RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 MOB3AQ96BX8 217 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 ACY3Q96HD9 319 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 DIRAS2Q96HU8 199 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 GUCD1Q96NT3 240 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 AMDHD1Q96NU7 426 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 IL17FQ96PD4 163 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 ATOH8Q96SQ7 321 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 IMMP2LQ96T52 175 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 CITED1Q99966 193 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 NAA11Q9BSU3 229 aaPredicted RBP4.91□□□□□ -1.62
CD44-236ENST00000533222 ELOVL1Q9BW60 279 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 COLEC11Q9BWP8 271 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 C1QTNF6Q9BXI9 259 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 KRTAP4-7Q9BYR0 210 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 RAB34Q9BZG1 259 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 OR2J1Q9GZK6 312 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 C20orf27Q9GZN8 174 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 ZBP1Q9H171 429 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 GEMIN7Q9H840 131 aaKnown RBP4.91□□□□□ -1.62
CD44-236ENST00000533222 MTHFD2LQ9H903 347 aaPredicted RBP4.91□□□□□ -1.62
CD44-236ENST00000533222 GPN1Q9HCN4 374 aaPredicted RBP4.91□□□□□ -1.62
CD44-236ENST00000533222 OR2S2Q9NQN1 319 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 DNAJB11Q9UBS4 358 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 PSORS1C1Q9UIG5 152 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 ZNF391Q9UJN7 358 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 ZNF223Q9UK11 482 aaPredicted RBP4.91□□□□□ -1.62
CD44-236ENST00000533222 MCTS1Q9ULC4 181 aaKnown RBP4.91□□□□□ -1.62
CD44-236ENST00000533222 COX11Q9Y6N1 276 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 DOCK5Q9H7D0 1870 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 WDR81Q562E7 1941 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 NUP188Q5SRE5 1749 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 ZNF646O15015 1829 aaPredicted RBP4.9□□□□□ -1.62
CD44-236ENST00000533222 C5P01031 1676 aa4.9□□□□□ -1.62
CD44-236ENST00000533222 PXDNQ92626 1479 aa4.9□□□□□ -1.62
CD44-236ENST00000533222 TIAM2Q8IVF5 1701 aa4.9□□□□□ -1.62
CD44-236ENST00000533222 ARAP2Q8WZ64 1704 aa4.9□□□□□ -1.62
CD44-236ENST00000533222 NWD2Q9ULI1 1742 aa4.9□□□□□ -1.62
CD44-236ENST00000533222 LOC102723971A0A1B0GUV8 181 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 A0A1B0GW15 77 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 ANKRD20A5PA0PJZ0 165 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 IGSF23A1L1A6 192 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 WDR27A2RRH5 827 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 OR6C76A6NM76 312 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 G3V4G9 280 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 SLC16A5O15375 505 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 SSNA1O43805 119 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 MFSD11O43934 449 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 C1QL1O75973 258 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 SCELO95171 688 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 RCBTB2O95199 551 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 TMEM50AO95807 157 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 PMP2P02689 132 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 C1QAP02745 245 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 AMBPP02760 352 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 TYMSP04818 313 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 OR4Q2P0C623 313 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 UROSP10746 265 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 KITLGP21583 273 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 GDF1P27539 372 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 CHRNB4P30926 498 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 OR10J1P30954 320 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 SRD5A2P31213 254 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 FGF9P31371 208 aaPredicted RBP4.9□□□□□ -1.63
CD44-236ENST00000533222 TGFBR1P36897 503 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 OPRD1P41143 372 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 MTNR1AP48039 350 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 CAV2P51636 162 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 PIGPP57054 158 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 ERVPABLB-1P60509 514 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 RPS13P62277 151 aaKnown RBP4.9□□□□□ -1.63
CD44-236ENST00000533222 LSM3P62310 102 aaKnown RBP4.9□□□□□ -1.63
CD44-236ENST00000533222 PPIAP62937 165 aaKnown RBP4.9□□□□□ -1.63
CD44-236ENST00000533222 OC90Q02509 493 aaPredicted RBP4.9□□□□□ -1.63
CD44-236ENST00000533222 BAXQ07812 192 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 AESQ08117 197 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 CRYZQ08257 329 aaKnown RBP4.9□□□□□ -1.63
CD44-236ENST00000533222 TMEM132DQ14C87 1099 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 MAD2L1BPQ15013 274 aaPredicted RBP4.9□□□□□ -1.63
CD44-236ENST00000533222 TEAD2Q15562 447 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 CRY2Q49AN0 593 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 CTSL3PQ5NE16 218 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 HENMT1Q5T8I9 393 aaKnown RBP4.9□□□□□ -1.63
CD44-236ENST00000533222 RAET1LQ5VY80 246 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 GGNBP1Q5YKI7 109 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 LAIR1Q6GTX8 287 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 OR4A47Q6IF82 309 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 CCDC144NLQ6NUI1 221 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 ADAM5Q6NVV9 412 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 PCSK4Q6UW60 755 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 B3GLCTQ6Y288 498 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 PNKDQ8N490 385 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 KCNRGQ8N5I3 272 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 RNF148Q8N7C7 305 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 OR4K2Q8NGD2 314 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 OR52B6Q8NGF0 335 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 ARRDC2Q8TBH0 407 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 MRAPQ8TCY5 172 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 SLC2A12Q8TD20 617 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 ZNF675Q8TD23 568 aa4.9□□□□□ -1.63
CD44-236ENST00000533222 DOK4Q8TEW6 326 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms