RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 MOGAT2Q3SYC2 334 aa12.41□□□□□ -0.42
LIMK1-208ENST00000538333 ZNF468Q5VIY5 522 aaPredicted RBP12.41□□□□□ -0.42
LIMK1-208ENST00000538333 OR10K2Q6IF99 312 aa12.41□□□□□ -0.42
LIMK1-208ENST00000538333 SPICQ8N5J4 248 aa12.41□□□□□ -0.42
LIMK1-208ENST00000538333 OR2AJ1Q8NGZ0 328 aa12.41□□□□□ -0.42
LIMK1-208ENST00000538333 CNTD2Q9H8S5 307 aa12.41□□□□□ -0.42
LIMK1-208ENST00000538333 OR2M5A3KFT3 312 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 SNRPGP15A8MWD9 76 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 G3V3Y1 287 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 RER1O15258 196 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 CD3DP04234 171 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 LPLP06858 475 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 GTF2F2P13984 249 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 RAB6AP20340 208 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 ANOS1P23352 680 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 DBX2Q6ZNG2 339 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 NLRC3Q7RTR2 1065 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 SLC36A1Q7Z2H8 476 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 TMEM156Q8N614 296 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 OR52N4Q8NGI2 321 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 OR6N1Q8NGY5 312 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 METTL17Q9H7H0 456 aaPredicted RBP12.4□□□□□ -0.42
LIMK1-208ENST00000538333 SCPEP1Q9HB40 452 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 HPF1Q9NWY4 346 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 SLC23A1Q9UHI7 598 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 VSIG10L2P0DP72 767 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 DNASE1P24855 282 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 ZNF133P52736 654 aaPredicted RBP12.4□□□□□ -0.42
LIMK1-208ENST00000538333 CAPZA1P52907 286 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 ACTBP60709 375 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 ACTG1P63261 375 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 QRFPP83859 136 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 PMPCAQ10713 525 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 POU4F3Q15319 338 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 LPAL2Q16609 132 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 RAET1LQ5VY80 246 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 ZNF767PQ75MW2 155 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 PAQR4Q8N4S7 273 aaPredicted RBP12.4□□□□□ -0.42
LIMK1-208ENST00000538333 OR1M1Q8NGA1 313 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 OR51E1Q8TCB6 317 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 SNAPC3Q92966 411 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 TMEM41AQ96HV5 264 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 GINS4Q9BRT9 223 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 TMEM138Q9NPI0 162 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 GLTPQ9NZD2 209 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 ZNF319Q9P2F9 582 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 MYEF2Q9P2K5 600 aaKnown RBP12.4□□□□□ -0.42
LIMK1-208ENST00000538333 NCKAP5O14513 1909 aa12.4□□□□□ -0.42
LIMK1-208ENST00000538333 PCSK5Q92824 1860 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 WIPF3A6NGB9 483 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 TLX3O43711 291 aaPredicted RBP12.39□□□□□ -0.43
LIMK1-208ENST00000538333 CREBL2O60519 120 aaPredicted RBP12.39□□□□□ -0.43
LIMK1-208ENST00000538333 STK17BO94768 372 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 ZNF17P17021 662 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 GNALP38405 381 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 PRKXP51817 358 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 ZNF121P58317 390 aaPredicted RBP12.39□□□□□ -0.43
LIMK1-208ENST00000538333 C6orf183Q5T699 404 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 TCEAL6Q6IPX3 200 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 STEAP1BQ6NZ63 245 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 ZNF627Q7L945 461 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 PPP1R32Q7Z5V6 425 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 GABRG1Q8N1C3 465 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 TMEM105Q8N8V8 129 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 OR8B12Q8NGG6 310 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 OR51S1Q8NGJ8 323 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 DVL3Q92997 716 aaPredicted RBP12.39□□□□□ -0.43
LIMK1-208ENST00000538333 TCEAL3Q969E4 200 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 GAL3ST1Q99999 423 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 UQCC2Q9BRT2 126 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 SOX7Q9BT81 388 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 CA10Q9NS85 328 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 PIPOXQ9P0Z9 390 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 FBXO4Q9UKT5 387 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 ELF5Q9UKW6 265 aaPredicted RBP12.39□□□□□ -0.43
LIMK1-208ENST00000538333 EIF1BO60739 113 aaKnown RBP12.39□□□□□ -0.43
LIMK1-208ENST00000538333 IGHEP01854 428 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 CD63P08962 238 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 RPS18P62269 152 aaKnown RBP12.39□□□□□ -0.43
LIMK1-208ENST00000538333 Q0VFX4 171 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 UNC119Q13432 240 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 PHYHD1Q5SRE7 291 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 C10orf128Q5T292 105 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 DCAF12Q5T6F0 453 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 SLC22A24Q8N4F4 322 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 TMEM229BQ8NBD8 167 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 OR5D14Q8NGL3 314 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 OR2T35Q8NGX2 323 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 TMEM54Q969K7 222 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 ZNF385AQ96PM9 386 aaKnown RBP12.39□□□□□ -0.43
LIMK1-208ENST00000538333 UCN2Q96RP3 112 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 HEXA-AS1Q9H8Q6 139 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 GPN1Q9HCN4 374 aaPredicted RBP12.39□□□□□ -0.43
LIMK1-208ENST00000538333 ZNF69Q9UC07 566 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 DKKL1Q9UK85 242 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 RAB22AQ9UL26 194 aa12.39□□□□□ -0.43
LIMK1-208ENST00000538333 ANKRD34BA5PLL1 514 aa12.38□□□□□ -0.43
LIMK1-208ENST00000538333 ERVH48-1M5A8F1 160 aa12.38□□□□□ -0.43
LIMK1-208ENST00000538333 RAB27BO00194 218 aa12.38□□□□□ -0.43
LIMK1-208ENST00000538333 TNFRSF10AO00220 468 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms