RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 SPRNQ5BIV9 151 aa11.05□□□□□ -0.64
RTN3-207ENST00000536011 HIST2H3PS2Q5TEC6 136 aa11.05□□□□□ -0.64
RTN3-207ENST00000536011 OR2T2Q6IF00 324 aa11.05□□□□□ -0.64
RTN3-207ENST00000536011 RPL13AP3Q6NVV1 102 aa11.05□□□□□ -0.64
RTN3-207ENST00000536011 HIST2H3AQ71DI3 136 aa11.05□□□□□ -0.64
RTN3-207ENST00000536011 CPLX4Q7Z7G2 160 aa11.05□□□□□ -0.64
RTN3-207ENST00000536011 RNF148Q8N7C7 305 aa11.05□□□□□ -0.64
RTN3-207ENST00000536011 FAM86B1Q8N7N1 296 aa11.05□□□□□ -0.64
RTN3-207ENST00000536011 SLC26A10Q8NG04 563 aa11.05□□□□□ -0.64
RTN3-207ENST00000536011 OR10AD1Q8NGE0 317 aa11.05□□□□□ -0.64
RTN3-207ENST00000536011 PLEKHA8Q96JA3 519 aa11.05□□□□□ -0.64
RTN3-207ENST00000536011 NSMCE2Q96MF7 247 aa11.05□□□□□ -0.64
RTN3-207ENST00000536011 PITX2Q99697 317 aa11.05□□□□□ -0.64
RTN3-207ENST00000536011 FUZQ9BT04 418 aa11.05□□□□□ -0.64
RTN3-207ENST00000536011 FAM107BQ9H098 131 aa11.05□□□□□ -0.64
RTN3-207ENST00000536011 OR52D1Q9H346 318 aa11.05□□□□□ -0.64
RTN3-207ENST00000536011 GCM1Q9NP62 436 aa11.05□□□□□ -0.64
RTN3-207ENST00000536011 DCAF16Q9NXF7 216 aa11.05□□□□□ -0.64
RTN3-207ENST00000536011 KCNG2Q9UJ96 466 aa11.05□□□□□ -0.64
RTN3-207ENST00000536011 B9D1Q9UPM9 204 aa11.05□□□□□ -0.64
RTN3-207ENST00000536011 V9GYQ6 96 aa11.05□□□□□ -0.64
RTN3-207ENST00000536011 IQCF6A8MYZ5 107 aa11.04□□□□□ -0.64
RTN3-207ENST00000536011 F5H0A9 414 aaPredicted RBP11.04□□□□□ -0.64
RTN3-207ENST00000536011 ATP8B1O43520 1251 aa11.04□□□□□ -0.64
RTN3-207ENST00000536011 FSTL3O95633 263 aa11.04□□□□□ -0.64
RTN3-207ENST00000536011 HLA-DQA2P01906 255 aa11.04□□□□□ -0.64
RTN3-207ENST00000536011 IRF2P14316 349 aa11.04□□□□□ -0.64
RTN3-207ENST00000536011 RPS2P15880 293 aaKnown RBP11.04□□□□□ -0.64
RTN3-207ENST00000536011 ZNF12P17014 697 aa11.04□□□□□ -0.64
RTN3-207ENST00000536011 ZFP36P26651 326 aaKnown RBP11.04□□□□□ -0.64
RTN3-207ENST00000536011 ZNF154Q13106 437 aa11.04□□□□□ -0.64
RTN3-207ENST00000536011 HLXQ14774 488 aaPredicted RBP11.04□□□□□ -0.64
RTN3-207ENST00000536011 MEP1BQ16820 701 aa11.04□□□□□ -0.64
RTN3-207ENST00000536011 ZNF181Q2M3W8 571 aa11.04□□□□□ -0.64
RTN3-207ENST00000536011 OTPQ5XKR4 325 aa11.04□□□□□ -0.64
RTN3-207ENST00000536011 BTNL3Q6UXE8 466 aa11.04□□□□□ -0.64
RTN3-207ENST00000536011 NLRC3Q7RTR2 1065 aa11.04□□□□□ -0.64
RTN3-207ENST00000536011 PGAM4Q8N0Y7 254 aa11.04□□□□□ -0.64
RTN3-207ENST00000536011 LINC00471Q8N535 108 aa11.04□□□□□ -0.64
RTN3-207ENST00000536011 DEFB108BQ8NET1 73 aa11.04□□□□□ -0.64
RTN3-207ENST00000536011 OR52L1Q8NGH7 329 aa11.04□□□□□ -0.64
RTN3-207ENST00000536011 MEGF10Q96KG7 1140 aa11.04□□□□□ -0.64
RTN3-207ENST00000536011 TSSK2Q96PF2 358 aa11.04□□□□□ -0.64
RTN3-207ENST00000536011 SIGLEC11Q96RL6 698 aa11.04□□□□□ -0.64
RTN3-207ENST00000536011 NMNAT3Q96T66 252 aa11.04□□□□□ -0.64
RTN3-207ENST00000536011 ATF6BQ99941 703 aa11.04□□□□□ -0.64
RTN3-207ENST00000536011 SLC30A2Q9BRI3 323 aa11.04□□□□□ -0.64
RTN3-207ENST00000536011 C1QTNF5Q9BXJ0 243 aa11.04□□□□□ -0.64
RTN3-207ENST00000536011 SRA1Q9HD15 236 aaKnown RBP11.04□□□□□ -0.64
RTN3-207ENST00000536011 RPRD1BQ9NQG5 326 aaKnown RBP11.04□□□□□ -0.64
RTN3-207ENST00000536011 TMEM100Q9NV29 134 aa11.04□□□□□ -0.64
RTN3-207ENST00000536011 MIOXQ9UGB7 285 aa11.04□□□□□ -0.64
RTN3-207ENST00000536011 NUP50Q9UKX7 468 aa11.04□□□□□ -0.64
RTN3-207ENST00000536011 CEACAM18A8MTB9 384 aa11.03□□□□□ -0.64
RTN3-207ENST00000536011 DCTN6O00399 190 aa11.03□□□□□ -0.64
RTN3-207ENST00000536011 SNX3O60493 162 aa11.03□□□□□ -0.64
RTN3-207ENST00000536011 KRT36O76013 467 aa11.03□□□□□ -0.64
RTN3-207ENST00000536011 SEMG1P04279 462 aa11.03□□□□□ -0.64
RTN3-207ENST00000536011 HIST1H1CP16403 213 aaKnown RBP11.03□□□□□ -0.64
RTN3-207ENST00000536011 ERFP50548 548 aa11.03□□□□□ -0.64
RTN3-207ENST00000536011 TPTEP56180 551 aa11.03□□□□□ -0.64
RTN3-207ENST00000536011 UBA52P62987 128 aaKnown RBP11.03□□□□□ -0.64
RTN3-207ENST00000536011 SLC18B1Q6NT16 456 aa11.03□□□□□ -0.64
RTN3-207ENST00000536011 CORO6Q6QEF8 472 aa11.03□□□□□ -0.64
RTN3-207ENST00000536011 C16orf89Q6UX73 402 aa11.03□□□□□ -0.64
RTN3-207ENST00000536011 ZNF620Q6ZNG0 422 aa11.03□□□□□ -0.64
RTN3-207ENST00000536011 COLCA1Q6ZS62 124 aa11.03□□□□□ -0.64
RTN3-207ENST00000536011 ZBTB46Q86UZ6 589 aa11.03□□□□□ -0.64
RTN3-207ENST00000536011 OR6V1Q8N148 313 aa11.03□□□□□ -0.64
RTN3-207ENST00000536011 CELF2-AS1Q8N7Q2 184 aa11.03□□□□□ -0.64
RTN3-207ENST00000536011 BHLHE23Q8NDY6 225 aa11.03□□□□□ -0.64
RTN3-207ENST00000536011 OR11L1Q8NGX0 322 aa11.03□□□□□ -0.64
RTN3-207ENST00000536011 OR4K13Q8NH42 304 aa11.03□□□□□ -0.64
RTN3-207ENST00000536011 GNPDA2Q8TDQ7 276 aa11.03□□□□□ -0.64
RTN3-207ENST00000536011 SPTSSAQ969W0 71 aa11.03□□□□□ -0.64
RTN3-207ENST00000536011 ERGIC1Q969X5 290 aa11.03□□□□□ -0.64
RTN3-207ENST00000536011 SSBP3Q9BWW4 388 aaPredicted RBP11.03□□□□□ -0.64
RTN3-207ENST00000536011 SLC22A4Q9H015 551 aa11.03□□□□□ -0.64
RTN3-207ENST00000536011 IL1RAPQ9NPH3 570 aa11.03□□□□□ -0.64
RTN3-207ENST00000536011 CYB5R1Q9UHQ9 305 aa11.03□□□□□ -0.64
RTN3-207ENST00000536011 INSIG2Q9Y5U4 225 aa11.03□□□□□ -0.64
RTN3-207ENST00000536011 F5H5K5 113 aa11.02□□□□□ -0.65
RTN3-207ENST00000536011 ARPC2O15144 300 aa11.02□□□□□ -0.65
RTN3-207ENST00000536011 GPANK1O95872 356 aa11.02□□□□□ -0.65
RTN3-207ENST00000536011 ACSM4P0C7M7 580 aa11.02□□□□□ -0.65
RTN3-207ENST00000536011 PPIAL4GP0DN37 164 aa11.02□□□□□ -0.65
RTN3-207ENST00000536011 ZNF823P16415 610 aa11.02□□□□□ -0.65
RTN3-207ENST00000536011 RRM2P31350 389 aa11.02□□□□□ -0.65
RTN3-207ENST00000536011 GSSP48637 474 aa11.02□□□□□ -0.65
RTN3-207ENST00000536011 MNAT1P51948 309 aa11.02□□□□□ -0.65
RTN3-207ENST00000536011 RAD23AP54725 363 aa11.02□□□□□ -0.65
RTN3-207ENST00000536011 GNB2P62879 340 aa11.02□□□□□ -0.65
RTN3-207ENST00000536011 MXRA7P84157 204 aa11.02□□□□□ -0.65
RTN3-207ENST00000536011 TRAP1Q12931 704 aaKnown RBP11.02□□□□□ -0.65
RTN3-207ENST00000536011 TSPAN31Q12999 210 aa11.02□□□□□ -0.65
RTN3-207ENST00000536011 LRRN1Q6UXK5 716 aa11.02□□□□□ -0.65
RTN3-207ENST00000536011 PGAP1Q75T13 922 aa11.02□□□□□ -0.65
RTN3-207ENST00000536011 MOGAT3Q86VF5 341 aa11.02□□□□□ -0.65
RTN3-207ENST00000536011 OR8B3Q8NGG8 313 aa11.02□□□□□ -0.65
RTN3-207ENST00000536011 OR4C15Q8NGM1 316 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms