RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 Q9N2J8 555 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 PDE7BQ9NP56 450 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 DNAJB11Q9UBS4 358 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 RAB22AQ9UL26 194 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 PTPRSQ13332 1948 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 A6NLC8 198 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 TAAR5O14804 337 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 HLA-DQA2P01906 255 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 CSTBP04080 98 aaKnown RBP16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 LINC00271P0C7V0 271 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 NQO2P16083 231 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 RAB5AP20339 215 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 NME2P22392 152 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 ACKR3P25106 362 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 DNASE1L1P49184 302 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 KIR2DS3Q14952 304 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 FIGLAQ6QHK4 219 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 CATSPERDQ86XM0 798 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 MARCH1Q8TCQ1 289 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 RERGQ96A58 199 aaPredicted RBP16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 GDE1Q9NZC3 331 aa16.66■□□□□ 0.26
SFSWAP-207ENST00000538548 AP4M1O00189 453 aa16.65■□□□□ 0.26
SFSWAP-207ENST00000538548 ACTR1AP61163 376 aa16.65■□□□□ 0.26
SFSWAP-207ENST00000538548 EGR4Q05215 589 aa16.65■□□□□ 0.26
SFSWAP-207ENST00000538548 NKAIN3Q8N8D7 197 aa16.65■□□□□ 0.26
SFSWAP-207ENST00000538548 BHLHE23Q8NDY6 225 aa16.65■□□□□ 0.26
SFSWAP-207ENST00000538548 MRPL38Q96DV4 380 aaKnown RBP16.65■□□□□ 0.26
SFSWAP-207ENST00000538548 KIF26BQ2KJY2 2108 aa16.65■□□□□ 0.26
SFSWAP-207ENST00000538548 H0YGG7 62 aa16.65■□□□□ 0.26
SFSWAP-207ENST00000538548 ARF3P61204 181 aaPredicted RBP16.65■□□□□ 0.26
SFSWAP-207ENST00000538548 AWAT1Q58HT5 328 aa16.65■□□□□ 0.26
SFSWAP-207ENST00000538548 KRBOX4Q5JUW0 171 aa16.65■□□□□ 0.26
SFSWAP-207ENST00000538548 KCTD18Q6PI47 426 aaPredicted RBP16.65■□□□□ 0.26
SFSWAP-207ENST00000538548 DTWD2Q8NBA8 298 aa16.65■□□□□ 0.26
SFSWAP-207ENST00000538548 CHST4Q8NCG5 386 aa16.65■□□□□ 0.26
SFSWAP-207ENST00000538548 OR4D6Q8NGJ1 314 aa16.65■□□□□ 0.26
SFSWAP-207ENST00000538548 FAM46BQ96A09 425 aa16.65■□□□□ 0.26
SFSWAP-207ENST00000538548 CMBLQ96DG6 245 aa16.65■□□□□ 0.26
SFSWAP-207ENST00000538548 SPACA7Q96KW9 195 aa16.65■□□□□ 0.26
SFSWAP-207ENST00000538548 ZFYVE21Q9BQ24 234 aa16.65■□□□□ 0.26
SFSWAP-207ENST00000538548 IL23AQ9NPF7 189 aa16.65■□□□□ 0.26
SFSWAP-207ENST00000538548 TBC1D29Q9UFV1 150 aa16.65■□□□□ 0.26
SFSWAP-207ENST00000538548 C7orf77A4D0Y5 90 aa16.64■□□□□ 0.25
SFSWAP-207ENST00000538548 PET100P0DJ07 73 aa16.64■□□□□ 0.25
SFSWAP-207ENST00000538548 LAP3P28838 519 aa16.64■□□□□ 0.25
SFSWAP-207ENST00000538548 CD1CP29017 333 aa16.64■□□□□ 0.25
SFSWAP-207ENST00000538548 RIDAP52758 137 aaKnown RBP16.64■□□□□ 0.25
SFSWAP-207ENST00000538548 OTPQ5XKR4 325 aa16.64■□□□□ 0.25
SFSWAP-207ENST00000538548 RPL7L1Q6DKI1 246 aaKnown RBP16.64■□□□□ 0.25
SFSWAP-207ENST00000538548 MDGA2Q7Z553 956 aa16.64■□□□□ 0.25
SFSWAP-207ENST00000538548 LYPD6Q86Y78 171 aa16.64■□□□□ 0.25
SFSWAP-207ENST00000538548 SECTM1Q8WVN6 248 aa16.64■□□□□ 0.25
SFSWAP-207ENST00000538548 RSC1A1Q92681 617 aa16.64■□□□□ 0.25
SFSWAP-207ENST00000538548 HHLA2Q9UM44 414 aa16.64■□□□□ 0.25
SFSWAP-207ENST00000538548 B9D1Q9UPM9 204 aa16.64■□□□□ 0.25
SFSWAP-207ENST00000538548 PRAMEF26H0Y7S4 382 aa16.64■□□□□ 0.25
SFSWAP-207ENST00000538548 EML2O95834 649 aa16.64■□□□□ 0.25
SFSWAP-207ENST00000538548 RABIFP47224 123 aa16.64■□□□□ 0.25
SFSWAP-207ENST00000538548 SSTP61278 116 aa16.64■□□□□ 0.25
SFSWAP-207ENST00000538548 ANGPTL5Q86XS5 388 aa16.64■□□□□ 0.25
SFSWAP-207ENST00000538548 OR13C3Q8NGS6 347 aa16.64■□□□□ 0.25
SFSWAP-207ENST00000538548 MALSU1Q96EH3 234 aa16.64■□□□□ 0.25
SFSWAP-207ENST00000538548 A0A1W2PPH5 198 aa16.63■□□□□ 0.25
SFSWAP-207ENST00000538548 ADAP1O75689 374 aa16.63■□□□□ 0.25
SFSWAP-207ENST00000538548 SPARCP09486 303 aa16.63■□□□□ 0.25
SFSWAP-207ENST00000538548 ADH6P28332 368 aa16.63■□□□□ 0.25
SFSWAP-207ENST00000538548 TGIF1Q15583 401 aa16.63■□□□□ 0.25
SFSWAP-207ENST00000538548 NNATQ16517 81 aa16.63■□□□□ 0.25
SFSWAP-207ENST00000538548 GAB4Q2WGN9 574 aa16.63■□□□□ 0.25
SFSWAP-207ENST00000538548 OR2B11Q5JQS5 317 aa16.63■□□□□ 0.25
SFSWAP-207ENST00000538548 ISOC2Q96AB3 205 aa16.63■□□□□ 0.25
SFSWAP-207ENST00000538548 RSRP1Q9BUV0 290 aa16.63■□□□□ 0.25
SFSWAP-207ENST00000538548 RHBDD3Q9Y3P4 386 aa16.63■□□□□ 0.25
SFSWAP-207ENST00000538548 OTOL1A6NHN0 477 aaPredicted RBP16.63■□□□□ 0.25
SFSWAP-207ENST00000538548 PPIHO43447 177 aaKnown RBP16.63■□□□□ 0.25
SFSWAP-207ENST00000538548 SFT2D2O95562 160 aa16.63■□□□□ 0.25
SFSWAP-207ENST00000538548 SNRNP70P08621 437 aaKnown RBP16.63■□□□□ 0.25
SFSWAP-207ENST00000538548 CTNNB1P35222 781 aa16.63■□□□□ 0.25
SFSWAP-207ENST00000538548 BCORP1Q8N888 145 aa16.63■□□□□ 0.25
SFSWAP-207ENST00000538548 TERB2Q8NHR7 220 aa16.63■□□□□ 0.25
SFSWAP-207ENST00000538548 LYPD6BQ8NI32 183 aa16.63■□□□□ 0.25
SFSWAP-207ENST00000538548 KTI12Q96EK9 354 aaPredicted RBP16.63■□□□□ 0.25
SFSWAP-207ENST00000538548 ADAM19Q9H013 955 aa16.63■□□□□ 0.25
SFSWAP-207ENST00000538548 PCOLCE2Q9UKZ9 415 aa16.63■□□□□ 0.25
SFSWAP-207ENST00000538548 HRKO00198 91 aa16.62■□□□□ 0.25
SFSWAP-207ENST00000538548 XKRYO14609 159 aa16.62■□□□□ 0.25
SFSWAP-207ENST00000538548 PMP2P02689 132 aa16.62■□□□□ 0.25
SFSWAP-207ENST00000538548 RAB2AP61019 212 aa16.62■□□□□ 0.25
SFSWAP-207ENST00000538548 EBPQ15125 230 aaKnown RBP16.62■□□□□ 0.25
SFSWAP-207ENST00000538548 DBX2Q6ZNG2 339 aa16.62■□□□□ 0.25
SFSWAP-207ENST00000538548 Q6ZRG5 221 aa16.62■□□□□ 0.25
SFSWAP-207ENST00000538548 OR51F2Q8NH61 342 aa16.62■□□□□ 0.25
SFSWAP-207ENST00000538548 C8orf44Q96CB5 159 aa16.62■□□□□ 0.25
SFSWAP-207ENST00000538548 GGACTQ9BVM4 153 aa16.62■□□□□ 0.25
SFSWAP-207ENST00000538548 SERGEFQ9UGK8 458 aa16.62■□□□□ 0.25
SFSWAP-207ENST00000538548 hCG_1809904A0A1W2PP81 198 aa16.62■□□□□ 0.25
SFSWAP-207ENST00000538548 A0A1W2PR64 198 aa16.62■□□□□ 0.25
SFSWAP-207ENST00000538548 A0A1W2PRV1 198 aa16.62■□□□□ 0.25
SFSWAP-207ENST00000538548 OR8U9P0C7N5 309 aa16.62■□□□□ 0.25
SFSWAP-207ENST00000538548 CT45A8P0DMV1 189 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms