RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 ACTG1P63261 375 aa13.6□□□□□ -0.23
CACNA1E-208ENST00000533229 SSBP1Q04837 148 aaKnown RBP13.6□□□□□ -0.23
CACNA1E-208ENST00000533229 UNC119Q13432 240 aa13.6□□□□□ -0.23
CACNA1E-208ENST00000533229 SLC25A47Q6Q0C1 308 aa13.6□□□□□ -0.23
CACNA1E-208ENST00000533229 KLHL24Q6TFL4 600 aa13.6□□□□□ -0.23
CACNA1E-208ENST00000533229 NKAIN3Q8N8D7 197 aa13.6□□□□□ -0.23
CACNA1E-208ENST00000533229 OR4K17Q8NGC6 315 aa13.6□□□□□ -0.23
CACNA1E-208ENST00000533229 OR51E1Q8TCB6 317 aa13.6□□□□□ -0.23
CACNA1E-208ENST00000533229 CMBLQ96DG6 245 aa13.6□□□□□ -0.23
CACNA1E-208ENST00000533229 ASH2LQ9UBL3 628 aa13.6□□□□□ -0.23
CACNA1E-208ENST00000533229 KLK13Q9UKR3 277 aa13.6□□□□□ -0.23
CACNA1E-208ENST00000533229 IGHV1-45A0A0A0MS14 117 aa13.6□□□□□ -0.23
CACNA1E-208ENST00000533229 RAB27BO00194 218 aa13.6□□□□□ -0.23
CACNA1E-208ENST00000533229 SULT1C2O00338 296 aa13.6□□□□□ -0.23
CACNA1E-208ENST00000533229 TDGF1P13385 188 aa13.6□□□□□ -0.23
CACNA1E-208ENST00000533229 HOXA6P31267 233 aa13.6□□□□□ -0.23
CACNA1E-208ENST00000533229 PRKXP51817 358 aa13.6□□□□□ -0.23
CACNA1E-208ENST00000533229 TAS2R19P59542 299 aa13.6□□□□□ -0.23
CACNA1E-208ENST00000533229 IL11RAQ14626 422 aa13.6□□□□□ -0.23
CACNA1E-208ENST00000533229 HIST3H3Q16695 136 aa13.6□□□□□ -0.23
CACNA1E-208ENST00000533229 FAM198BQ6UWH4 519 aa13.6□□□□□ -0.23
CACNA1E-208ENST00000533229 UXS1Q8NBZ7 420 aa13.6□□□□□ -0.23
CACNA1E-208ENST00000533229 OR4S1Q8NGB4 309 aa13.6□□□□□ -0.23
CACNA1E-208ENST00000533229 OR6X1Q8NH79 312 aa13.6□□□□□ -0.23
CACNA1E-208ENST00000533229 FAM46BQ96A09 425 aa13.6□□□□□ -0.23
CACNA1E-208ENST00000533229 OXGR1Q96P68 337 aa13.6□□□□□ -0.23
CACNA1E-208ENST00000533229 WDR54Q9H977 334 aa13.6□□□□□ -0.23
CACNA1E-208ENST00000533229 SLC5A6Q9Y289 635 aa13.6□□□□□ -0.23
CACNA1E-208ENST00000533229 D6RAR5 112 aa13.59□□□□□ -0.23
CACNA1E-208ENST00000533229 RAB3DO95716 219 aa13.59□□□□□ -0.23
CACNA1E-208ENST00000533229 ITGB2P05107 769 aa13.59□□□□□ -0.23
CACNA1E-208ENST00000533229 QDPRP09417 244 aa13.59□□□□□ -0.23
CACNA1E-208ENST00000533229 ZNF735P0CB33 412 aa13.59□□□□□ -0.23
CACNA1E-208ENST00000533229 ZNF43P17038 809 aa13.59□□□□□ -0.23
CACNA1E-208ENST00000533229 RAP2BP61225 183 aa13.59□□□□□ -0.23
CACNA1E-208ENST00000533229 QRFPP83859 136 aa13.59□□□□□ -0.23
CACNA1E-208ENST00000533229 DHODHQ02127 395 aa13.59□□□□□ -0.23
CACNA1E-208ENST00000533229 POU4F3Q15319 338 aa13.59□□□□□ -0.23
CACNA1E-208ENST00000533229 SMUG1Q53HV7 270 aa13.59□□□□□ -0.23
CACNA1E-208ENST00000533229 ESCO2Q56NI9 601 aa13.59□□□□□ -0.23
CACNA1E-208ENST00000533229 TOR2AQ5JU69 321 aa13.59□□□□□ -0.23
CACNA1E-208ENST00000533229 DCAF12L2Q5VW00 463 aa13.59□□□□□ -0.23
CACNA1E-208ENST00000533229 B3GNTL1Q67FW5 361 aaPredicted RBP13.59□□□□□ -0.23
CACNA1E-208ENST00000533229 RTN4RL2Q86UN3 420 aa13.59□□□□□ -0.23
CACNA1E-208ENST00000533229 TMEM229BQ8NBD8 167 aa13.59□□□□□ -0.23
CACNA1E-208ENST00000533229 OR1M1Q8NGA1 313 aa13.59□□□□□ -0.23
CACNA1E-208ENST00000533229 OR13C9Q8NGT0 318 aa13.59□□□□□ -0.23
CACNA1E-208ENST00000533229 SUN5Q8TC36 379 aa13.59□□□□□ -0.23
CACNA1E-208ENST00000533229 PTX4Q96A99 478 aa13.59□□□□□ -0.23
CACNA1E-208ENST00000533229 IMMP1LQ96LU5 166 aa13.59□□□□□ -0.23
CACNA1E-208ENST00000533229 GNRHR2Q96P88 292 aa13.59□□□□□ -0.23
CACNA1E-208ENST00000533229 EXO5Q9H790 373 aa13.59□□□□□ -0.23
CACNA1E-208ENST00000533229 PNRC2Q9NPJ4 139 aaKnown RBP13.59□□□□□ -0.23
CACNA1E-208ENST00000533229 OPN4Q9UHM6 478 aa13.59□□□□□ -0.23
CACNA1E-208ENST00000533229 RPS10-NUDT3A0A1W2PQS6 291 aa13.58□□□□□ -0.23
CACNA1E-208ENST00000533229 ZSCAN5BA6NJL1 495 aa13.58□□□□□ -0.23
CACNA1E-208ENST00000533229 AQP7P3A6NL99 342 aa13.58□□□□□ -0.23
CACNA1E-208ENST00000533229 VSIG8P0DPA2 414 aa13.58□□□□□ -0.23
CACNA1E-208ENST00000533229 COX6A1P12074 109 aa13.58□□□□□ -0.23
CACNA1E-208ENST00000533229 ABOP16442 354 aa13.58□□□□□ -0.23
CACNA1E-208ENST00000533229 HSD11B1P28845 292 aa13.58□□□□□ -0.23
CACNA1E-208ENST00000533229 HOXD11P31277 338 aaPredicted RBP13.58□□□□□ -0.23
CACNA1E-208ENST00000533229 IKZF1Q13422 519 aa13.58□□□□□ -0.23
CACNA1E-208ENST00000533229 ZNF529Q6P280 563 aa13.58□□□□□ -0.23
CACNA1E-208ENST00000533229 IDO2Q6ZQW0 420 aa13.58□□□□□ -0.23
CACNA1E-208ENST00000533229 CCDC28AQ8IWP9 274 aa13.58□□□□□ -0.23
CACNA1E-208ENST00000533229 UBALD2Q8IYN6 164 aa13.58□□□□□ -0.23
CACNA1E-208ENST00000533229 OR2AK2Q8NG84 335 aa13.58□□□□□ -0.23
CACNA1E-208ENST00000533229 AQP3Q92482 292 aa13.58□□□□□ -0.23
CACNA1E-208ENST00000533229 MR1Q95460 341 aa13.58□□□□□ -0.23
CACNA1E-208ENST00000533229 FOXRED1Q96CU9 486 aaPredicted RBP13.58□□□□□ -0.23
CACNA1E-208ENST00000533229 ELMOD3Q96FG2 381 aa13.58□□□□□ -0.23
CACNA1E-208ENST00000533229 SPACA5Q96QH8 159 aa13.58□□□□□ -0.23
CACNA1E-208ENST00000533229 CLEC4MQ9H2X3 399 aaPredicted RBP13.58□□□□□ -0.23
CACNA1E-208ENST00000533229 POFUT1Q9H488 388 aa13.58□□□□□ -0.23
CACNA1E-208ENST00000533229 SCPEP1Q9HB40 452 aa13.58□□□□□ -0.23
CACNA1E-208ENST00000533229 PROK2Q9HC23 129 aa13.58□□□□□ -0.23
CACNA1E-208ENST00000533229 TMEM138Q9NPI0 162 aa13.58□□□□□ -0.23
CACNA1E-208ENST00000533229 POLR1DQ9Y2S0 133 aa13.58□□□□□ -0.23
CACNA1E-208ENST00000533229 PTRH2Q9Y3E5 179 aaKnown RBP13.58□□□□□ -0.23
CACNA1E-208ENST00000533229 ADAMTS9Q9P2N4 1935 aa13.58□□□□□ -0.23
CACNA1E-208ENST00000533229 UBE2QL1A1L167 161 aa13.58□□□□□ -0.24
CACNA1E-208ENST00000533229 ZNF878C9JN71 531 aa13.58□□□□□ -0.24
CACNA1E-208ENST00000533229 G3V3Y1 287 aa13.58□□□□□ -0.24
CACNA1E-208ENST00000533229 SULT2B1O00204 365 aa13.58□□□□□ -0.24
CACNA1E-208ENST00000533229 CCL3P10147 92 aa13.58□□□□□ -0.24
CACNA1E-208ENST00000533229 ZNF17P17021 662 aa13.58□□□□□ -0.24
CACNA1E-208ENST00000533229 ADH6P28332 368 aa13.58□□□□□ -0.24
CACNA1E-208ENST00000533229 GABREP78334 506 aa13.58□□□□□ -0.24
CACNA1E-208ENST00000533229 ZNF260Q3ZCT1 412 aa13.58□□□□□ -0.24
CACNA1E-208ENST00000533229 SLC22A6Q4U2R8 563 aa13.58□□□□□ -0.24
CACNA1E-208ENST00000533229 TMPPEQ6ZT21 453 aa13.58□□□□□ -0.24
CACNA1E-208ENST00000533229 WDR5BQ86VZ2 330 aa13.58□□□□□ -0.24
CACNA1E-208ENST00000533229 OR2AJ1Q8NGZ0 328 aa13.58□□□□□ -0.24
CACNA1E-208ENST00000533229 COLQQ9Y215 455 aaPredicted RBP13.58□□□□□ -0.24
CACNA1E-208ENST00000533229 HDGFL3Q9Y3E1 203 aa13.58□□□□□ -0.24
CACNA1E-208ENST00000533229 HS3ST3B1Q9Y662 390 aa13.58□□□□□ -0.24
CACNA1E-208ENST00000533229 A0A0A6YYH2 397 aa13.57□□□□□ -0.24
CACNA1E-208ENST00000533229 LINC00862A6NCI5 91 aa13.57□□□□□ -0.24
CACNA1E-208ENST00000533229 A6NJ64 397 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms