RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 FADS1O60427 444 aa12.56□□□□□ -0.4
CLPB-209ENST00000538039 TSPAN2O60636 221 aa12.56□□□□□ -0.4
CLPB-209ENST00000538039 OPN1LWP04000 364 aa12.56□□□□□ -0.4
CLPB-209ENST00000538039 EN2P19622 333 aaPredicted RBP12.56□□□□□ -0.4
CLPB-209ENST00000538039 IL13RA1P78552 427 aa12.56□□□□□ -0.4
CLPB-209ENST00000538039 PAN3Q58A45 887 aaKnown RBP12.56□□□□□ -0.4
CLPB-209ENST00000538039 C1orf100Q5SVJ3 147 aa12.56□□□□□ -0.4
CLPB-209ENST00000538039 C1orf140Q5VVS0 124 aa12.56□□□□□ -0.4
CLPB-209ENST00000538039 TMEM104Q8NE00 496 aa12.56□□□□□ -0.4
CLPB-209ENST00000538039 MARCH1Q8TCQ1 289 aa12.56□□□□□ -0.4
CLPB-209ENST00000538039 TLNRD1Q9H1K6 362 aa12.56□□□□□ -0.4
CLPB-209ENST00000538039 GAREM1Q9H706 876 aa12.56□□□□□ -0.4
CLPB-209ENST00000538039 CENPMQ9NSP4 180 aa12.56□□□□□ -0.4
CLPB-209ENST00000538039 HPF1Q9NWY4 346 aa12.56□□□□□ -0.4
CLPB-209ENST00000538039 SOHLH2Q9NX45 425 aa12.56□□□□□ -0.4
CLPB-209ENST00000538039 PIAS3Q9Y6X2 628 aa12.56□□□□□ -0.4
CLPB-209ENST00000538039 R4GMQ9 66 aa12.56□□□□□ -0.4
CLPB-209ENST00000538039 TMEM269A0A1B0GVZ9 245 aa12.55□□□□□ -0.4
CLPB-209ENST00000538039 C5orf63A6NC05 138 aa12.55□□□□□ -0.4
CLPB-209ENST00000538039 FRG2CA6NGY1 282 aa12.55□□□□□ -0.4
CLPB-209ENST00000538039 H3BMH7 237 aa12.55□□□□□ -0.4
CLPB-209ENST00000538039 ADAP1O75689 374 aa12.55□□□□□ -0.4
CLPB-209ENST00000538039 ATG12O94817 140 aa12.55□□□□□ -0.4
CLPB-209ENST00000538039 IL2RAP01589 272 aa12.55□□□□□ -0.4
CLPB-209ENST00000538039 FSTP19883 344 aa12.55□□□□□ -0.4
CLPB-209ENST00000538039 DNASE1L1P49184 302 aa12.55□□□□□ -0.4
CLPB-209ENST00000538039 PPM1FP49593 454 aaPredicted RBP12.55□□□□□ -0.4
CLPB-209ENST00000538039 ACOT7LQ6ZUV0 252 aa12.55□□□□□ -0.4
CLPB-209ENST00000538039 MAMDC2Q7Z304 686 aaPredicted RBP12.55□□□□□ -0.4
CLPB-209ENST00000538039 ZNF584Q8IVC4 421 aa12.55□□□□□ -0.4
CLPB-209ENST00000538039 PAQR8Q8TEZ7 354 aa12.55□□□□□ -0.4
CLPB-209ENST00000538039 MITD1Q8WV92 249 aa12.55□□□□□ -0.4
CLPB-209ENST00000538039 MYOZ1Q9NP98 299 aaPredicted RBP12.55□□□□□ -0.4
CLPB-209ENST00000538039 CYTL1Q9NRR1 136 aa12.55□□□□□ -0.4
CLPB-209ENST00000538039 PURGQ9UJV8 347 aaKnown RBP12.55□□□□□ -0.4
CLPB-209ENST00000538039 HS3ST3A1Q9Y663 406 aa12.55□□□□□ -0.4
CLPB-209ENST00000538039 IGKV3D-11A0A0A0MRZ8 115 aa12.55□□□□□ -0.4
CLPB-209ENST00000538039 F5H0A9 414 aaPredicted RBP12.55□□□□□ -0.4
CLPB-209ENST00000538039 SULT1C2O00338 296 aa12.55□□□□□ -0.4
CLPB-209ENST00000538039 STK17BO94768 372 aa12.55□□□□□ -0.4
CLPB-209ENST00000538039 ABCD3P28288 659 aa12.55□□□□□ -0.4
CLPB-209ENST00000538039 RABIFP47224 123 aa12.55□□□□□ -0.4
CLPB-209ENST00000538039 SSBP1Q04837 148 aaKnown RBP12.55□□□□□ -0.4
CLPB-209ENST00000538039 CCINQ13939 588 aa12.55□□□□□ -0.4
CLPB-209ENST00000538039 ZNF345Q14585 488 aa12.55□□□□□ -0.4
CLPB-209ENST00000538039 RSPO4Q2I0M5 234 aaPredicted RBP12.55□□□□□ -0.4
CLPB-209ENST00000538039 LANCL3Q6ZV70 420 aa12.55□□□□□ -0.4
CLPB-209ENST00000538039 ZSCAN4Q8NAM6 433 aaPredicted RBP12.55□□□□□ -0.4
CLPB-209ENST00000538039 ELP5Q8TE02 316 aa12.55□□□□□ -0.4
CLPB-209ENST00000538039 ASB17Q8WXJ9 295 aa12.55□□□□□ -0.4
CLPB-209ENST00000538039 TCTN2Q96GX1 697 aa12.55□□□□□ -0.4
CLPB-209ENST00000538039 ESRP2Q9H6T0 727 aaKnown RBP12.55□□□□□ -0.4
CLPB-209ENST00000538039 TMEM218A2RU14 115 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 TTLL8A6PVC2 850 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 RAD51DO75771 328 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 OR2F2O95006 317 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 TTRP02766 147 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 MYF5P13349 255 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 RORAP35398 523 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 CAPZBP47756 277 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 FOXK1P85037 733 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 OR2F1Q13607 317 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 PLAC9Q5JTB6 97 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 DTX1Q86Y01 620 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 SLC46A1Q96NT5 459 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 CCNL2Q96S94 520 aaPredicted RBP12.54□□□□□ -0.4
CLPB-209ENST00000538039 ZNF768Q9H5H4 540 aaKnown RBP12.54□□□□□ -0.4
CLPB-209ENST00000538039 ZNF319Q9P2F9 582 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 HHLA2Q9UM44 414 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 CSAG2Q9Y5P2 127 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 ABCA7Q8IZY2 2146 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 FRYQ5TBA9 3013 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 FTCDNL1E5RQL4 147 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 PHYHO14832 338 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 BCKDHBP21953 392 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 SERPINF1P36955 418 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 PNLIPRP2P54317 469 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 MST1LQ2TV78 715 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 HFEQ30201 348 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.54□□□□□ -0.4
CLPB-209ENST00000538039 TMEM230Q96A57 120 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 NUDT22Q9BRQ3 303 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 DNTTIP1Q9H147 329 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 UPB1Q9UBR1 384 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 CKLFQ9UBR5 152 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 FAM96BQ9Y3D0 163 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 CABIN1Q9Y6J0 2220 aa12.54□□□□□ -0.4
CLPB-209ENST00000538039 A0A0B4J2A0 478 aa12.53□□□□□ -0.4
CLPB-209ENST00000538039 SLC2A1P11166 492 aa12.53□□□□□ -0.4
CLPB-209ENST00000538039 NFYBP25208 207 aa12.53□□□□□ -0.4
CLPB-209ENST00000538039 NPBWR1P48145 328 aa12.53□□□□□ -0.4
CLPB-209ENST00000538039 MFAP5Q13361 173 aa12.53□□□□□ -0.4
CLPB-209ENST00000538039 RNASE10Q5GAN6 216 aaKnown RBP12.53□□□□□ -0.4
CLPB-209ENST00000538039 SHEQ5VZ18 495 aa12.53□□□□□ -0.4
CLPB-209ENST00000538039 TMED6Q8WW62 240 aa12.53□□□□□ -0.4
CLPB-209ENST00000538039 SCPEP1Q9HB40 452 aa12.53□□□□□ -0.4
CLPB-209ENST00000538039 SHPKQ9UHJ6 478 aa12.53□□□□□ -0.4
CLPB-209ENST00000538039 DBX1A6NMT0 343 aa12.53□□□□□ -0.4
CLPB-209ENST00000538039 ALG1L2C9J202 215 aa12.53□□□□□ -0.4
CLPB-209ENST00000538039 PRAMEF26H0Y7S4 382 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms