RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 MMP9P14780 707 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 MATN1P21941 496 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 CCNOP22674 350 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 TYK2P29597 1187 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 HMOX2P30519 316 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 PHBP35232 272 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 CFHR2P36980 270 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 PMELP40967 661 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 WNT5AP41221 380 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 ACAA2P42765 397 aaKnown RBP2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 MAGEA4P43358 317 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 KRT6CP48668 564 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 CLK1P49759 484 aaKnown RBP2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 POLR2HP52434 150 aaKnown RBP2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 EFNB2P52799 333 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 SELENOVP59797 346 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 BTG1P62324 171 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 ARF6P62330 175 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 VAMP2P63027 116 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 KCNJ10P78508 379 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 TNFAIP6P98066 277 aaPredicted RBP2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 RBBP4Q09028 425 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 COX10Q12887 443 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 CAMK2DQ13557 499 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 C1DQ13901 141 aaKnown RBP2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 PDE7AQ13946 482 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 MFSD13AQ14CX5 517 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 KIAA0040Q15053 153 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 RCN1Q15293 331 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 SMU1Q2TAY7 513 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 MS4A18Q3C1V0 323 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 SPIN4Q56A73 249 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 C1QTNF12Q5T7M4 302 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 FAM205BPQ63HN1 556 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 ATG16L1Q676U5 607 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 TYW3Q6IPR3 259 aaKnown RBP2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 NHLRC1Q6VVB1 395 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 WDR88Q6ZMY6 472 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 ZNF841Q6ZN19 808 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 Q6ZR03 302 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 GPRIN3Q6ZVF9 776 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 PTCHD4Q6ZW05 846 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 TRMT10CQ7L0Y3 403 aaKnown RBP2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 EIF3MQ7L2H7 374 aaKnown RBP2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 ABHD12BQ7Z5M8 362 aaPredicted RBP2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 BCDIN3DQ7Z5W3 292 aaKnown RBP2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 C20orf196Q8IYI0 205 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 ZNF101Q8IZC7 436 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 TMEM123Q8N131 208 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 GPR137CQ8N3F9 429 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 CADM2Q8N3J6 435 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 FGFRL1Q8N441 504 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 KRTCAP2Q8N6L1 136 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 SLC30A7Q8NEW0 376 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 OR4S1Q8NGB4 309 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 OR1J1Q8NGS3 322 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 OR2T11Q8NH01 316 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 ZNF420Q8TAQ5 688 aaPredicted RBP2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 ZNF519Q8TB69 540 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 SLC25A40Q8TBP6 338 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 ITLN1Q8WWA0 313 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 PPCDCQ96CD2 204 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 DDIT4LQ96D03 193 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 ELMOD3Q96FG2 381 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 MPP4Q96JB8 637 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 MAGEB18Q96M61 343 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 ZNF570Q96NI8 536 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 PRR25Q96S07 402 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 STACQ99469 402 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 TSC22D3Q99576 134 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 TMEM246Q9BRR3 403 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 CHID1Q9BWS9 393 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 LINC00470Q9BZP3 86 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 OR2J1Q9GZK6 312 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 CCDC134Q9H6E4 229 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 REEP4Q9H6H4 257 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 NANOGQ9H9S0 305 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 HHATLQ9HCP6 504 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 INPP5EQ9NRR6 644 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 ACOXLQ9NUZ1 547 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 NSMCE4AQ9NXX6 385 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 SLCO1C1Q9NYB5 712 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 MDFICQ9P1T7 246 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 TXNDC16Q9P2K2 825 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 POFUT2Q9Y2G5 429 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 SPIN1Q9Y657 262 aaPredicted RBP2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 POMT1Q9Y6A1 747 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 USH1CQ9Y6N9 552 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 DOCK11Q5JSL3 2073 aa2.41□□□□□ -2.02
CHMP4A-208ENST00000534106 VPS13DQ5THJ4 4388 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 LOC100509620A0A075B734 347 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 A0A1B0GW55 424 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 FAM90A18PA6NE21 464 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 FAM90A16PA6NEW6 464 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 FAM90A9PA6NNJ1 464 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 FAM90A5PA8MXJ8 464 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 ZNF879B4DU55 563 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 FTCDNL1E5RQL4 147 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 TMEM178BH3BS89 294 aa2.4□□□□□ -2.03
CHMP4A-208ENST00000534106 ANKRD28O15084 1053 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms