RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 SLC16A14Q7RTX9 510 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 RNF130Q86XS8 419 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 PHF13Q86YI8 300 aaPredicted RBP2.97□□□□□ -1.93
CSMD3-210ENST00000534172 SLC22A15Q8IZD6 547 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 GABRG1Q8N1C3 465 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 LRRC18Q8N456 261 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 STXBP6Q8NFX7 210 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 OR5D18Q8NGL1 313 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 OR1L6Q8NGR2 347 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 ITFG1Q8TB96 612 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 NEK7Q8TDX7 302 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 PHF10Q8WUB8 498 aaKnown RBP2.97□□□□□ -1.93
CSMD3-210ENST00000534172 GATAD1Q8WUU5 269 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 ZNF501Q96CX3 271 aaPredicted RBP2.97□□□□□ -1.93
CSMD3-210ENST00000534172 ASB9Q96DX5 294 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 C12orf42Q96LP6 360 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 FAM218AQ96MZ4 157 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 SLC38A2Q96QD8 506 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 FMO2Q99518 471 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 DPH7Q9BTV6 452 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 GGACTQ9BVM4 153 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 NHEJ1Q9H9Q4 299 aaPredicted RBP2.97□□□□□ -1.93
CSMD3-210ENST00000534172 DYRK4Q9NR20 520 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 SIRT7Q9NRC8 400 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 ABCB10Q9NRK6 738 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 CLEC5AQ9NY25 188 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 GPR83Q9NYM4 423 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 NAGKQ9UJ70 344 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 SCP2D1Q9UJQ7 156 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 C3orf18Q9UK00 162 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 IKZF3Q9UKT9 509 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 SCML1Q9UN30 329 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 PEX16Q9Y5Y5 336 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 EPG5Q9HCE0 2579 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 TSTD3H0UI37 97 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 DNASE2O00115 360 aaPredicted RBP2.97□□□□□ -1.93
CSMD3-210ENST00000534172 IMPA2O14732 288 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 ARPC5O15511 151 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 CFLARO15519 480 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 GPAA1O43292 621 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 RAD51CO43502 376 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 TPST2O60704 377 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 EDF1O60869 148 aaKnown RBP2.97□□□□□ -1.93
CSMD3-210ENST00000534172 UGT2B11O75310 529 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 IGLV1-44P01699 117 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 SLC35G4P0C7Q5 338 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 TRIM49P0CI25 452 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 TRIM49CP0CI26 452 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 ATP1B2P14415 290 aaPredicted RBP2.97□□□□□ -1.93
CSMD3-210ENST00000534172 ZNF26P17031 533 aaPredicted RBP2.97□□□□□ -1.93
CSMD3-210ENST00000534172 ATP6V1B2P21281 511 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 SHMT2P34897 504 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 ACOT2P49753 483 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 RAG2P55895 527 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 RAB2AP61019 212 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 MRPS11P82912 194 aaKnown RBP2.97□□□□□ -1.93
CSMD3-210ENST00000534172 MRPS6P82932 125 aaKnown RBP2.97□□□□□ -1.93
CSMD3-210ENST00000534172 EWSR1Q01844 656 aaKnown RBP eCLIP2.97□□□□□ -1.93
CSMD3-210ENST00000534172 ZFP36L1Q07352 338 aaKnown RBP2.97□□□□□ -1.93
CSMD3-210ENST00000534172 PDIA2Q13087 525 aaKnown RBP2.97□□□□□ -1.93
CSMD3-210ENST00000534172 RIGQ13278 110 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 SPA17Q15506 151 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 MPPED2Q15777 294 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 CHI3L2Q15782 390 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 DGUOKQ16854 277 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 EXOC3L4Q17RC7 722 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 RFTN2Q52LD8 501 aaPredicted RBP2.97□□□□□ -1.93
CSMD3-210ENST00000534172 DMKNQ6E0U4 476 aaPredicted RBP2.97□□□□□ -1.93
CSMD3-210ENST00000534172 SLC8B1Q6J4K2 584 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 FAM71F2Q6NXP2 309 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 LRRN1Q6UXK5 716 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 CYP4Z1Q86W10 505 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 RAB43Q86YS6 212 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 SKA3Q8IX90 412 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 C8orf59Q8N0T1 100 aaPredicted RBP2.97□□□□□ -1.93
CSMD3-210ENST00000534172 C9orf62Q8N4C0 152 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 ARRDC1Q8N5I2 433 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 CCDC54Q8NEL0 328 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 LRRC15Q8TF66 581 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 ZNRF4Q8WWF5 429 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 BTN2A3PQ96KV6 586 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 PRRT1Q99946 306 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 TMEM121Q9BTD3 319 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 HINT2Q9BX68 163 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 DGCR6LQ9BY27 220 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 ZNF302Q9NR11 478 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 LYARQ9NX58 379 aaKnown RBP2.97□□□□□ -1.93
CSMD3-210ENST00000534172 MED11Q9P086 117 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 PCYOX1Q9UHG3 505 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 FBXO5Q9UKT4 447 aa2.97□□□□□ -1.93
CSMD3-210ENST00000534172 NDRG2Q9UN36 371 aaKnown RBP2.97□□□□□ -1.93
CSMD3-210ENST00000534172 A0A087WW49 117 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 OR5H15A6NDH6 313 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 MSGN1A6NI15 193 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 TRDCB7Z8K6 153 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 KDELR3O43731 214 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 SUPT7LO94864 414 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 GAPDHP04406 335 aaKnown RBP2.96□□□□□ -1.94
CSMD3-210ENST00000534172 C2P06681 752 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 ME2P23368 584 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms