RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 DOK3Q7L591 496 aa11.15□□□□□ -0.62
CLSTN3-205ENST00000535452 FAM122BQ7Z309 247 aa11.15□□□□□ -0.62
CLSTN3-205ENST00000535452 MOGAT3Q86VF5 341 aa11.15□□□□□ -0.62
CLSTN3-205ENST00000535452 PARP8Q8N3A8 854 aa11.15□□□□□ -0.62
CLSTN3-205ENST00000535452 DEFB108BQ8NET1 73 aa11.15□□□□□ -0.62
CLSTN3-205ENST00000535452 SLC7A6Q92536 515 aa11.15□□□□□ -0.62
CLSTN3-205ENST00000535452 ATF6BQ99941 703 aa11.15□□□□□ -0.62
CLSTN3-205ENST00000535452 CCDC134Q9H6E4 229 aa11.15□□□□□ -0.62
CLSTN3-205ENST00000535452 FN3KRPQ9HA64 309 aa11.15□□□□□ -0.62
CLSTN3-205ENST00000535452 ERVK-18Q9QC07 812 aa11.15□□□□□ -0.62
CLSTN3-205ENST00000535452 KCNG2Q9UJ96 466 aa11.15□□□□□ -0.62
CLSTN3-205ENST00000535452 POLR3KQ9Y2Y1 108 aaPredicted RBP11.15□□□□□ -0.62
CLSTN3-205ENST00000535452 IQCF6A8MYZ5 107 aa11.14□□□□□ -0.63
CLSTN3-205ENST00000535452 IDH3BO43837 385 aa11.14□□□□□ -0.63
CLSTN3-205ENST00000535452 CYB5R3P00387 301 aaPredicted RBP11.14□□□□□ -0.63
CLSTN3-205ENST00000535452 FABP3P05413 133 aa11.14□□□□□ -0.63
CLSTN3-205ENST00000535452 PPIAL4GP0DN37 164 aa11.14□□□□□ -0.63
CLSTN3-205ENST00000535452 ZFP36P26651 326 aaKnown RBP11.14□□□□□ -0.63
CLSTN3-205ENST00000535452 RRM2P31350 389 aa11.14□□□□□ -0.63
CLSTN3-205ENST00000535452 MDH1P40925 334 aaKnown RBP11.14□□□□□ -0.63
CLSTN3-205ENST00000535452 PITPNBP48739 271 aa11.14□□□□□ -0.63
CLSTN3-205ENST00000535452 NPY4RP50391 375 aa11.14□□□□□ -0.63
CLSTN3-205ENST00000535452 BPIFB3P59826 476 aa11.14□□□□□ -0.63
CLSTN3-205ENST00000535452 OR8G1Q15617 311 aa11.14□□□□□ -0.63
CLSTN3-205ENST00000535452 KCNMB1Q16558 191 aa11.14□□□□□ -0.63
CLSTN3-205ENST00000535452 ZNF181Q2M3W8 571 aa11.14□□□□□ -0.63
CLSTN3-205ENST00000535452 RFX4Q33E94 735 aa11.14□□□□□ -0.63
CLSTN3-205ENST00000535452 CCDC92Q53HC0 331 aaPredicted RBP11.14□□□□□ -0.63
CLSTN3-205ENST00000535452 KLBQ86Z14 1044 aa11.14□□□□□ -0.63
CLSTN3-205ENST00000535452 ZDHHC22Q8N966 263 aa11.14□□□□□ -0.63
CLSTN3-205ENST00000535452 ZNF420Q8TAQ5 688 aaPredicted RBP11.14□□□□□ -0.63
CLSTN3-205ENST00000535452 RAB40AQ8WXH6 277 aa11.14□□□□□ -0.63
CLSTN3-205ENST00000535452 NSMCE2Q96MF7 247 aa11.14□□□□□ -0.63
CLSTN3-205ENST00000535452 RPRD1BQ9NQG5 326 aaKnown RBP11.14□□□□□ -0.63
CLSTN3-205ENST00000535452 MMP26Q9NRE1 261 aa11.14□□□□□ -0.63
CLSTN3-205ENST00000535452 OPN4Q9UHM6 478 aa11.14□□□□□ -0.63
CLSTN3-205ENST00000535452 PCDHGB1Q9Y5G3 927 aa11.14□□□□□ -0.63
CLSTN3-205ENST00000535452 V9GYQ6 96 aa11.14□□□□□ -0.63
CLSTN3-205ENST00000535452 GGT3PA6NGU5 568 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 DNAJC9-AS1A6NH13 148 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 POM121CA8CG34 1229 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 ENSAO43768 121 aaKnown RBP11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 SASH3O75995 380 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 TXNDC12O95881 172 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 DBHP09172 617 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 PRDX6P30041 224 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 OMPP47874 163 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 COX10Q12887 443 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 C17orf107Q6ZR85 190 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 DCDC5Q6ZRR9 648 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 CPLX4Q7Z7G2 160 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 LINC00471Q8N535 108 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 CELF2-AS1Q8N7Q2 184 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 SPERTQ8NA61 448 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 PROKR2Q8NFJ6 384 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 OR2T4Q8NH00 348 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 OR4K13Q8NH42 304 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 GNPDA2Q8TDQ7 276 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 PYURFQ96I23 114 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 TECTBQ96PL2 329 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 DUX5Q96PT3 197 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 NMNAT3Q96T66 252 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 SLC30A2Q9BRI3 323 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 NUDT16L1Q9BRJ7 211 aaKnown RBP11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 ZNF747Q9BV97 191 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 FAM107BQ9H098 131 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 OR52D1Q9H346 318 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 OPA3Q9H6K4 179 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 SP140LQ9H930 580 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 DCAF13Q9NV06 445 aaKnown RBP11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 NDUFAF4Q9P032 175 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 ZNF69Q9UC07 566 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 B9D1Q9UPM9 204 aa11.13□□□□□ -0.63
CLSTN3-205ENST00000535452 TRAV40A0A0B4J280 105 aa11.12□□□□□ -0.63
CLSTN3-205ENST00000535452 IGHV2-70DA0A0C4DH43 119 aa11.12□□□□□ -0.63
CLSTN3-205ENST00000535452 A0A1B0GUS0 222 aa11.12□□□□□ -0.63
CLSTN3-205ENST00000535452 A6NLC8 198 aa11.12□□□□□ -0.63
CLSTN3-205ENST00000535452 F5H5P2 479 aa11.12□□□□□ -0.63
CLSTN3-205ENST00000535452 PHYHO14832 338 aa11.12□□□□□ -0.63
CLSTN3-205ENST00000535452 ARPC3O15145 178 aa11.12□□□□□ -0.63
CLSTN3-205ENST00000535452 NDUFA2O43678 99 aa11.12□□□□□ -0.63
CLSTN3-205ENST00000535452 PTP4A3O75365 173 aa11.12□□□□□ -0.63
CLSTN3-205ENST00000535452 KRT36O76013 467 aa11.12□□□□□ -0.63
CLSTN3-205ENST00000535452 FSTL3O95633 263 aa11.12□□□□□ -0.63
CLSTN3-205ENST00000535452 SCG5P05408 212 aa11.12□□□□□ -0.63
CLSTN3-205ENST00000535452 LIPFP07098 398 aa11.12□□□□□ -0.63
CLSTN3-205ENST00000535452 RNASE1P07998 156 aaKnown RBP11.12□□□□□ -0.63
CLSTN3-205ENST00000535452 WNT2P09544 360 aa11.12□□□□□ -0.63
CLSTN3-205ENST00000535452 GRK5P34947 590 aa11.12□□□□□ -0.63
CLSTN3-205ENST00000535452 TRAP1Q12931 704 aaKnown RBP11.12□□□□□ -0.63
CLSTN3-205ENST00000535452 OR8B8Q15620 311 aa11.12□□□□□ -0.63
CLSTN3-205ENST00000535452 SAMD4BQ5PRF9 694 aaKnown RBP11.12□□□□□ -0.63
CLSTN3-205ENST00000535452 CGB2Q6NT52 195 aa11.12□□□□□ -0.63
CLSTN3-205ENST00000535452 Q6ZR03 302 aa11.12□□□□□ -0.63
CLSTN3-205ENST00000535452 SPATC1Q76KD6 591 aa11.12□□□□□ -0.63
CLSTN3-205ENST00000535452 PNLDC1Q8NA58 520 aaKnown RBP11.12□□□□□ -0.63
CLSTN3-205ENST00000535452 SLCO4A1Q96BD0 722 aa11.12□□□□□ -0.63
CLSTN3-205ENST00000535452 COPS4Q9BT78 406 aa11.12□□□□□ -0.63
CLSTN3-205ENST00000535452 POFUT1Q9H488 388 aa11.12□□□□□ -0.63
CLSTN3-205ENST00000535452 GORASP2Q9H8Y8 452 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms