RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 SLC16A7O60669 478 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 FAM20BO75063 409 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 GYPAP02724 150 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 GRPP07492 148 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 SLC9A3P48764 834 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 NPY4RP50391 375 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 RAD23AP54725 363 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 PRB3Q04118 309 aaPredicted RBP7.65□□□□□ -1.18
NEDD8-206ENST00000531430 MPPED2Q15777 294 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 VMACQ2NL98 169 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 BEAN1Q3B7T3 259 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 CCDC92Q53HC0 331 aaPredicted RBP7.65□□□□□ -1.18
NEDD8-206ENST00000531430 TNFAIP8L3Q5GJ75 292 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 BEND6Q5SZJ8 279 aaPredicted RBP7.65□□□□□ -1.18
NEDD8-206ENST00000531430 WDR93Q6P2C0 686 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 ZNF841Q6ZN19 808 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 Q6ZPA2 131 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 FOXL2NBQ6ZUU3 175 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 BTN2A1Q7KYR7 527 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 NRMQ8IXM6 262 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 ZSCAN4Q8NAM6 433 aaPredicted RBP7.65□□□□□ -1.18
NEDD8-206ENST00000531430 LRRC8CQ8TDW0 803 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 SPRYD4Q8WW59 207 aaPredicted RBP7.65□□□□□ -1.18
NEDD8-206ENST00000531430 LIPHQ8WWY8 451 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 LRTOMTQ8WZ04 291 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 LZICQ8WZA0 190 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 ST8SIA4Q92187 359 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 SGCDQ92629 289 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 APOBEC3DQ96AK3 386 aaPredicted RBP7.65□□□□□ -1.18
NEDD8-206ENST00000531430 DACT3Q96B18 629 aaPredicted RBP7.65□□□□□ -1.18
NEDD8-206ENST00000531430 SLCO4A1Q96BD0 722 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 ITPKCQ96DU7 683 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 Q96M85 177 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 ECSITQ9BQ95 431 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 WACQ9BTA9 647 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 PCDHAC1Q9H158 963 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 SEMA6AQ9H2E6 1030 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 KAT8Q9H7Z6 458 aaKnown RBP7.65□□□□□ -1.18
NEDD8-206ENST00000531430 ONECUT1Q9UBC0 465 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 RNF7Q9UBF6 113 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 RPS6KA6Q9UK32 745 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 GMEB1Q9Y692 573 aa7.65□□□□□ -1.18
NEDD8-206ENST00000531430 C5orf63A6NC05 138 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 NPIPB13A6NJU9 1138 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 NPIPB4C9JG80 1138 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 F5H5K5 113 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 KHDRBS3O75525 346 aaKnown RBP7.64□□□□□ -1.19
NEDD8-206ENST00000531430 IFNA14P01570 189 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 LCATP04180 440 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 TSPAN19P0C672 248 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 MRPL19P49406 292 aaKnown RBP7.64□□□□□ -1.19
NEDD8-206ENST00000531430 RGS6P49758 472 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 SLC18A1P54219 525 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 RPL15P61313 204 aaKnown RBP7.64□□□□□ -1.19
NEDD8-206ENST00000531430 ST3GAL3Q11203 375 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 MAB21L1Q13394 359 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 AQP6Q13520 282 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 OR8G1Q15617 311 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 KCNJ8Q15842 424 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 ZNF181Q2M3W8 571 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 SLC35E4Q6ICL7 350 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 CORO6Q6QEF8 472 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 FBXW12Q6X9E4 464 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 RRM2BQ7LG56 351 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 LYG1Q8N1E2 194 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 LRRC75AQ8NAA5 344 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 OR13C2Q8NGS9 318 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 ZNF583Q96ND8 569 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 FNDC11Q9BVV2 318 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 NSRP1Q9H0G5 558 aaKnown RBP7.64□□□□□ -1.19
NEDD8-206ENST00000531430 PPA2Q9H2U2 334 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 RABEP2Q9H5N1 569 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 CNTD2Q9H8S5 307 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 FN3KRPQ9HA64 309 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.64□□□□□ -1.19
NEDD8-206ENST00000531430 CTSZQ9UBR2 303 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 SIGLEC9Q9Y336 463 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 CAB39Q9Y376 341 aaPredicted RBP7.64□□□□□ -1.19
NEDD8-206ENST00000531430 ADAM18Q9Y3Q7 739 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 N6AMT1Q9Y5N5 214 aa7.64□□□□□ -1.19
NEDD8-206ENST00000531430 TET2Q6N021 2002 aaPredicted RBP7.63□□□□□ -1.19
NEDD8-206ENST00000531430 IGHV3OR15-7A0A075B7D8 119 aa7.63□□□□□ -1.19
NEDD8-206ENST00000531430 hCG_1807616A0A1W2PRN6 198 aa7.63□□□□□ -1.19
NEDD8-206ENST00000531430 OR6C6A6NF89 314 aa7.63□□□□□ -1.19
NEDD8-206ENST00000531430 A6NLC8 198 aa7.63□□□□□ -1.19
NEDD8-206ENST00000531430 IQCF6A8MYZ5 107 aa7.63□□□□□ -1.19
NEDD8-206ENST00000531430 LGALS8O00214 317 aa7.63□□□□□ -1.19
NEDD8-206ENST00000531430 IMPA2O14732 288 aa7.63□□□□□ -1.19
NEDD8-206ENST00000531430 OR10H3O60404 316 aa7.63□□□□□ -1.19
NEDD8-206ENST00000531430 PAHP00439 452 aa7.63□□□□□ -1.19
NEDD8-206ENST00000531430 MMP9P14780 707 aa7.63□□□□□ -1.19
NEDD8-206ENST00000531430 CTLA4P16410 223 aa7.63□□□□□ -1.19
NEDD8-206ENST00000531430 CA6P23280 308 aa7.63□□□□□ -1.19
NEDD8-206ENST00000531430 EEF1B2P24534 225 aaKnown RBP7.63□□□□□ -1.19
NEDD8-206ENST00000531430 PSMB10P40306 273 aa7.63□□□□□ -1.19
NEDD8-206ENST00000531430 LOXL3P58215 753 aa7.63□□□□□ -1.19
NEDD8-206ENST00000531430 MALLQ13021 153 aa7.63□□□□□ -1.19
NEDD8-206ENST00000531430 CYLC2Q14093 348 aaPredicted RBP7.63□□□□□ -1.19
NEDD8-206ENST00000531430 NSUN5P1Q3KNT7 163 aa7.63□□□□□ -1.19
NEDD8-206ENST00000531430 LRRC23Q53EV4 343 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms