RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 HPS1Q92902 700 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 PTP4A1Q93096 173 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 TMEM186Q96B77 213 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 ELMOD3Q96FG2 381 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 FAHD2AQ96GK7 314 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 OR2V2Q96R30 315 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 FEVQ99581 238 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 CHID1Q9BWS9 393 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 NMNAT2Q9BZQ4 307 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 NTN4Q9HB63 628 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 IL20Q9NYY1 176 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 ZNF319Q9P2F9 582 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 TMCC3Q9ULS5 477 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 POLR1DQ9Y2S0 133 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 KLHDC2Q9Y2U9 406 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 SAMHD1Q9Y3Z3 626 aaKnown RBP8.11□□□□□ -1.11
SSBP3-215ENST00000533946 N6AMT1Q9Y5N5 214 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 CMYA5Q8N3K9 4069 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 ISPDA4D126 451 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 B4DSR2 109 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 M0R129 80 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 DYNC1I1O14576 645 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 CCNB2O95067 398 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 RENP00797 406 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 HLA-DQA2P01906 255 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 CD55P08174 381 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 ADH4P08319 380 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 CALB2P22676 271 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 GUCA1AP43080 201 aaPredicted RBP8.1□□□□□ -1.11
SSBP3-215ENST00000533946 PRKXP51817 358 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 SELENOVP59797 346 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 POU4F2Q12837 409 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 TRAP1Q12931 704 aaKnown RBP8.1□□□□□ -1.11
SSBP3-215ENST00000533946 MAB21L1Q13394 359 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 MPPED2Q15777 294 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 MICAQ29983 383 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 PCGF3Q3KNV8 242 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 SLC36A3Q495N2 470 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 PRAMEF6Q5VXH4 476 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 LYPD2Q6UXB3 125 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 RASSF6Q6ZTQ3 369 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 FGFRL1Q8N441 504 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 LINC00471Q8N535 108 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 PITX2Q99697 317 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 C19orf24Q9BVV8 132 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 TRIM15Q9C019 465 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 METTL17Q9H7H0 456 aaPredicted RBP8.1□□□□□ -1.11
SSBP3-215ENST00000533946 ELOVL3Q9HB03 270 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 GCM1Q9NP62 436 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 TMEM106BQ9NUM4 274 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 TBC1D23Q9NUY8 699 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 FBXO9Q9UK97 447 aaPredicted RBP8.1□□□□□ -1.11
SSBP3-215ENST00000533946 NDRG4Q9ULP0 352 aaKnown RBP8.1□□□□□ -1.11
SSBP3-215ENST00000533946 COMMD3-BMI1R4GMX3 469 aa8.1□□□□□ -1.11
SSBP3-215ENST00000533946 PLSCR5A0PG75 271 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 PRR32B1ATL7 298 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 CLDN25C9JDP6 229 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 ZNF593O00488 134 aaPredicted RBP8.09□□□□□ -1.11
SSBP3-215ENST00000533946 ENTPD5O75356 428 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 TFF1P04155 84 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 LCATP04180 440 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 NR2C1P13056 603 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 SPI1P17947 270 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 EPHA2P29317 976 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 CRABP1P29762 137 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 MMP16P51512 607 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 ARHGDIAP52565 204 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 SMIM11AP58511 58 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 ZNF92Q03936 586 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 HFEQ30201 348 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 DMRTC1Q5HYR2 192 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 FAM209AQ5JX71 171 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 GLYATL3Q5SZD4 288 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 FBXW12Q6X9E4 464 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 DCXRQ7Z4W1 244 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 BCDIN3DQ7Z5W3 292 aaKnown RBP8.09□□□□□ -1.11
SSBP3-215ENST00000533946 MOGAT3Q86VF5 341 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 BCL6BQ8N143 479 aaPredicted RBP8.09□□□□□ -1.11
SSBP3-215ENST00000533946 LNX2Q8N448 690 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 ZNF283Q8N7M2 679 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.09□□□□□ -1.11
SSBP3-215ENST00000533946 ATG16L2Q8NAA4 619 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 PROKR2Q8NFJ6 384 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 GJC3Q8NFK1 279 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 OR10G2Q8NGC3 310 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 ST7LQ8TDW4 575 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 MEGF10Q96KG7 1140 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 COQ7Q99807 217 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 CADM1Q9BY67 442 aaKnown RBP8.09□□□□□ -1.11
SSBP3-215ENST00000533946 FGF23Q9GZV9 251 aaPredicted RBP8.09□□□□□ -1.11
SSBP3-215ENST00000533946 ESM1Q9NQ30 184 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 KCNG2Q9UJ96 466 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 NPTNQ9Y639 398 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 DOCK11Q5JSL3 2073 aa8.09□□□□□ -1.11
SSBP3-215ENST00000533946 TRRAPQ9Y4A5 3859 aa8.08□□□□□ -1.12
SSBP3-215ENST00000533946 IGHV3OR16-10A0A075B7F0 116 aa8.08□□□□□ -1.12
SSBP3-215ENST00000533946 A0A1B0GW55 424 aa8.08□□□□□ -1.12
SSBP3-215ENST00000533946 TMEM178BH3BS89 294 aa8.08□□□□□ -1.12
SSBP3-215ENST00000533946 SELENOFO60613 162 aa8.08□□□□□ -1.12
SSBP3-215ENST00000533946 MITFO75030 526 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms