RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 FBXW12Q6X9E4 464 aa7.44□□□□□ -1.22
CPSF7-217ENST00000537162 LRRC74BQ6ZQY2 392 aa7.44□□□□□ -1.22
CPSF7-217ENST00000537162 ZNF575Q86XF7 245 aa7.44□□□□□ -1.22
CPSF7-217ENST00000537162 ARMC8Q8IUR7 673 aa7.44□□□□□ -1.22
CPSF7-217ENST00000537162 ZNF695Q8IW36 515 aa7.44□□□□□ -1.22
CPSF7-217ENST00000537162 Q8N1Y9 231 aa7.44□□□□□ -1.22
CPSF7-217ENST00000537162 CCNYL1Q8N7R7 359 aa7.44□□□□□ -1.22
CPSF7-217ENST00000537162 MAPKAPK5-AS1Q8N8E1 139 aa7.44□□□□□ -1.22
CPSF7-217ENST00000537162 OR4A15Q8NGL6 344 aa7.44□□□□□ -1.22
CPSF7-217ENST00000537162 OR52P1PQ8NH57 321 aa7.44□□□□□ -1.22
CPSF7-217ENST00000537162 ERGIC1Q969X5 290 aa7.44□□□□□ -1.22
CPSF7-217ENST00000537162 DUS3LQ96G46 650 aaKnown RBP7.44□□□□□ -1.22
CPSF7-217ENST00000537162 PBKQ96KB5 322 aa7.44□□□□□ -1.22
CPSF7-217ENST00000537162 ZNF583Q96ND8 569 aa7.44□□□□□ -1.22
CPSF7-217ENST00000537162 WDR76Q9H967 626 aa7.44□□□□□ -1.22
CPSF7-217ENST00000537162 ELL3Q9HB65 397 aaPredicted RBP7.44□□□□□ -1.22
CPSF7-217ENST00000537162 SLCO1B3Q9NPD5 702 aa7.44□□□□□ -1.22
CPSF7-217ENST00000537162 TMEM100Q9NV29 134 aa7.44□□□□□ -1.22
CPSF7-217ENST00000537162 VSX1Q9NZR4 365 aaPredicted RBP7.44□□□□□ -1.22
CPSF7-217ENST00000537162 PITPNC1Q9UKF7 332 aa7.44□□□□□ -1.22
CPSF7-217ENST00000537162 ZNF443Q9Y2A4 671 aaPredicted RBP7.44□□□□□ -1.22
CPSF7-217ENST00000537162 DNAH6Q9C0G6 4158 aa7.44□□□□□ -1.22
CPSF7-217ENST00000537162 A0A1B0GWA3 101 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 PSMB11A5LHX3 300 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 IQCF6A8MYZ5 107 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 BRI3O95415 125 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 AMY1AP04745 511 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 AMY2AP04746 511 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 SCG5P05408 212 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 ETFAP13804 333 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 TUBG1P23258 451 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 COX7A1P24310 79 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 HTR2AP28223 471 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 ZNF133P52736 654 aaPredicted RBP7.43□□□□□ -1.22
CPSF7-217ENST00000537162 MRPS25P82663 173 aaKnown RBP7.43□□□□□ -1.22
CPSF7-217ENST00000537162 DR1Q01658 176 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 ENDOGQ14249 297 aaKnown RBP7.43□□□□□ -1.22
CPSF7-217ENST00000537162 PGS1Q32NB8 556 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 LIN52Q52LA3 116 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 BEND6Q5SZJ8 279 aaPredicted RBP7.43□□□□□ -1.22
CPSF7-217ENST00000537162 C10orf128Q5T292 105 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 FAM27BQ5VT28 67 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 RNLSQ5VYX0 342 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 TEX36Q5VZQ5 186 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 OR4F3Q6IEY1 312 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 ANKRD46Q86W74 232 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 RIMKLAQ8IXN7 391 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 ALDH16A1Q8IZ83 802 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 C10orf53Q8N6V4 93 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 CELF2-AS1Q8N7Q2 184 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 NOXO1Q8NFA2 376 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 ACTRT1Q8TDG2 376 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 BCAS4Q8TDM0 211 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 CCDC115Q96NT0 180 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 SEPHS2Q99611 448 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 WACQ9BTA9 647 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 C1orf50Q9BV19 199 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 SPATA9Q9BWV2 254 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 TUBG2Q9NRH3 451 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 ABCB10Q9NRK6 738 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 C1orf123Q9NWV4 160 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 FIS1Q9Y3D6 152 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 TIMM10BQ9Y5J6 103 aa7.43□□□□□ -1.22
CPSF7-217ENST00000537162 A0A1W2PQ09 198 aa7.42□□□□□ -1.22
CPSF7-217ENST00000537162 H0YAE9 185 aa7.42□□□□□ -1.22
CPSF7-217ENST00000537162 NDUFB3O43676 98 aa7.42□□□□□ -1.22
CPSF7-217ENST00000537162 TRMUO75648 421 aaKnown RBP7.42□□□□□ -1.22
CPSF7-217ENST00000537162 IGHG1P01857 330 aa7.42□□□□□ -1.22
CPSF7-217ENST00000537162 ETS2P15036 469 aa7.42□□□□□ -1.22
CPSF7-217ENST00000537162 TAC1P20366 129 aa7.42□□□□□ -1.22
CPSF7-217ENST00000537162 ATP5F1P24539 256 aaPredicted RBP7.42□□□□□ -1.22
CPSF7-217ENST00000537162 RPL3P39023 403 aaKnown RBP7.42□□□□□ -1.22
CPSF7-217ENST00000537162 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.42□□□□□ -1.22
CPSF7-217ENST00000537162 PMS2P11Q13670 270 aa7.42□□□□□ -1.22
CPSF7-217ENST00000537162 KRT72Q14CN4 511 aa7.42□□□□□ -1.22
CPSF7-217ENST00000537162 SSX2Q16385 188 aa7.42□□□□□ -1.22
CPSF7-217ENST00000537162 FAM27D1Q5T7N8 215 aa7.42□□□□□ -1.22
CPSF7-217ENST00000537162 RNF220Q5VTB9 566 aa7.42□□□□□ -1.22
CPSF7-217ENST00000537162 C5orf46Q6UWT4 87 aa7.42□□□□□ -1.22
CPSF7-217ENST00000537162 CBLL1Q75N03 491 aa7.42□□□□□ -1.22
CPSF7-217ENST00000537162 PIGWQ7Z7B1 504 aa7.42□□□□□ -1.22
CPSF7-217ENST00000537162 PEX5LQ8IYB4 626 aa7.42□□□□□ -1.22
CPSF7-217ENST00000537162 OR5J2Q8NH18 312 aa7.42□□□□□ -1.22
CPSF7-217ENST00000537162 NMD3Q96D46 503 aaKnown RBP7.42□□□□□ -1.22
CPSF7-217ENST00000537162 MARCOQ9UEW3 520 aaPredicted RBP7.42□□□□□ -1.22
CPSF7-217ENST00000537162 PRDM4Q9UKN5 801 aa7.42□□□□□ -1.22
CPSF7-217ENST00000537162 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.41□□□□□ -1.22
CPSF7-217ENST00000537162 EIF3HO15372 352 aaKnown RBP eCLIP7.41□□□□□ -1.22
CPSF7-217ENST00000537162 RHBDL1O75783 438 aa7.41□□□□□ -1.22
CPSF7-217ENST00000537162 CPSF4O95639 269 aaKnown RBP7.41□□□□□ -1.22
CPSF7-217ENST00000537162 GSTA1P08263 222 aa7.41□□□□□ -1.22
CPSF7-217ENST00000537162 DBHP09172 617 aa7.41□□□□□ -1.22
CPSF7-217ENST00000537162 CST2P09228 141 aa7.41□□□□□ -1.22
CPSF7-217ENST00000537162 CD24P25063 80 aa7.41□□□□□ -1.22
CPSF7-217ENST00000537162 SLC6A1P30531 599 aa7.41□□□□□ -1.22
CPSF7-217ENST00000537162 CHI3L1P36222 383 aaPredicted RBP7.41□□□□□ -1.22
CPSF7-217ENST00000537162 MAGEA4P43358 317 aa7.41□□□□□ -1.22
CPSF7-217ENST00000537162 OR3A4PP47883 348 aa7.41□□□□□ -1.22
CPSF7-217ENST00000537162 TGM4P49221 684 aa7.41□□□□□ -1.22
CPSF7-217ENST00000537162 GSK3BP49841 420 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms