B-202ENST00000538809 IGHV2-70P01814 119 aa12.63□□□□□ -0.39
RAB40B-202ENST00000538809 SBK2P0C263 348 aa12.63□□□□□ -0.39
RAB40B-202ENST00000538809 PSKH1P11801 424 aa12.63□□□□□ -0.39
RAB40B-202ENST00000538809 ANPEPP15144 967 aa12.63□□□□□ -0.39
RAB40B-202ENST00000538809 RAC2P15153 192 aa12.63□□□□□ -0.39
RAB40B-202ENST00000538809 LCN2P80188 198 aa12.63□□□□□ -0.39
RAB40B-202ENST00000538809 FBXW12Q6X9E4 464 aa12.63□□□□□ -0.39
RAB40B-202ENST00000538809 C1orf229Q6ZS94 237 aaPredicted RBP12.63□□□□□ -0.39
RAB40B-202ENST00000538809 PROKR2Q8NFJ6 384 aa12.63□□□□□ -0.39
RAB40B-202ENST00000538809 OR51L1Q8NGJ5 315 aa12.63□□□□□ -0.39
RAB40B-202ENST00000538809 OR5L1Q8NGL2 311 aa12.63□□□□□ -0.39
RAB40B-202ENST00000538809 OR10S1Q8NGN2 331 aa12.63□□□□□ -0.39
RAB40B-202ENST00000538809 OR2AJ1Q8NGZ0 328 aa12.63□□□□□ -0.39
RAB40B-202ENST00000538809 PITX2Q99697 317 aa12.63□□□□□ -0.39
RAB40B-202ENST00000538809 ATF6BQ99941 703 aa12.63□□□□□ -0.39
RAB40B-202ENST00000538809 TMPRSS13Q9BYE2 586 aa12.63□□□□□ -0.39
RAB40B-202ENST00000538809 OCEL1Q9H607 264 aa12.63□□□□□ -0.39
RAB40B-202ENST00000538809 ARMC1Q9NVT9 282 aa12.63□□□□□ -0.39
RAB40B-202ENST00000538809 KCNG2Q9UJ96 466 aa12.63□□□□□ -0.39
RAB40B-202ENST00000538809 BAIAP2Q9UQB8 552 aa12.63□□□□□ -0.39
RAB40B-202ENST00000538809 A0A0G2JMP0 313 aa12.62□□□□□ -0.39
RAB40B-202ENST00000538809 IGHV3-64DA0A0J9YX35 117 aa12.62□□□□□ -0.39
RAB40B-202ENST00000538809 A0A0X1KG70 313 aa12.62□□□□□ -0.39
RAB40B-202ENST00000538809 F5H5K5 113 aa12.62□□□□□ -0.39
RAB40B-202ENST00000538809 H0YL77 283 aa12.62□□□□□ -0.39
RAB40B-202ENST00000538809 ACSM4P0C7M7 580 aa12.62□□□□□ -0.39
RAB40B-202ENST00000538809 TNFRSF1AP19438 455 aa12.62□□□□□ -0.39
RAB40B-202ENST00000538809 CRMP1Q14194 572 aa12.62□□□□□ -0.39
RAB40B-202ENST00000538809 PCK2Q16822 640 aa12.62□□□□□ -0.39
RAB40B-202ENST00000538809 DCAF12L2Q5VW00 463 aa12.62□□□□□ -0.39
RAB40B-202ENST00000538809 LIPNQ5VXI9 398 aa12.62□□□□□ -0.39
RAB40B-202ENST00000538809 NAA40Q86UY6 237 aa12.62□□□□□ -0.39
RAB40B-202ENST00000538809 ZNF283Q8N7M2 679 aa12.62□□□□□ -0.39
RAB40B-202ENST00000538809 ATG16L2Q8NAA4 619 aa12.62□□□□□ -0.39
RAB40B-202ENST00000538809 PAPD5Q8NDF8 572 aaKnown RBP12.62□□□□□ -0.39
RAB40B-202ENST00000538809 OR2T33Q8NG76 320 aa12.62□□□□□ -0.39
RAB40B-202ENST00000538809 OR4M2Q8NGB6 313 aa12.62□□□□□ -0.39
RAB40B-202ENST00000538809 OR9Q1Q8NGQ5 310 aa12.62□□□□□ -0.39
RAB40B-202ENST00000538809 OR2T4Q8NH00 348 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms