RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 CPED1A4D0V7 1026 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 OR14I1A6ND48 311 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 OR5H14A6NHG9 310 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 NPIPB13A6NJU9 1138 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 NPIPB4C9JG80 1138 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 CCSO14618 274 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 SYT7O43581 403 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 CD8AP01732 235 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 HSD11B1P28845 292 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 AGTR1P30556 359 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 CXADRP78310 365 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 UNC119Q13432 240 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 MEF2DQ14814 521 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 C3orf33Q6P1S2 294 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 KLHL24Q6TFL4 600 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 ZBTB8AQ96BR9 441 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 ADAT3Q96EY9 351 aaPredicted RBP12.76□□□□□ -0.37
USP44-203ENST00000537435 FOXQ1Q9C009 403 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 PTGES2Q9H7Z7 377 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 ATXN7L1Q9ULK2 861 aaPredicted RBP12.76□□□□□ -0.37
USP44-203ENST00000537435 LIPT2A6NK58 231 aa12.75□□□□□ -0.37
USP44-203ENST00000537435 VSTM2BA6NLU5 285 aa12.75□□□□□ -0.37
USP44-203ENST00000537435 KRBOX1C9JBD0 128 aa12.75□□□□□ -0.37
USP44-203ENST00000537435 FGF2P09038 288 aa12.75□□□□□ -0.37
USP44-203ENST00000537435 PRKACBP22694 351 aa12.75□□□□□ -0.37
USP44-203ENST00000537435 CAPZA1P52907 286 aa12.75□□□□□ -0.37
USP44-203ENST00000537435 SUMO3P55854 103 aaPredicted RBP12.75□□□□□ -0.37
USP44-203ENST00000537435 SLC22A6Q4U2R8 563 aa12.75□□□□□ -0.37
USP44-203ENST00000537435 OR52W1Q6IF63 320 aa12.75□□□□□ -0.37
USP44-203ENST00000537435 LIN54Q6MZP7 749 aa12.75□□□□□ -0.37
USP44-203ENST00000537435 ANKRD37Q7Z713 158 aa12.75□□□□□ -0.37
USP44-203ENST00000537435 RELL2Q8NC24 303 aaPredicted RBP12.75□□□□□ -0.37
USP44-203ENST00000537435 BVESQ8NE79 360 aa12.75□□□□□ -0.37
USP44-203ENST00000537435 OR1M1Q8NGA1 313 aa12.75□□□□□ -0.37
USP44-203ENST00000537435 NUDCD2Q8WVJ2 157 aa12.75□□□□□ -0.37
USP44-203ENST00000537435 PRRT1Q99946 306 aa12.75□□□□□ -0.37
USP44-203ENST00000537435 PDCD10Q9BUL8 212 aa12.75□□□□□ -0.37
USP44-203ENST00000537435 PBOV1Q9GZY1 135 aa12.75□□□□□ -0.37
USP44-203ENST00000537435 SERINC1Q9NRX5 453 aa12.75□□□□□ -0.37
USP44-203ENST00000537435 SLC2A8Q9NY64 477 aa12.75□□□□□ -0.37
USP44-203ENST00000537435 MTCH2Q9Y6C9 303 aa12.75□□□□□ -0.37
USP44-203ENST00000537435 ABCA7Q8IZY2 2146 aa12.75□□□□□ -0.37
USP44-203ENST00000537435 ZNF208O43345 1280 aa12.74□□□□□ -0.37
USP44-203ENST00000537435 MGMTP16455 207 aa12.74□□□□□ -0.37
USP44-203ENST00000537435 FGL1Q08830 312 aa12.74□□□□□ -0.37
USP44-203ENST00000537435 LRRC37A5PQ49AS3 106 aa12.74□□□□□ -0.37
USP44-203ENST00000537435 TMEM81Q6P7N7 255 aa12.74□□□□□ -0.37
USP44-203ENST00000537435 KMT5CQ86Y97 462 aa12.74□□□□□ -0.37
USP44-203ENST00000537435 SLC25A45Q8N413 288 aa12.74□□□□□ -0.37
USP44-203ENST00000537435 NFAM1Q8NET5 270 aaPredicted RBP12.74□□□□□ -0.37
USP44-203ENST00000537435 OR10S1Q8NGN2 331 aa12.74□□□□□ -0.37
USP44-203ENST00000537435 ST8SIA2Q92186 375 aa12.74□□□□□ -0.37
USP44-203ENST00000537435 ZNF576Q9H609 170 aa12.74□□□□□ -0.37
USP44-203ENST00000537435 ALKBH4Q9NXW9 302 aa12.74□□□□□ -0.37
USP44-203ENST00000537435 CYB5R1Q9UHQ9 305 aa12.74□□□□□ -0.37
USP44-203ENST00000537435 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.74□□□□□ -0.37
USP44-203ENST00000537435 A0A0D9SG52 128 aa12.74□□□□□ -0.37
USP44-203ENST00000537435 VSIG8P0DPA2 414 aa12.74□□□□□ -0.37
USP44-203ENST00000537435 FOSL2P15408 326 aa12.74□□□□□ -0.37
USP44-203ENST00000537435 QRFPP83859 136 aa12.74□□□□□ -0.37
USP44-203ENST00000537435 COL19A1Q14993 1142 aa12.74□□□□□ -0.37
USP44-203ENST00000537435 LPCAT3Q6P1A2 487 aa12.74□□□□□ -0.37
USP44-203ENST00000537435 HSD17B13Q7Z5P4 300 aaPredicted RBP12.74□□□□□ -0.37
USP44-203ENST00000537435 SLC22A24Q8N4F4 322 aa12.74□□□□□ -0.37
USP44-203ENST00000537435 OR13C9Q8NGT0 318 aa12.74□□□□□ -0.37
USP44-203ENST00000537435 MRGPRFQ96AM1 343 aa12.74□□□□□ -0.37
USP44-203ENST00000537435 SEC22AQ96IW7 307 aa12.74□□□□□ -0.37
USP44-203ENST00000537435 TGIF2Q9GZN2 237 aa12.74□□□□□ -0.37
USP44-203ENST00000537435 SHARPINQ9H0F6 387 aa12.74□□□□□ -0.37
USP44-203ENST00000537435 KLRF1Q9NZS2 232 aa12.74□□□□□ -0.37
USP44-203ENST00000537435 GPN3Q9UHW5 284 aaPredicted RBP12.74□□□□□ -0.37
USP44-203ENST00000537435 B3GALT5Q9Y2C3 310 aa12.74□□□□□ -0.37
USP44-203ENST00000537435 TMEM200CA6NKL6 621 aa12.73□□□□□ -0.37
USP44-203ENST00000537435 EFNA2O43921 213 aa12.73□□□□□ -0.37
USP44-203ENST00000537435 HPP00738 406 aa12.73□□□□□ -0.37
USP44-203ENST00000537435 HEXBP07686 556 aa12.73□□□□□ -0.37
USP44-203ENST00000537435 UBBP0CG47 229 aa12.73□□□□□ -0.37
USP44-203ENST00000537435 GNB3P16520 340 aa12.73□□□□□ -0.37
USP44-203ENST00000537435 ZBTB25P24278 435 aa12.73□□□□□ -0.37
USP44-203ENST00000537435 CLDN6P56747 220 aa12.73□□□□□ -0.37
USP44-203ENST00000537435 RPS27AP62979 156 aaKnown RBP12.73□□□□□ -0.37
USP44-203ENST00000537435 UBA52P62987 128 aaKnown RBP12.73□□□□□ -0.37
USP44-203ENST00000537435 SRSF4Q08170 494 aaKnown RBP12.73□□□□□ -0.37
USP44-203ENST00000537435 BTN1A1Q13410 526 aa12.73□□□□□ -0.37
USP44-203ENST00000537435 PPP1R1AQ13522 171 aa12.73□□□□□ -0.37
USP44-203ENST00000537435 TAF13Q15543 124 aa12.73□□□□□ -0.37
USP44-203ENST00000537435 RHBDD2Q6NTF9 364 aa12.73□□□□□ -0.37
USP44-203ENST00000537435 C11orf87Q6NUJ2 197 aa12.73□□□□□ -0.37
USP44-203ENST00000537435 LYG2Q86SG7 212 aa12.73□□□□□ -0.37
USP44-203ENST00000537435 SLC25A42Q86VD7 318 aa12.73□□□□□ -0.37
USP44-203ENST00000537435 SLC38A9Q8NBW4 561 aa12.73□□□□□ -0.37
USP44-203ENST00000537435 CST11Q9H112 138 aa12.73□□□□□ -0.37
USP44-203ENST00000537435 PCED1AQ9H1Q7 454 aa12.73□□□□□ -0.37
USP44-203ENST00000537435 ZNF768Q9H5H4 540 aaKnown RBP12.73□□□□□ -0.37
USP44-203ENST00000537435 COMMD9Q9P000 198 aa12.73□□□□□ -0.37
USP44-203ENST00000537435 B3GAT1Q9P2W7 334 aa12.73□□□□□ -0.37
USP44-203ENST00000537435 GPR160Q9UJ42 338 aa12.73□□□□□ -0.37
USP44-203ENST00000537435 TRBV11-1A0A0K0K1C0 115 aa12.73□□□□□ -0.37
USP44-203ENST00000537435 BPNT1O95861 308 aa12.73□□□□□ -0.37
USP44-203ENST00000537435 CD96P40200 585 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms