RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 ZNF620Q6ZNG0 422 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 RFPL4BQ6ZWI9 263 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 C1QL4Q86Z23 238 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 LRRC18Q8N456 261 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 NPEPL1Q8NDH3 523 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 OR2T29Q8NH02 315 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 ABHD4Q8TB40 342 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 SSMEM1Q8WWF3 244 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 RAB40AQ8WXH6 277 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 TAMM41Q96BW9 452 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 HSH2DQ96JZ2 352 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 ZNF607Q96SK3 696 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 GABARAPL1Q9H0R8 117 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 MSL2Q9HCI7 577 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 NANSQ9NR45 359 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 MAN2C1Q9NTJ4 1040 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 DCAF16Q9NXF7 216 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 TAS2R5Q9NYW4 299 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 KIF17Q9P2E2 1029 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 ASH2LQ9UBL3 628 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 MIOXQ9UGB7 285 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 ZNF229Q9UJW7 825 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 SLC13A4Q9UKG4 626 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 PPP1R3CQ9UQK1 317 aa10.41□□□□□ -0.74
CAPN1-223ENST00000533079 SAC3D1A6NKF1 404 aa10.4□□□□□ -0.74
CAPN1-223ENST00000533079 GNGT2O14610 69 aa10.4□□□□□ -0.74
CAPN1-223ENST00000533079 TSPAN15O95858 294 aa10.4□□□□□ -0.74
CAPN1-223ENST00000533079 ALPLP05186 524 aa10.4□□□□□ -0.74
CAPN1-223ENST00000533079 RPSAP08865 295 aaKnown RBP10.4□□□□□ -0.74
CAPN1-223ENST00000533079 WNT2P09544 360 aa10.4□□□□□ -0.74
CAPN1-223ENST00000533079 GSTM3P21266 225 aa10.4□□□□□ -0.74
CAPN1-223ENST00000533079 DAP3P51398 398 aaKnown RBP10.4□□□□□ -0.74
CAPN1-223ENST00000533079 PROK1P58294 105 aa10.4□□□□□ -0.74
CAPN1-223ENST00000533079 RFX4Q33E94 735 aa10.4□□□□□ -0.74
CAPN1-223ENST00000533079 KPRPQ5T749 579 aaPredicted RBP10.4□□□□□ -0.74
CAPN1-223ENST00000533079 LINC00114Q6XXX2 140 aa10.4□□□□□ -0.74
CAPN1-223ENST00000533079 COMTD1Q86VU5 262 aa10.4□□□□□ -0.74
CAPN1-223ENST00000533079 JAZF1Q86VZ6 243 aa10.4□□□□□ -0.74
CAPN1-223ENST00000533079 ALDH16A1Q8IZ83 802 aa10.4□□□□□ -0.74
CAPN1-223ENST00000533079 MRPL13Q9BYD1 178 aaKnown RBP10.4□□□□□ -0.74
CAPN1-223ENST00000533079 ANKRD60Q9BZ19 345 aa10.4□□□□□ -0.74
CAPN1-223ENST00000533079 MARCH7Q9H992 704 aa10.4□□□□□ -0.74
CAPN1-223ENST00000533079 TCF7L1Q9HCS4 588 aa10.4□□□□□ -0.74
CAPN1-223ENST00000533079 SMPD3Q9NY59 655 aaPredicted RBP10.4□□□□□ -0.74
CAPN1-223ENST00000533079 LOC100509620A0A075B734 347 aa10.39□□□□□ -0.75
CAPN1-223ENST00000533079 KIR2DS1A0A191URI9 304 aa10.39□□□□□ -0.75
CAPN1-223ENST00000533079 MCIDASD6RGH6 385 aa10.39□□□□□ -0.75
CAPN1-223ENST00000533079 TMEM178BH3BS89 294 aa10.39□□□□□ -0.75
CAPN1-223ENST00000533079 MELTFP08582 738 aa10.39□□□□□ -0.75
CAPN1-223ENST00000533079 ASAH2BP0C7U1 165 aa10.39□□□□□ -0.75
CAPN1-223ENST00000533079 ZNF32P17041 273 aa10.39□□□□□ -0.75
CAPN1-223ENST00000533079 RHCEP18577 417 aa10.39□□□□□ -0.75
CAPN1-223ENST00000533079 CD247P20963 164 aa10.39□□□□□ -0.75
CAPN1-223ENST00000533079 KRTAP10-3P60369 221 aa10.39□□□□□ -0.75
CAPN1-223ENST00000533079 BLMHQ13867 455 aa10.39□□□□□ -0.75
CAPN1-223ENST00000533079 BEAN1Q3B7T3 259 aa10.39□□□□□ -0.75
CAPN1-223ENST00000533079 SLC36A3Q495N2 470 aa10.39□□□□□ -0.75
CAPN1-223ENST00000533079 SPRNQ5BIV9 151 aa10.39□□□□□ -0.75
CAPN1-223ENST00000533079 BRD3OSQ6XYD6 125 aa10.39□□□□□ -0.75
CAPN1-223ENST00000533079 NLRC3Q7RTR2 1065 aa10.39□□□□□ -0.75
CAPN1-223ENST00000533079 NANOGNBQ7Z5D8 188 aa10.39□□□□□ -0.75
CAPN1-223ENST00000533079 TSEN54Q7Z6J9 526 aaKnown RBP10.39□□□□□ -0.75
CAPN1-223ENST00000533079 VTCN1Q7Z7D3 282 aa10.39□□□□□ -0.75
CAPN1-223ENST00000533079 KLBQ86Z14 1044 aa10.39□□□□□ -0.75
CAPN1-223ENST00000533079 LINC01006Q8NI28 216 aa10.39□□□□□ -0.75
CAPN1-223ENST00000533079 TBC1D15Q8TC07 691 aa10.39□□□□□ -0.75
CAPN1-223ENST00000533079 NABP1Q96AH0 204 aa10.39□□□□□ -0.75
CAPN1-223ENST00000533079 NEIL1Q96FI4 390 aaPredicted RBP10.39□□□□□ -0.75
CAPN1-223ENST00000533079 NDUFAF4Q9P032 175 aa10.39□□□□□ -0.75
CAPN1-223ENST00000533079 SOX21Q9Y651 276 aaPredicted RBP10.39□□□□□ -0.75
CAPN1-223ENST00000533079 V9GYQ6 96 aa10.39□□□□□ -0.75
CAPN1-223ENST00000533079 A0A1W2PRG6 482 aa10.38□□□□□ -0.75
CAPN1-223ENST00000533079 NPIPB13A6NJU9 1138 aa10.38□□□□□ -0.75
CAPN1-223ENST00000533079 NPIPB4C9JG80 1138 aa10.38□□□□□ -0.75
CAPN1-223ENST00000533079 EI24O14681 340 aa10.38□□□□□ -0.75
CAPN1-223ENST00000533079 TNFRSF13BO14836 293 aaPredicted RBP10.38□□□□□ -0.75
CAPN1-223ENST00000533079 MT-ND1P03886 318 aa10.38□□□□□ -0.75
CAPN1-223ENST00000533079 HIST1H2ABP04908 130 aa10.38□□□□□ -0.75
CAPN1-223ENST00000533079 KITLGP21583 273 aa10.38□□□□□ -0.75
CAPN1-223ENST00000533079 MYF6P23409 242 aa10.38□□□□□ -0.75
CAPN1-223ENST00000533079 MMP16P51512 607 aa10.38□□□□□ -0.75
CAPN1-223ENST00000533079 RPS6KA3P51812 740 aa10.38□□□□□ -0.75
CAPN1-223ENST00000533079 ADARB1P78563 741 aaKnown RBP10.38□□□□□ -0.75
CAPN1-223ENST00000533079 PSG4Q00888 419 aa10.38□□□□□ -0.75
CAPN1-223ENST00000533079 PSG7Q13046 419 aa10.38□□□□□ -0.75
CAPN1-223ENST00000533079 TTC33Q6PID6 262 aaPredicted RBP10.38□□□□□ -0.75
CAPN1-223ENST00000533079 TBPL2Q6SJ96 375 aa10.38□□□□□ -0.75
CAPN1-223ENST00000533079 HIST3H2AQ7L7L0 130 aa10.38□□□□□ -0.75
CAPN1-223ENST00000533079 DHRSXQ8N5I4 330 aa10.38□□□□□ -0.75
CAPN1-223ENST00000533079 OR2Z1Q8NG97 314 aa10.38□□□□□ -0.75
CAPN1-223ENST00000533079 OR8B3Q8NGG8 313 aa10.38□□□□□ -0.75
CAPN1-223ENST00000533079 ASB10Q8WXI3 467 aa10.38□□□□□ -0.75
CAPN1-223ENST00000533079 HIST1H2ACQ93077 130 aa10.38□□□□□ -0.75
CAPN1-223ENST00000533079 TPD52L3Q96J77 140 aa10.38□□□□□ -0.75
CAPN1-223ENST00000533079 COG8Q96MW5 612 aa10.38□□□□□ -0.75
CAPN1-223ENST00000533079 OR8B2Q96RD0 313 aa10.38□□□□□ -0.75
CAPN1-223ENST00000533079 NUDT16L1Q9BRJ7 211 aaKnown RBP10.38□□□□□ -0.75
CAPN1-223ENST00000533079 ADI1Q9BV57 179 aa10.38□□□□□ -0.75
CAPN1-223ENST00000533079 YTHDF1Q9BYJ9 559 aaKnown RBP10.38□□□□□ -0.75
CAPN1-223ENST00000533079 REEP1Q9H902 201 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms