RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 PRPS2P11908 318 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 PTNP21246 168 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 NUP62P37198 522 aaPredicted RBP1.94□□□□□ -2.1
CD44-234ENST00000531873 CCNG1P51959 295 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 ATP5J2P56134 94 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 CLDN6P56747 220 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 MADCAM1Q13477 382 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 MPPED2Q15777 294 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 C5orf64Q2M2E5 130 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 ZNF829Q3KNS6 432 aaPredicted RBP1.94□□□□□ -2.1
CD44-234ENST00000531873 C2orf83Q53S99 150 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 CYB5R2Q6BCY4 276 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 ARL9Q6T311 187 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 ABHD12BQ7Z5M8 362 aaPredicted RBP1.94□□□□□ -2.1
CD44-234ENST00000531873 MRPL55Q7Z7F7 128 aaKnown RBP1.94□□□□□ -2.1
CD44-234ENST00000531873 C12orf56Q8IXR9 622 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 CSGALNACT2Q8N6G5 542 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 C15orf56Q8N910 161 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 NOXO1Q8NFA2 376 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 OR10G4Q8NGN3 311 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 ITFG1Q8TB96 612 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 ZFP90Q8TF47 636 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 TFGQ92734 400 aaPredicted RBP1.94□□□□□ -2.1
CD44-234ENST00000531873 SGTBQ96EQ0 304 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 ZNF799Q96GE5 643 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 ZNF681Q96N22 645 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 AGMATQ9BSE5 352 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 SLC25A2Q9BXI2 301 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 XKR8Q9H6D3 395 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 HAUS4Q9H6D7 363 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 SLC40A1Q9NP59 571 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 ISYNA1Q9NPH2 558 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 MCUBQ9NWR8 336 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 SLC39A1Q9NY26 324 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 SLC17A7Q9P2U7 560 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 UBIAD1Q9Y5Z9 338 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 PCDH11XQ9BZA7 1347 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 CC2D2AQ9P2K1 1620 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 IGLV11-55A0A075B6I3 123 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 TRIM49D1C9J1S8 452 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 C11orf94C9JXX5 98 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 ANKRD65E5RJM6 399 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 H3BN98 237 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 NVLO15381 856 aaKnown RBP1.93□□□□□ -2.1
CD44-234ENST00000531873 SLC16A7O60669 478 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 SLC19A2O60779 497 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 RP2O75695 350 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 ETHE1O95571 254 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 IVLP07476 585 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 RETP07949 1114 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 CD37P11049 281 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 ERGP11308 486 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 PSG2P11465 335 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 MDKP21741 143 aaPredicted RBP1.93□□□□□ -2.1
CD44-234ENST00000531873 WARSP23381 471 aaKnown RBP1.93□□□□□ -2.1
CD44-234ENST00000531873 IL32P24001 234 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 HOXA9P31269 272 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 PFN2P35080 140 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 CSKP41240 450 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 PPICP45877 212 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 UBE2AP49459 152 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 RAB7AP51149 207 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 UBE2E1P51965 193 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 HERVK_113P61574 105 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 TCP10Q12799 353 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 SLAQ13239 276 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 CAPRIN1Q14444 709 aaKnown RBP1.93□□□□□ -2.1
CD44-234ENST00000531873 ZNF266Q14584 549 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 CHRFAM7AQ494W8 412 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 TPRG1LQ5T0D9 272 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 THEM4Q5T1C6 240 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 LCE3AQ5TA76 89 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 ZNF530Q6P9A1 599 aaPredicted RBP1.93□□□□□ -2.1
CD44-234ENST00000531873 TMEM205Q6UW68 189 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 FAM92BQ6ZTR7 304 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 SLC35D2Q76EJ3 337 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 UNC93AQ86WB7 457 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 FAM58AQ8N1B3 248 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 RNF175Q8N4F7 328 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 ARIH2OSQ8N7S6 290 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 Q8N976 141 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 GATSQ8NAP1 163 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 GPR26Q8NDV2 337 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 DUSP18Q8NEJ0 188 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 OR13C9Q8NGT0 318 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 ZNF596Q8TC21 504 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 RNF138Q8WVD3 245 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 RGP1Q92546 391 aaPredicted RBP1.93□□□□□ -2.1
CD44-234ENST00000531873 FAM104AQ969W3 186 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 NTAN1Q96AB6 310 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 TMIGD2Q96BF3 282 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 UBE2E2Q96LR5 201 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 CFAP53Q96M91 514 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 SCGB3A2Q96PL1 93 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 SIKE1Q9BRV8 207 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 CALN1Q9BXU9 219 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 SAMD10Q9BYL1 202 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 CHRNA10Q9GZZ6 450 aa1.93□□□□□ -2.1
CD44-234ENST00000531873 PARP12Q9H0J9 701 aaKnown RBP1.93□□□□□ -2.1
CD44-234ENST00000531873 GAL3ST2Q9H3Q3 398 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms