RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 PLIN3O60664 434 aa1.69□□□□□ -2.14
CCDC7-208ENST00000537047 PALMO75781 387 aa1.69□□□□□ -2.14
CCDC7-208ENST00000537047 ZNF24P17028 368 aa1.69□□□□□ -2.14
CCDC7-208ENST00000537047 ZNF43P17038 809 aa1.69□□□□□ -2.14
CCDC7-208ENST00000537047 MPV17P39210 176 aa1.69□□□□□ -2.14
CCDC7-208ENST00000537047 TNNT2P45379 298 aaPredicted RBP1.69□□□□□ -2.14
CCDC7-208ENST00000537047 ACTR1AP61163 376 aa1.69□□□□□ -2.14
CCDC7-208ENST00000537047 DMC1Q14565 340 aa1.69□□□□□ -2.14
CCDC7-208ENST00000537047 PPM1LQ5SGD2 360 aa1.69□□□□□ -2.14
CCDC7-208ENST00000537047 RNASEKQ6P5S7 137 aaKnown RBP1.69□□□□□ -2.14
CCDC7-208ENST00000537047 CASC1Q6TDU7 716 aa1.69□□□□□ -2.14
CCDC7-208ENST00000537047 TMEM107Q6UX40 140 aa1.69□□□□□ -2.14
CCDC7-208ENST00000537047 RGS9BPQ6ZS82 235 aa1.69□□□□□ -2.14
CCDC7-208ENST00000537047 CBR4Q8N4T8 237 aa1.69□□□□□ -2.14
CCDC7-208ENST00000537047 OR5T1Q8NG75 326 aa1.69□□□□□ -2.14
CCDC7-208ENST00000537047 OR1J4Q8NGS1 313 aa1.69□□□□□ -2.14
CCDC7-208ENST00000537047 RAB3IL1Q8TBN0 382 aa1.69□□□□□ -2.14
CCDC7-208ENST00000537047 SLC29A1Q99808 456 aa1.69□□□□□ -2.14
CCDC7-208ENST00000537047 TMEM27Q9HBJ8 222 aa1.69□□□□□ -2.14
CCDC7-208ENST00000537047 LGALS13Q9UHV8 139 aa1.69□□□□□ -2.14
CCDC7-208ENST00000537047 A0A1W2PNN7 141 aa1.68□□□□□ -2.14
CCDC7-208ENST00000537047 SMCO2A6NFE2 343 aa1.68□□□□□ -2.14
CCDC7-208ENST00000537047 CEACAM18A8MTB9 384 aa1.68□□□□□ -2.14
CCDC7-208ENST00000537047 H7C417 338 aa1.68□□□□□ -2.14
CCDC7-208ENST00000537047 GLSO94925 669 aaPredicted RBP1.68□□□□□ -2.14
CCDC7-208ENST00000537047 ARG1P05089 322 aa1.68□□□□□ -2.14
CCDC7-208ENST00000537047 ANXA5P08758 320 aa1.68□□□□□ -2.14
CCDC7-208ENST00000537047 SLC2A3P11169 496 aa1.68□□□□□ -2.14
CCDC7-208ENST00000537047 LOXP28300 417 aaPredicted RBP1.68□□□□□ -2.14
CCDC7-208ENST00000537047 IDH2P48735 452 aaKnown RBP1.68□□□□□ -2.14
CCDC7-208ENST00000537047 ACLYP53396 1101 aa1.68□□□□□ -2.14
CCDC7-208ENST00000537047 RPS23P62266 143 aaKnown RBP1.68□□□□□ -2.14
CCDC7-208ENST00000537047 CYP24A1Q07973 514 aa1.68□□□□□ -2.14
CCDC7-208ENST00000537047 MAD2L1BPQ15013 274 aaPredicted RBP1.68□□□□□ -2.14
CCDC7-208ENST00000537047 RBMY1FQ15415 496 aaKnown RBP1.68□□□□□ -2.14
CCDC7-208ENST00000537047 ZNF726P1Q15940 193 aa1.68□□□□□ -2.14
CCDC7-208ENST00000537047 SSX2Q16385 188 aa1.68□□□□□ -2.14
CCDC7-208ENST00000537047 CENPPQ6IPU0 288 aa1.68□□□□□ -2.14
CCDC7-208ENST00000537047 CERS6Q6ZMG9 384 aa1.68□□□□□ -2.14
CCDC7-208ENST00000537047 ERO1BQ86YB8 467 aa1.68□□□□□ -2.14
CCDC7-208ENST00000537047 ZNF101Q8IZC7 436 aa1.68□□□□□ -2.14
CCDC7-208ENST00000537047 SLC35G3Q8N808 338 aa1.68□□□□□ -2.14
CCDC7-208ENST00000537047 PRELID2Q8N945 189 aa1.68□□□□□ -2.14
CCDC7-208ENST00000537047 OR10G6Q8NH81 332 aa1.68□□□□□ -2.14
CCDC7-208ENST00000537047 PHOSPHO2Q8TCD6 241 aa1.68□□□□□ -2.14
CCDC7-208ENST00000537047 APH1BQ8WW43 257 aa1.68□□□□□ -2.14
CCDC7-208ENST00000537047 DHX35Q9H5Z1 703 aaKnown RBP1.68□□□□□ -2.14
CCDC7-208ENST00000537047 CSNK1G1Q9HCP0 422 aa1.68□□□□□ -2.14
CCDC7-208ENST00000537047 MYOZ1Q9NP98 299 aaPredicted RBP1.68□□□□□ -2.14
CCDC7-208ENST00000537047 MED4Q9NPJ6 270 aa1.68□□□□□ -2.14
CCDC7-208ENST00000537047 MTFP1Q9UDX5 166 aa1.68□□□□□ -2.14
CCDC7-208ENST00000537047 SIGLEC7Q9Y286 467 aa1.68□□□□□ -2.14
CCDC7-208ENST00000537047 SYCE1LA8MT33 242 aa1.67□□□□□ -2.14
CCDC7-208ENST00000537047 ASGR1P07306 291 aa1.67□□□□□ -2.14
CCDC7-208ENST00000537047 LGALS3P17931 250 aaKnown RBP1.67□□□□□ -2.14
CCDC7-208ENST00000537047 EIF2S2P20042 333 aaKnown RBP1.67□□□□□ -2.14
CCDC7-208ENST00000537047 GFERP55789 205 aa1.67□□□□□ -2.14
CCDC7-208ENST00000537047 EIF3EP60228 445 aaKnown RBP1.67□□□□□ -2.14
CCDC7-208ENST00000537047 PRR3P79522 188 aaKnown RBP1.67□□□□□ -2.14
CCDC7-208ENST00000537047 BST1Q10588 318 aa1.67□□□□□ -2.14
CCDC7-208ENST00000537047 DDX39BQ13838 428 aaKnown RBP1.67□□□□□ -2.14
CCDC7-208ENST00000537047 ZNF235Q14590 738 aa1.67□□□□□ -2.14
CCDC7-208ENST00000537047 IHHQ14623 411 aa1.67□□□□□ -2.14
CCDC7-208ENST00000537047 PSMD5Q16401 504 aa1.67□□□□□ -2.14
CCDC7-208ENST00000537047 ANKDD1AQ495B1 522 aa1.67□□□□□ -2.14
CCDC7-208ENST00000537047 MED27Q6P2C8 311 aa1.67□□□□□ -2.14
CCDC7-208ENST00000537047 C16orf47Q6ZP98 133 aaPredicted RBP1.67□□□□□ -2.14
CCDC7-208ENST00000537047 TMEM136Q6ZRR5 245 aa1.67□□□□□ -2.14
CCDC7-208ENST00000537047 LINC00336Q6ZUF6 198 aa1.67□□□□□ -2.14
CCDC7-208ENST00000537047 SGPP2Q8IWX5 399 aa1.67□□□□□ -2.14
CCDC7-208ENST00000537047 KIFAP3Q92845 792 aa1.67□□□□□ -2.14
CCDC7-208ENST00000537047 DENND4AQ7Z401 1863 aa1.67□□□□□ -2.14
CCDC7-208ENST00000537047 SCN4AP35499 1836 aa1.66□□□□□ -2.14
CCDC7-208ENST00000537047 IGHV3-72A0A0B4J1Y9 119 aa1.66□□□□□ -2.14
CCDC7-208ENST00000537047 IGHV1-69DA0A0B4J2H0 117 aa1.66□□□□□ -2.14
CCDC7-208ENST00000537047 A0A1B0GW55 424 aa1.66□□□□□ -2.14
CCDC7-208ENST00000537047 SMKR1H3BMG3 65 aa1.66□□□□□ -2.14
CCDC7-208ENST00000537047 J3QRE1 110 aa1.66□□□□□ -2.14
CCDC7-208ENST00000537047 MFNGO00587 321 aa1.66□□□□□ -2.14
CCDC7-208ENST00000537047 RAD51CO43502 376 aa1.66□□□□□ -2.14
CCDC7-208ENST00000537047 CNMDO75829 334 aa1.66□□□□□ -2.14
CCDC7-208ENST00000537047 GATBO75879 557 aaKnown RBP1.66□□□□□ -2.14
CCDC7-208ENST00000537047 SERPINA3P01011 423 aa1.66□□□□□ -2.14
CCDC7-208ENST00000537047 CST1P01037 141 aa1.66□□□□□ -2.14
CCDC7-208ENST00000537047 DUX4L2P0CJ85 424 aa1.66□□□□□ -2.14
CCDC7-208ENST00000537047 DUX4L3P0CJ86 424 aa1.66□□□□□ -2.14
CCDC7-208ENST00000537047 DUX4L5P0CJ88 424 aa1.66□□□□□ -2.14
CCDC7-208ENST00000537047 DUX4L6P0CJ89 424 aa1.66□□□□□ -2.14
CCDC7-208ENST00000537047 DUX4L7P0CJ90 424 aa1.66□□□□□ -2.14
CCDC7-208ENST00000537047 ATF6P18850 670 aa1.66□□□□□ -2.14
CCDC7-208ENST00000537047 IL32P24001 234 aa1.66□□□□□ -2.14
CCDC7-208ENST00000537047 RRM2P31350 389 aa1.66□□□□□ -2.14
CCDC7-208ENST00000537047 SLC1A1P43005 524 aa1.66□□□□□ -2.14
CCDC7-208ENST00000537047 SYKP43405 635 aa1.66□□□□□ -2.14
CCDC7-208ENST00000537047 GALR1P47211 349 aa1.66□□□□□ -2.14
CCDC7-208ENST00000537047 PSMD8P48556 350 aa1.66□□□□□ -2.14
CCDC7-208ENST00000537047 UBE2E1P51965 193 aa1.66□□□□□ -2.14
CCDC7-208ENST00000537047 SP4Q02446 784 aa1.66□□□□□ -2.14
CCDC7-208ENST00000537047 ART3Q13508 389 aa1.66□□□□□ -2.14
CCDC7-208ENST00000537047 SOHLH1Q5JUK2 328 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms