RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 ABI3BPQ7Z7G0 1075 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 CDC20BQ86Y33 519 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 UBE2FQ969M7 185 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 PDCD1LG2Q9BQ51 273 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 GSX1Q9H4S2 264 aaPredicted RBP6.31□□□□□ -1.4
SORT1-209ENST00000538502 ZNF275Q9NSD4 429 aaPredicted RBP6.31□□□□□ -1.4
SORT1-209ENST00000538502 CLDND1Q9NY35 253 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 TMED3Q9Y3Q3 217 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 MYO10Q9HD67 2058 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 HRH1P35367 487 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 TNFRSF4P43489 277 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 SHHQ15465 462 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 TBC1D28Q2M2D7 210 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 FAM74A3Q4VXF1 159 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 VWA2Q5GFL6 755 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 C1QTNF12Q5T7M4 302 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 TOMM20LQ6UXN7 152 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 TMEM123Q8N131 208 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 OR13C5Q8NGS8 318 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 CCDC74BQ96LY2 380 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 INSM2Q96T92 566 aaPredicted RBP6.31□□□□□ -1.4
SORT1-209ENST00000538502 Q9N2K0 584 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 GDE1Q9NZC3 331 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 FLVCR2Q9UPI3 526 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 RGPD8O14715 1765 aaPredicted RBP6.31□□□□□ -1.4
SORT1-209ENST00000538502 SERTM1A2A2V5 107 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 SMAD6O43541 496 aaKnown RBP6.31□□□□□ -1.4
SORT1-209ENST00000538502 XRCC2O43543 280 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 NXPH2O95156 264 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 HNF1AP20823 631 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 AKR1C3P42330 323 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 SLC6A12P48065 614 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 CNN1P51911 297 aaKnown RBP6.31□□□□□ -1.4
SORT1-209ENST00000538502 LINC00303Q3SY05 128 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 EDEM2Q9BV94 578 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 CHST11Q9NPF2 352 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 SLC25A37Q9NYZ2 338 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 CGGBP1Q9UFW8 167 aaPredicted RBP6.31□□□□□ -1.4
SORT1-209ENST00000538502 SIGLEC1Q9BZZ2 1709 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 GFYI3L273 518 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 SLC17A2O00624 439 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 WNT11O96014 354 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 TMEM241Q24JQ0 296 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 MIDNQ504T8 468 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 TMEM268Q5VZI3 342 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 TRNP1Q6NT89 227 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 MED25Q71SY5 747 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 DND1Q8IYX4 353 aaKnown RBP6.31□□□□□ -1.4
SORT1-209ENST00000538502 NLGN4XQ8N0W4 816 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 RNF175Q8N4F7 328 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 NUDCD2Q8WVJ2 157 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 LIPHQ8WWY8 451 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 TRAF4Q9BUZ4 470 aaPredicted RBP6.31□□□□□ -1.4
SORT1-209ENST00000538502 NMES1Q9C002 83 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 NGBQ9NPG2 151 aa6.31□□□□□ -1.4
SORT1-209ENST00000538502 NOSIPQ9Y314 301 aaKnown RBP6.31□□□□□ -1.4
SORT1-209ENST00000538502 A0A087X0M5 115 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 A0A1B0GX30 115 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 IQCF3P0C7M6 154 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 OTX2P32243 289 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 HYAL4Q2M3T9 481 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 DEFB110Q30KQ9 67 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 Q6ZSR6 202 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 LRRTM1Q86UE6 522 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 THNSL2Q86YJ6 484 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 NXPE3Q969Y0 559 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 RPUSD4Q96CM3 377 aaKnown RBP6.3□□□□□ -1.4
SORT1-209ENST00000538502 FAM210BQ96KR6 192 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 SHARPINQ9H0F6 387 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 SMDT1Q9H4I9 107 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 MANBALQ9NQG1 85 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 KCND3Q9UK17 655 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 CXorf51AA0A1B0GTR3 108 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 A6NCN8 305 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 ZNF732B4DXR9 585 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 H7C1C5 153 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 M0R082 166 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 SH2D1BO14796 132 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 TIMM8AO60220 97 aaPredicted RBP6.3□□□□□ -1.4
SORT1-209ENST00000538502 OR10J1P30954 320 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 RFC3P40938 356 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 LCN15Q6UWW0 184 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 ZNF66Q6ZN08 573 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 GOT1L1Q8NHS2 421 aaPredicted RBP6.3□□□□□ -1.4
SORT1-209ENST00000538502 RAB24Q969Q5 203 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 ANGPTL4Q9BY76 406 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 WWTR1Q9GZV5 400 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 FTSJ1Q9UET6 329 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 CA14Q9ULX7 337 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 PLCH1Q4KWH8 1693 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 LAMB1P07942 1786 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 A0A1W2PPQ1 181 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 PRAMEF25A6NGN4 478 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 ZNF207O43670 478 aaKnown RBP6.3□□□□□ -1.4
SORT1-209ENST00000538502 FZD6O60353 706 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 SFT2D2O95562 160 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 NPPBP16860 134 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 TCN2P20062 427 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 HOXD9P28356 352 aaPredicted RBP6.3□□□□□ -1.4
SORT1-209ENST00000538502 THBS4P35443 961 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms