RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 URGCP-MRPS24S4R325 110 aa11.19□□□□□ -0.62
USP3-203ENST00000538686 SAP18O00422 153 aaKnown RBP11.18□□□□□ -0.62
USP3-203ENST00000538686 SNAI1O95863 264 aaPredicted RBP11.18□□□□□ -0.62
USP3-203ENST00000538686 SLC16A8O95907 504 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 OR4A8P0C604 315 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 PGA4P0DJD7 388 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 PGA3P0DJD8 388 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 PGA5P0DJD9 388 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 FGF5P12034 268 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 GALNSP34059 522 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 GJA4P35212 333 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 TMEM64Q6YI46 380 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 WDR88Q6ZMY6 472 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 ADIPOR2Q86V24 386 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 C11orf42Q8N5U0 333 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 RFLNBQ8N5W9 214 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 OR51D1Q8NGF3 324 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 OR52E1Q8NGJ3 308 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 OR6K2Q8NGY2 324 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 SLC25A43Q8WUT9 341 aaPredicted RBP11.18□□□□□ -0.62
USP3-203ENST00000538686 KTI12Q96EK9 354 aaPredicted RBP11.18□□□□□ -0.62
USP3-203ENST00000538686 MS4A4AQ96JQ5 239 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 MIEN1Q9BRT3 115 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 OR2J1Q9GZK6 312 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 OR11A1Q9GZK7 315 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 METTL8Q9H825 291 aaKnown RBP11.18□□□□□ -0.62
USP3-203ENST00000538686 TXNRD2Q9NNW7 524 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 PRSS16Q9NQE7 514 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 MARCH2Q9P0N8 246 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 OSGIN2Q9Y236 505 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 CASP8AP2Q9UKL3 1982 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 UMODP07911 640 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 RHOCP08134 193 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 CHRM2P08172 466 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 MMP3P08254 477 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 LIPCP11150 499 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 PSMB10P40306 273 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 TNFSF10P50591 281 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 PTTG1IPP53801 180 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 MRPL58Q14197 206 aaKnown RBP11.18□□□□□ -0.62
USP3-203ENST00000538686 FAM220AQ7Z4H9 259 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 ZNF321PQ8N8H1 164 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 OR9A1PQ8NGU1 263 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 OR14L1PQ8NHC6 308 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 TMEM106AQ96A25 262 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 FAM3DQ96BQ1 224 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 C20orf144Q9BQM9 153 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 ZCCHC3Q9NUD5 404 aaKnown RBP11.18□□□□□ -0.62
USP3-203ENST00000538686 FOXD3Q9UJU5 478 aaPredicted RBP11.18□□□□□ -0.62
USP3-203ENST00000538686 NTNG1Q9Y2I2 539 aa11.18□□□□□ -0.62
USP3-203ENST00000538686 TRBV5-7A0A0A0MS05 114 aa11.17□□□□□ -0.62
USP3-203ENST00000538686 H3BRB1 525 aa11.17□□□□□ -0.62
USP3-203ENST00000538686 SLC17A2O00624 439 aa11.17□□□□□ -0.62
USP3-203ENST00000538686 OPN1MWP04001 364 aa11.17□□□□□ -0.62
USP3-203ENST00000538686 OPN1MW2P0DN77 364 aa11.17□□□□□ -0.62
USP3-203ENST00000538686 OPN1MW3P0DN78 364 aa11.17□□□□□ -0.62
USP3-203ENST00000538686 AKR1C4P17516 323 aa11.17□□□□□ -0.62
USP3-203ENST00000538686 HMGB2P26583 209 aaKnown RBP11.17□□□□□ -0.62
USP3-203ENST00000538686 RPL12P30050 165 aaKnown RBP11.17□□□□□ -0.62
USP3-203ENST00000538686 RAB7AP51149 207 aa11.17□□□□□ -0.62
USP3-203ENST00000538686 EFNB2P52799 333 aa11.17□□□□□ -0.62
USP3-203ENST00000538686 PNRC1Q12796 327 aaPredicted RBP11.17□□□□□ -0.62
USP3-203ENST00000538686 TNFAIP1Q13829 316 aa11.17□□□□□ -0.62
USP3-203ENST00000538686 TMEM128Q5BJH2 165 aa11.17□□□□□ -0.62
USP3-203ENST00000538686 C1orf189Q5VU69 101 aa11.17□□□□□ -0.62
USP3-203ENST00000538686 TMEM220Q6QAJ8 160 aa11.17□□□□□ -0.62
USP3-203ENST00000538686 MRPL41Q8IXM3 137 aaKnown RBP11.17□□□□□ -0.62
USP3-203ENST00000538686 NOXO1Q8NFA2 376 aa11.17□□□□□ -0.62
USP3-203ENST00000538686 C2orf15Q8WU43 125 aaKnown RBP11.17□□□□□ -0.62
USP3-203ENST00000538686 FGF13Q92913 245 aa11.17□□□□□ -0.62
USP3-203ENST00000538686 CCDC74AQ96AQ1 378 aa11.17□□□□□ -0.62
USP3-203ENST00000538686 JSRP1Q96MG2 331 aaPredicted RBP11.17□□□□□ -0.62
USP3-203ENST00000538686 TTTY10Q9BZA0 68 aa11.17□□□□□ -0.62
USP3-203ENST00000538686 SLC7A7Q9UM01 511 aa11.17□□□□□ -0.62
USP3-203ENST00000538686 CYP8B1Q9UNU6 501 aa11.17□□□□□ -0.62
USP3-203ENST00000538686 TMED7Q9Y3B3 224 aa11.17□□□□□ -0.62
USP3-203ENST00000538686 CLDN34H7C241 214 aa11.16□□□□□ -0.62
USP3-203ENST00000538686 HSD17B6O14756 317 aa11.16□□□□□ -0.62
USP3-203ENST00000538686 GEMIN2O14893 280 aaKnown RBP11.16□□□□□ -0.62
USP3-203ENST00000538686 NUDT21O43809 227 aaKnown RBP11.16□□□□□ -0.62
USP3-203ENST00000538686 ERAL1O75616 437 aaKnown RBP11.16□□□□□ -0.62
USP3-203ENST00000538686 SCAF4O95104 1147 aaKnown RBP11.16□□□□□ -0.62
USP3-203ENST00000538686 NTSP30990 170 aa11.16□□□□□ -0.62
USP3-203ENST00000538686 TSFMP43897 325 aaKnown RBP11.16□□□□□ -0.62
USP3-203ENST00000538686 B4GALNT1Q00973 533 aa11.16□□□□□ -0.62
USP3-203ENST00000538686 TGM3Q08188 693 aa11.16□□□□□ -0.62
USP3-203ENST00000538686 FUT5Q11128 374 aa11.16□□□□□ -0.62
USP3-203ENST00000538686 UPP1Q16831 310 aa11.16□□□□□ -0.62
USP3-203ENST00000538686 C2orf76Q3KRA6 126 aa11.16□□□□□ -0.62
USP3-203ENST00000538686 MORN1Q5T089 497 aa11.16□□□□□ -0.62
USP3-203ENST00000538686 SPRYD7Q5W111 196 aa11.16□□□□□ -0.62
USP3-203ENST00000538686 KIRREL2Q6UWL6 708 aa11.16□□□□□ -0.62
USP3-203ENST00000538686 FBXW12Q6X9E4 464 aa11.16□□□□□ -0.62
USP3-203ENST00000538686 TIPARPQ7Z3E1 657 aaKnown RBP11.16□□□□□ -0.62
USP3-203ENST00000538686 ZNF429Q86V71 674 aa11.16□□□□□ -0.62
USP3-203ENST00000538686 OR51A2Q8NGJ7 313 aa11.16□□□□□ -0.62
USP3-203ENST00000538686 ZMYND19Q96E35 227 aaPredicted RBP11.16□□□□□ -0.62
USP3-203ENST00000538686 MENTQ9BUN1 341 aa11.16□□□□□ -0.62
USP3-203ENST00000538686 SRD5A3Q9H8P0 318 aa11.16□□□□□ -0.62
USP3-203ENST00000538686 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms