RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 SNX13Q9Y5W8 968 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 CAPN7Q9Y6W3 813 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 A0A1B0GW55 424 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 C12orf71A8MTZ7 269 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 FAM220BPB1ANY3 271 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 TOX4O94842 621 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 DUX4L2P0CJ85 424 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 DUX4L3P0CJ86 424 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 DUX4L4P0CJ87 422 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 DUX4L5P0CJ88 424 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 DUX4L6P0CJ89 424 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 DUX4L7P0CJ90 424 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 IFI30P13284 250 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 KITLGP21583 273 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 TNFSF4P23510 183 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 PAX6P26367 422 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 IER3P46695 156 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 HTR5AP47898 357 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 CTXN1P60606 82 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 RPL27P61353 136 aaKnown RBP7.41□□□□□ -1.22
USF1-210ENST00000531842 PDCD1Q15116 288 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 C2orf68Q2NKX9 166 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 LRRC23Q53EV4 343 aaPredicted RBP7.41□□□□□ -1.22
USF1-210ENST00000531842 CYBRD1Q53TN4 286 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 SFRP4Q6FHJ7 346 aaPredicted RBP7.41□□□□□ -1.22
USF1-210ENST00000531842 DUX4L9Q6RFH8 374 aaPredicted RBP7.41□□□□□ -1.22
USF1-210ENST00000531842 PIGWQ7Z7B1 504 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 ZER1Q7Z7L7 766 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 ZSCAN4Q8NAM6 433 aaPredicted RBP7.41□□□□□ -1.22
USF1-210ENST00000531842 OR51A7Q8NH64 312 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 FNDC8Q8TC99 324 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 SSMEM1Q8WWF3 244 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 DYRK2Q92630 601 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 HAVCR1Q96D42 359 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 BPIFA2Q96DR5 249 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 TECTBQ96PL2 329 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 ALG12Q9BV10 488 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 UFSP2Q9NUQ7 469 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 ACOXLQ9NUZ1 547 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 AURKAIP1Q9NWT8 199 aaPredicted RBP7.41□□□□□ -1.22
USF1-210ENST00000531842 FAM53CQ9NYF3 392 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 DUX4Q9UBX2 424 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 MIOXQ9UGB7 285 aa7.41□□□□□ -1.22
USF1-210ENST00000531842 IGHV1-69DA0A0B4J2H0 117 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 A6NIZ1 184 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 ZNF879B4DU55 563 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 FFAR1O14842 300 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 DOK2O60496 412 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 ICMTO60725 284 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 IGF2P01344 180 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 IGHV1-69P01742 117 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 CST2P09228 141 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 GSTM3P21266 225 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 MSR1P21757 451 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 ANOS1P23352 680 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 KDELR2P33947 212 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 RPL4P36578 427 aaKnown RBP7.4□□□□□ -1.22
USF1-210ENST00000531842 YAP1P46937 504 aaKnown RBP7.4□□□□□ -1.22
USF1-210ENST00000531842 SLC7A2P52569 658 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 RAP1BP61224 184 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 ARF6P62330 175 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 RAP1AP62834 184 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 LIPEQ05469 1076 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 ST3GAL3Q11203 375 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 KLRD1Q13241 179 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 FHL1Q13642 323 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 MPPED2Q15777 294 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 FAM205BPQ63HN1 556 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 ERICH5Q6P6B1 374 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 C1orf122Q6ZSJ8 110 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 VTCN1Q7Z7D3 282 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 OAFQ86UD1 273 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 LIPHQ8WWY8 451 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 LZICQ8WZA0 190 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 FAM71F1Q96KD3 344 aaPredicted RBP7.4□□□□□ -1.22
USF1-210ENST00000531842 WDFY2Q96P53 400 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 FNDC11Q9BVV2 318 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 FAM107BQ9H098 131 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 SIRPDQ9H106 197 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 MMADHCQ9H3L0 296 aaPredicted RBP7.4□□□□□ -1.22
USF1-210ENST00000531842 MAN2C1Q9NTJ4 1040 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 RHCGQ9UBD6 479 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 ABCD2Q9UBJ2 740 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 CGGBP1Q9UFW8 167 aaPredicted RBP7.4□□□□□ -1.22
USF1-210ENST00000531842 NDRG4Q9ULP0 352 aaKnown RBP7.4□□□□□ -1.22
USF1-210ENST00000531842 A4GNTQ9UNA3 340 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 HIF3AQ9Y2N7 669 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 POMT1Q9Y6A1 747 aa7.4□□□□□ -1.22
USF1-210ENST00000531842 TRAV27A0A087WT01 109 aa7.39□□□□□ -1.23
USF1-210ENST00000531842 ELOVL7A1L3X0 281 aa7.39□□□□□ -1.23
USF1-210ENST00000531842 HTR3EA5X5Y0 456 aa7.39□□□□□ -1.23
USF1-210ENST00000531842 NPIPB13A6NJU9 1138 aa7.39□□□□□ -1.23
USF1-210ENST00000531842 EFCAB9A8MZ26 197 aa7.39□□□□□ -1.23
USF1-210ENST00000531842 NPIPB4C9JG80 1138 aa7.39□□□□□ -1.23
USF1-210ENST00000531842 H3BSA7 217 aa7.39□□□□□ -1.23
USF1-210ENST00000531842 J3KTA2 159 aa7.39□□□□□ -1.23
USF1-210ENST00000531842 XKRYO14609 159 aa7.39□□□□□ -1.23
USF1-210ENST00000531842 SURF4O15260 269 aa7.39□□□□□ -1.23
USF1-210ENST00000531842 CCDC22O60826 627 aa7.39□□□□□ -1.23
USF1-210ENST00000531842 FAM20BO75063 409 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms