RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 FOXH1O75593 365 aa19.79■□□□□ 0.76
SMPD1-209ENST00000533196 CCNB2O95067 398 aa19.79■□□□□ 0.76
SMPD1-209ENST00000533196 HLA-DQA2P01906 255 aa19.79■□□□□ 0.76
SMPD1-209ENST00000533196 CALB2P22676 271 aa19.79■□□□□ 0.76
SMPD1-209ENST00000533196 GGT2P36268 569 aa19.79■□□□□ 0.76
SMPD1-209ENST00000533196 ERFP50548 548 aa19.79■□□□□ 0.76
SMPD1-209ENST00000533196 HLXQ14774 488 aaPredicted RBP19.79■□□□□ 0.76
SMPD1-209ENST00000533196 RSPO1Q2MKA7 263 aaPredicted RBP19.79■□□□□ 0.76
SMPD1-209ENST00000533196 DCAF12L2Q5VW00 463 aa19.79■□□□□ 0.76
SMPD1-209ENST00000533196 ZNF770Q6IQ21 691 aaPredicted RBP19.79■□□□□ 0.76
SMPD1-209ENST00000533196 KLHL36Q8N4N3 616 aa19.79■□□□□ 0.76
SMPD1-209ENST00000533196 OR9Q2Q8NGE9 314 aa19.79■□□□□ 0.76
SMPD1-209ENST00000533196 OR2T4Q8NH00 348 aa19.79■□□□□ 0.76
SMPD1-209ENST00000533196 ZFAND2BQ8WV99 257 aa19.79■□□□□ 0.76
SMPD1-209ENST00000533196 OR2V2Q96R30 315 aa19.79■□□□□ 0.76
SMPD1-209ENST00000533196 DDOQ99489 341 aa19.79■□□□□ 0.76
SMPD1-209ENST00000533196 PITX2Q99697 317 aa19.79■□□□□ 0.76
SMPD1-209ENST00000533196 OCEL1Q9H607 264 aa19.79■□□□□ 0.76
SMPD1-209ENST00000533196 EGLN3Q9H6Z9 239 aa19.79■□□□□ 0.76
SMPD1-209ENST00000533196 PCDHB10Q9UN67 800 aa19.79■□□□□ 0.76
SMPD1-209ENST00000533196 BAIAP2Q9UQB8 552 aa19.79■□□□□ 0.76
SMPD1-209ENST00000533196 IQCF6A8MYZ5 107 aa19.78■□□□□ 0.76
SMPD1-209ENST00000533196 FAM107AO95990 144 aa19.78■□□□□ 0.76
SMPD1-209ENST00000533196 ACSM4P0C7M7 580 aa19.78■□□□□ 0.76
SMPD1-209ENST00000533196 ZNF823P16415 610 aa19.78■□□□□ 0.76
SMPD1-209ENST00000533196 CPT2P23786 658 aa19.78■□□□□ 0.76
SMPD1-209ENST00000533196 SRP9P49458 86 aaKnown RBP19.78■□□□□ 0.76
SMPD1-209ENST00000533196 SRSF2Q01130 221 aaKnown RBP19.78■□□□□ 0.76
SMPD1-209ENST00000533196 GK3PQ14409 553 aa19.78■□□□□ 0.76
SMPD1-209ENST00000533196 CLEC12AQ5QGZ9 265 aa19.78■□□□□ 0.76
SMPD1-209ENST00000533196 OR2T2Q6IF00 324 aa19.78■□□□□ 0.76
SMPD1-209ENST00000533196 CFAP77Q6ZQR2 320 aa19.78■□□□□ 0.76
SMPD1-209ENST00000533196 C1QL2Q7Z5L3 287 aa19.78■□□□□ 0.76
SMPD1-209ENST00000533196 LRRC28Q86X40 367 aaPredicted RBP19.78■□□□□ 0.76
SMPD1-209ENST00000533196 LINC00346Q8IVM7 164 aa19.78■□□□□ 0.76
SMPD1-209ENST00000533196 ATG16L2Q8NAA4 619 aa19.78■□□□□ 0.76
SMPD1-209ENST00000533196 HCAR1Q9BXC0 346 aa19.78■□□□□ 0.76
SMPD1-209ENST00000533196 TMPRSS13Q9BYE2 586 aa19.78■□□□□ 0.76
SMPD1-209ENST00000533196 FN3KQ9H479 309 aa19.78■□□□□ 0.76
SMPD1-209ENST00000533196 UBAP1Q9NZ09 502 aa19.78■□□□□ 0.76
SMPD1-209ENST00000533196 PRPF19Q9UMS4 504 aaKnown RBP19.78■□□□□ 0.76
SMPD1-209ENST00000533196 GASTP01350 101 aa19.77■□□□□ 0.76
SMPD1-209ENST00000533196 SBK2P0C263 348 aa19.77■□□□□ 0.76
SMPD1-209ENST00000533196 BTG1P62324 171 aa19.77■□□□□ 0.76
SMPD1-209ENST00000533196 FAM98BQ52LJ0 330 aaKnown RBP19.77■□□□□ 0.76
SMPD1-209ENST00000533196 SLC35F1Q5T1Q4 408 aa19.77■□□□□ 0.76
SMPD1-209ENST00000533196 MUC20Q8N307 709 aaPredicted RBP19.77■□□□□ 0.76
SMPD1-209ENST00000533196 LNX2Q8N448 690 aa19.77■□□□□ 0.76
SMPD1-209ENST00000533196 CCDC197Q8NCU1 140 aa19.77■□□□□ 0.76
SMPD1-209ENST00000533196 ZNF418Q8TF45 676 aaPredicted RBP19.77■□□□□ 0.76
SMPD1-209ENST00000533196 SIGLEC11Q96RL6 698 aa19.77■□□□□ 0.76
SMPD1-209ENST00000533196 SLC30A2Q9BRI3 323 aa19.77■□□□□ 0.76
SMPD1-209ENST00000533196 REEP1Q9H902 201 aa19.77■□□□□ 0.76
SMPD1-209ENST00000533196 PATZ1Q9HBE1 687 aaKnown RBP19.77■□□□□ 0.76
SMPD1-209ENST00000533196 GCM1Q9NP62 436 aa19.77■□□□□ 0.76
SMPD1-209ENST00000533196 PNRC2Q9NPJ4 139 aaKnown RBP19.77■□□□□ 0.76
SMPD1-209ENST00000533196 MRPL22Q9NWU5 206 aaKnown RBP19.77■□□□□ 0.76
SMPD1-209ENST00000533196 POLR3KQ9Y2Y1 108 aaPredicted RBP19.77■□□□□ 0.76
SMPD1-209ENST00000533196 DOCK11Q5JSL3 2073 aa19.77■□□□□ 0.75
SMPD1-209ENST00000533196 A0A1B0GWJ7 208 aa19.76■□□□□ 0.75
SMPD1-209ENST00000533196 F5H5K5 113 aa19.76■□□□□ 0.75
SMPD1-209ENST00000533196 AVPP01185 164 aa19.76■□□□□ 0.75
SMPD1-209ENST00000533196 MDH2P40926 338 aaKnown RBP19.76■□□□□ 0.75
SMPD1-209ENST00000533196 TPTEP56180 551 aa19.76■□□□□ 0.75
SMPD1-209ENST00000533196 TRAP1Q12931 704 aaKnown RBP19.76■□□□□ 0.75
SMPD1-209ENST00000533196 MALLQ13021 153 aa19.76■□□□□ 0.75
SMPD1-209ENST00000533196 OR2T5Q6IEZ7 315 aa19.76■□□□□ 0.75
SMPD1-209ENST00000533196 C1orf229Q6ZS94 237 aaPredicted RBP19.76■□□□□ 0.75
SMPD1-209ENST00000533196 USP43Q70EL4 1123 aa19.76■□□□□ 0.75
SMPD1-209ENST00000533196 OR5AS1Q8N127 324 aa19.76■□□□□ 0.75
SMPD1-209ENST00000533196 PROKR2Q8NFJ6 384 aa19.76■□□□□ 0.75
SMPD1-209ENST00000533196 OR2T29Q8NH02 315 aa19.76■□□□□ 0.75
SMPD1-209ENST00000533196 NANPQ8TBE9 248 aa19.76■□□□□ 0.75
SMPD1-209ENST00000533196 DGCR6LQ9BY27 220 aa19.76■□□□□ 0.75
SMPD1-209ENST00000533196 DCAF16Q9NXF7 216 aa19.76■□□□□ 0.75
SMPD1-209ENST00000533196 TMEM178BH3BS89 294 aa19.75■□□□□ 0.75
SMPD1-209ENST00000533196 MMP16P51512 607 aa19.75■□□□□ 0.75
SMPD1-209ENST00000533196 MICAQ29983 383 aa19.75■□□□□ 0.75
SMPD1-209ENST00000533196 ZNF181Q2M3W8 571 aa19.75■□□□□ 0.75
SMPD1-209ENST00000533196 ZNF362Q5T0B9 420 aaPredicted RBP19.75■□□□□ 0.75
SMPD1-209ENST00000533196 SPTSSAQ969W0 71 aa19.75■□□□□ 0.75
SMPD1-209ENST00000533196 ASB9Q96DX5 294 aa19.75■□□□□ 0.75
SMPD1-209ENST00000533196 MEGF10Q96KG7 1140 aa19.75■□□□□ 0.75
SMPD1-209ENST00000533196 PLA2G12AQ9BZM1 189 aa19.75■□□□□ 0.75
SMPD1-209ENST00000533196 C1orf21Q9H246 121 aa19.75■□□□□ 0.75
SMPD1-209ENST00000533196 C7orf69Q9H7B7 122 aa19.75■□□□□ 0.75
SMPD1-209ENST00000533196 TBC1D23Q9NUY8 699 aa19.75■□□□□ 0.75
SMPD1-209ENST00000533196 TMEM100Q9NV29 134 aa19.75■□□□□ 0.75
SMPD1-209ENST00000533196 SAMHD1Q9Y3Z3 626 aaKnown RBP19.75■□□□□ 0.75
SMPD1-209ENST00000533196 LOC105371242A0A075B767 164 aa19.74■□□□□ 0.75
SMPD1-209ENST00000533196 A8MXK9 166 aa19.74■□□□□ 0.75
SMPD1-209ENST00000533196 FSTL3O95633 263 aa19.74■□□□□ 0.75
SMPD1-209ENST00000533196 EPHA1P21709 976 aa19.74■□□□□ 0.75
SMPD1-209ENST00000533196 LCN2P80188 198 aa19.74■□□□□ 0.75
SMPD1-209ENST00000533196 GK2Q14410 553 aaPredicted RBP19.74■□□□□ 0.75
SMPD1-209ENST00000533196 CELF2-AS1Q8N7Q2 184 aa19.74■□□□□ 0.75
SMPD1-209ENST00000533196 AQP11Q8NBQ7 271 aa19.74■□□□□ 0.75
SMPD1-209ENST00000533196 SLC37A3Q8NCC5 494 aa19.74■□□□□ 0.75
SMPD1-209ENST00000533196 OR8D4Q8NGM9 314 aa19.74■□□□□ 0.75
SMPD1-209ENST00000533196 MAP6Q96JE9 813 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms