RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 COPS4Q9BT78 406 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 C1QTNF5Q9BXJ0 243 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 YIPF3Q9GZM5 350 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 CENPMQ9NSP4 180 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 FAM118AQ9NWS6 357 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 IMPAD1Q9NX62 359 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 SMPD3Q9NY59 655 aaPredicted RBP10.27□□□□□ -0.77
SSBP3-214ENST00000533209 HAO2Q9NYQ3 351 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 DNAJC27Q9NZQ0 273 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 FBXO9Q9UK97 447 aaPredicted RBP10.27□□□□□ -0.77
SSBP3-214ENST00000533209 GMPPBQ9Y5P6 360 aa10.27□□□□□ -0.77
SSBP3-214ENST00000533209 ARFGEF3Q5TH69 2177 aa10.26□□□□□ -0.77
SSBP3-214ENST00000533209 LOC100130705A0A1B0GUX0 176 aa10.26□□□□□ -0.77
SSBP3-214ENST00000533209 A0A1W2PPW3 197 aa10.26□□□□□ -0.77
SSBP3-214ENST00000533209 M0R233 179 aa10.26□□□□□ -0.77
SSBP3-214ENST00000533209 SLC16A6O15403 523 aa10.26□□□□□ -0.77
SSBP3-214ENST00000533209 ADRA2AP08913 450 aa10.26□□□□□ -0.77
SSBP3-214ENST00000533209 ALOX5APP20292 161 aa10.26□□□□□ -0.77
SSBP3-214ENST00000533209 TUBG1P23258 451 aa10.26□□□□□ -0.77
SSBP3-214ENST00000533209 ANOS1P23352 680 aa10.26□□□□□ -0.77
SSBP3-214ENST00000533209 GCH1P30793 250 aa10.26□□□□□ -0.77
SSBP3-214ENST00000533209 HTR1FP30939 366 aa10.26□□□□□ -0.77
SSBP3-214ENST00000533209 OPRL1P41146 370 aa10.26□□□□□ -0.77
SSBP3-214ENST00000533209 NUDT6P53370 316 aa10.26□□□□□ -0.77
SSBP3-214ENST00000533209 TPTEP56180 551 aa10.26□□□□□ -0.77
SSBP3-214ENST00000533209 SELENOVP59797 346 aa10.26□□□□□ -0.77
SSBP3-214ENST00000533209 SLC25A30Q5SVS4 291 aa10.26□□□□□ -0.77
SSBP3-214ENST00000533209 SHEQ5VZ18 495 aa10.26□□□□□ -0.77
SSBP3-214ENST00000533209 RHOUQ7L0Q8 258 aa10.26□□□□□ -0.77
SSBP3-214ENST00000533209 THEM6Q8WUY1 208 aa10.26□□□□□ -0.77
SSBP3-214ENST00000533209 SPTSSAQ969W0 71 aa10.26□□□□□ -0.77
SSBP3-214ENST00000533209 APOBEC3DQ96AK3 386 aaPredicted RBP10.26□□□□□ -0.77
SSBP3-214ENST00000533209 COG8Q96MW5 612 aa10.26□□□□□ -0.77
SSBP3-214ENST00000533209 CNN2Q99439 309 aaKnown RBP10.26□□□□□ -0.77
SSBP3-214ENST00000533209 KCNJ15Q99712 375 aa10.26□□□□□ -0.77
SSBP3-214ENST00000533209 VRK1Q99986 396 aaPredicted RBP10.26□□□□□ -0.77
SSBP3-214ENST00000533209 BARX1Q9HBU1 254 aaPredicted RBP10.26□□□□□ -0.77
SSBP3-214ENST00000533209 ADGRL4Q9HBW9 690 aa10.26□□□□□ -0.77
SSBP3-214ENST00000533209 DYNLRB1Q9NP97 96 aa10.26□□□□□ -0.77
SSBP3-214ENST00000533209 C8orf4Q9NR00 106 aa10.26□□□□□ -0.77
SSBP3-214ENST00000533209 TUBG2Q9NRH3 451 aa10.26□□□□□ -0.77
SSBP3-214ENST00000533209 SLCO1C1Q9NYB5 712 aa10.26□□□□□ -0.77
SSBP3-214ENST00000533209 TAAR3PQ9P1P4 343 aa10.26□□□□□ -0.77
SSBP3-214ENST00000533209 WARS2Q9UGM6 360 aaKnown RBP10.26□□□□□ -0.77
SSBP3-214ENST00000533209 HIVEP1P15822 2718 aa10.26□□□□□ -0.77
SSBP3-214ENST00000533209 C5orf63A6NC05 138 aa10.25□□□□□ -0.77
SSBP3-214ENST00000533209 ENTPD6O75354 484 aa10.25□□□□□ -0.77
SSBP3-214ENST00000533209 LYNP07948 512 aa10.25□□□□□ -0.77
SSBP3-214ENST00000533209 GABRB1P18505 474 aa10.25□□□□□ -0.77
SSBP3-214ENST00000533209 SLC15A1P46059 708 aa10.25□□□□□ -0.77
SSBP3-214ENST00000533209 PRKXP51817 358 aa10.25□□□□□ -0.77
SSBP3-214ENST00000533209 EFNA4P52798 201 aa10.25□□□□□ -0.77
SSBP3-214ENST00000533209 GRB2P62993 217 aaKnown RBP10.25□□□□□ -0.77
SSBP3-214ENST00000533209 SLC34A1Q06495 639 aa10.25□□□□□ -0.77
SSBP3-214ENST00000533209 PSG7Q13046 419 aa10.25□□□□□ -0.77
SSBP3-214ENST00000533209 TMED1Q13445 227 aa10.25□□□□□ -0.77
SSBP3-214ENST00000533209 HLXQ14774 488 aaPredicted RBP10.25□□□□□ -0.77
SSBP3-214ENST00000533209 TAF13Q15543 124 aa10.25□□□□□ -0.77
SSBP3-214ENST00000533209 OCLNQ16625 522 aa10.25□□□□□ -0.77
SSBP3-214ENST00000533209 NKPD1Q17RQ9 610 aa10.25□□□□□ -0.77
SSBP3-214ENST00000533209 ALKBH6Q3KRA9 238 aa10.25□□□□□ -0.77
SSBP3-214ENST00000533209 DRAM2Q6UX65 266 aa10.25□□□□□ -0.77
SSBP3-214ENST00000533209 FBXW12Q6X9E4 464 aa10.25□□□□□ -0.77
SSBP3-214ENST00000533209 ENTHD1Q8IYW4 607 aa10.25□□□□□ -0.77
SSBP3-214ENST00000533209 OR5L1Q8NGL2 311 aa10.25□□□□□ -0.77
SSBP3-214ENST00000533209 RHOXF1Q8NHV9 184 aa10.25□□□□□ -0.77
SSBP3-214ENST00000533209 GTF3AQ92664 365 aaKnown RBP10.25□□□□□ -0.77
SSBP3-214ENST00000533209 HAVCR1Q96D42 359 aa10.25□□□□□ -0.77
SSBP3-214ENST00000533209 CMBLQ96DG6 245 aa10.25□□□□□ -0.77
SSBP3-214ENST00000533209 MS4A5Q9H3V2 200 aa10.25□□□□□ -0.77
SSBP3-214ENST00000533209 RNPEPL1Q9HAU8 725 aa10.25□□□□□ -0.77
SSBP3-214ENST00000533209 PTTG3PQ9NZH4 202 aa10.25□□□□□ -0.77
SSBP3-214ENST00000533209 AASSQ9UDR5 926 aa10.25□□□□□ -0.77
SSBP3-214ENST00000533209 COPS3Q9UNS2 423 aa10.25□□□□□ -0.77
SSBP3-214ENST00000533209 PRR32B1ATL7 298 aa10.24□□□□□ -0.77
SSBP3-214ENST00000533209 SSX4O60224 188 aa10.24□□□□□ -0.77
SSBP3-214ENST00000533209 LY6HO94772 140 aa10.24□□□□□ -0.77
SSBP3-214ENST00000533209 F12P00748 615 aaPredicted RBP10.24□□□□□ -0.77
SSBP3-214ENST00000533209 LCATP04180 440 aa10.24□□□□□ -0.77
SSBP3-214ENST00000533209 H2BFMP0C1H6 154 aa10.24□□□□□ -0.77
SSBP3-214ENST00000533209 SBK2P0C263 348 aa10.24□□□□□ -0.77
SSBP3-214ENST00000533209 SLC2A1P11166 492 aa10.24□□□□□ -0.77
SSBP3-214ENST00000533209 NAT2P11245 290 aa10.24□□□□□ -0.77
SSBP3-214ENST00000533209 RAC2P15153 192 aa10.24□□□□□ -0.77
SSBP3-214ENST00000533209 KITLGP21583 273 aa10.24□□□□□ -0.77
SSBP3-214ENST00000533209 SLC6A9P48067 706 aa10.24□□□□□ -0.77
SSBP3-214ENST00000533209 CX3CR1P49238 355 aa10.24□□□□□ -0.77
SSBP3-214ENST00000533209 MMP15P51511 669 aa10.24□□□□□ -0.77
SSBP3-214ENST00000533209 MOGQ16653 247 aa10.24□□□□□ -0.77
SSBP3-214ENST00000533209 SNAI3Q3KNW1 292 aa10.24□□□□□ -0.77
SSBP3-214ENST00000533209 LRRN1Q6UXK5 716 aa10.24□□□□□ -0.77
SSBP3-214ENST00000533209 DNM1P46Q6ZS02 220 aa10.24□□□□□ -0.77
SSBP3-214ENST00000533209 PRSS45Q7RTY3 260 aa10.24□□□□□ -0.77
SSBP3-214ENST00000533209 TGIF2LYQ8IUE0 185 aa10.24□□□□□ -0.77
SSBP3-214ENST00000533209 SLC35F2Q8IXU6 374 aa10.24□□□□□ -0.77
SSBP3-214ENST00000533209 RFLNBQ8N5W9 214 aa10.24□□□□□ -0.77
SSBP3-214ENST00000533209 ZNF283Q8N7M2 679 aa10.24□□□□□ -0.77
SSBP3-214ENST00000533209 OR51G2Q8NGK0 314 aa10.24□□□□□ -0.77
SSBP3-214ENST00000533209 NRG4Q8WWG1 115 aa10.24□□□□□ -0.77
SSBP3-214ENST00000533209 RFKQ969G6 155 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms