RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 J3QW42 95 aa15.37■□□□□ 0.05
SSSCA1-206ENST00000531405 DCTN6O00399 190 aa15.37■□□□□ 0.05
SSSCA1-206ENST00000531405 GSTA4O15217 222 aa15.37■□□□□ 0.05
SSSCA1-206ENST00000531405 SERPINA1P01009 418 aa15.37■□□□□ 0.05
SSSCA1-206ENST00000531405 CDKN2AP42771 156 aaKnown RBP15.37■□□□□ 0.05
SSSCA1-206ENST00000531405 PITPNBP48739 271 aa15.37■□□□□ 0.05
SSSCA1-206ENST00000531405 FXYD6P3P58550 94 aa15.37■□□□□ 0.05
SSSCA1-206ENST00000531405 HOXA4Q00056 320 aaPredicted RBP15.37■□□□□ 0.05
SSSCA1-206ENST00000531405 SRSF4Q08170 494 aaKnown RBP15.37■□□□□ 0.05
SSSCA1-206ENST00000531405 DEFB112Q30KQ8 113 aa15.37■□□□□ 0.05
SSSCA1-206ENST00000531405 C16orf87Q6PH81 154 aa15.37■□□□□ 0.05
SSSCA1-206ENST00000531405 LYPD2Q6UXB3 125 aa15.37■□□□□ 0.05
SSSCA1-206ENST00000531405 HDXQ7Z353 690 aa15.37■□□□□ 0.05
SSSCA1-206ENST00000531405 OR8B3Q8NGG8 313 aa15.37■□□□□ 0.05
SSSCA1-206ENST00000531405 OR10S1Q8NGN2 331 aa15.37■□□□□ 0.05
SSSCA1-206ENST00000531405 PLEKHA8Q96JA3 519 aa15.37■□□□□ 0.05
SSSCA1-206ENST00000531405 OR8B2Q96RD0 313 aa15.37■□□□□ 0.05
SSSCA1-206ENST00000531405 NUDT16L1Q9BRJ7 211 aaKnown RBP15.37■□□□□ 0.05
SSSCA1-206ENST00000531405 CDADC1Q9BWV3 514 aa15.37■□□□□ 0.05
SSSCA1-206ENST00000531405 SLITRK2Q9H156 845 aa15.37■□□□□ 0.05
SSSCA1-206ENST00000531405 ATPIF1Q9UII2 106 aa15.37■□□□□ 0.05
SSSCA1-206ENST00000531405 RPS6KA6Q9UK32 745 aa15.37■□□□□ 0.05
SSSCA1-206ENST00000531405 TMEM5Q9Y2B1 443 aa15.37■□□□□ 0.05
SSSCA1-206ENST00000531405 CAPN7Q9Y6W3 813 aa15.37■□□□□ 0.05
SSSCA1-206ENST00000531405 KIR2DS1A0A191URI9 304 aa15.36■□□□□ 0.05
SSSCA1-206ENST00000531405 NME4O00746 187 aa15.36■□□□□ 0.05
SSSCA1-206ENST00000531405 FGF12P61328 243 aa15.36■□□□□ 0.05
SSSCA1-206ENST00000531405 HIST1H3AP68431 136 aa15.36■□□□□ 0.05
SSSCA1-206ENST00000531405 KCNMB1Q16558 191 aa15.36■□□□□ 0.05
SSSCA1-206ENST00000531405 RSPO1Q2MKA7 263 aaPredicted RBP15.36■□□□□ 0.05
SSSCA1-206ENST00000531405 FGD3Q5JSP0 725 aa15.36■□□□□ 0.05
SSSCA1-206ENST00000531405 HIST2H3PS2Q5TEC6 136 aa15.36■□□□□ 0.05
SSSCA1-206ENST00000531405 GPR139Q6DWJ6 353 aa15.36■□□□□ 0.05
SSSCA1-206ENST00000531405 HIST2H3AQ71DI3 136 aa15.36■□□□□ 0.05
SSSCA1-206ENST00000531405 FITM2Q8N6M3 262 aa15.36■□□□□ 0.05
SSSCA1-206ENST00000531405 RSRC1Q96IZ7 334 aaKnown RBP15.36■□□□□ 0.05
SSSCA1-206ENST00000531405 GPX7Q96SL4 187 aaPredicted RBP15.36■□□□□ 0.05
SSSCA1-206ENST00000531405 COQ7Q99807 217 aa15.36■□□□□ 0.05
SSSCA1-206ENST00000531405 ENPP4Q9Y6X5 453 aa15.36■□□□□ 0.05
SSSCA1-206ENST00000531405 LRRC30A6NM36 301 aa15.35■□□□□ 0.05
SSSCA1-206ENST00000531405 NCK1P16333 377 aa15.35■□□□□ 0.05
SSSCA1-206ENST00000531405 CPT2P23786 658 aa15.35■□□□□ 0.05
SSSCA1-206ENST00000531405 FPR3P25089 353 aa15.35■□□□□ 0.05
SSSCA1-206ENST00000531405 OMPP47874 163 aa15.35■□□□□ 0.05
SSSCA1-206ENST00000531405 SLC7A2P52569 658 aa15.35■□□□□ 0.05
SSSCA1-206ENST00000531405 ZNF181Q2M3W8 571 aa15.35■□□□□ 0.05
SSSCA1-206ENST00000531405 MIDNQ504T8 468 aa15.35■□□□□ 0.05
SSSCA1-206ENST00000531405 RUSC1-AS1Q66K80 236 aa15.35■□□□□ 0.05
SSSCA1-206ENST00000531405 NLRC3Q7RTR2 1065 aa15.35■□□□□ 0.05
SSSCA1-206ENST00000531405 ADCK1Q86TW2 530 aa15.35■□□□□ 0.05
SSSCA1-206ENST00000531405 CYP4Z1Q86W10 505 aa15.35■□□□□ 0.05
SSSCA1-206ENST00000531405 C1orf87Q8N0U7 546 aa15.35■□□□□ 0.05
SSSCA1-206ENST00000531405 GJC3Q8NFK1 279 aa15.35■□□□□ 0.05
SSSCA1-206ENST00000531405 ZDHHC16Q969W1 377 aa15.35■□□□□ 0.05
SSSCA1-206ENST00000531405 HDHD2Q9H0R4 259 aa15.35■□□□□ 0.05
SSSCA1-206ENST00000531405 ANKRD19PQ9H560 264 aa15.35■□□□□ 0.05
SSSCA1-206ENST00000531405 MARCH7Q9H992 704 aa15.35■□□□□ 0.05
SSSCA1-206ENST00000531405 TMEM100Q9NV29 134 aa15.35■□□□□ 0.05
SSSCA1-206ENST00000531405 CLN8Q9UBY8 286 aa15.35■□□□□ 0.05
SSSCA1-206ENST00000531405 FAM181BA6NEQ2 426 aa15.34■□□□□ 0.05
SSSCA1-206ENST00000531405 C22orf46C9J442 243 aa15.34■□□□□ 0.05
SSSCA1-206ENST00000531405 PPP1R3DO95685 299 aa15.34■□□□□ 0.05
SSSCA1-206ENST00000531405 H1F0P07305 194 aaKnown RBP15.34■□□□□ 0.05
SSSCA1-206ENST00000531405 GSK3BP49841 420 aa15.34■□□□□ 0.05
SSSCA1-206ENST00000531405 MAB21L1Q13394 359 aa15.34■□□□□ 0.05
SSSCA1-206ENST00000531405 SEC23BQ15437 767 aa15.34■□□□□ 0.05
SSSCA1-206ENST00000531405 PRAMEF6Q5VXH4 476 aa15.34■□□□□ 0.05
SSSCA1-206ENST00000531405 WDR25Q64LD2 544 aaPredicted RBP15.34■□□□□ 0.05
SSSCA1-206ENST00000531405 ZNF841Q6ZN19 808 aa15.34■□□□□ 0.05
SSSCA1-206ENST00000531405 CFAP77Q6ZQR2 320 aa15.34■□□□□ 0.05
SSSCA1-206ENST00000531405 ARPINQ7Z6K5 226 aa15.34■□□□□ 0.05
SSSCA1-206ENST00000531405 LINC00346Q8IVM7 164 aa15.34■□□□□ 0.05
SSSCA1-206ENST00000531405 KIR3DL3Q8N743 410 aa15.34■□□□□ 0.05
SSSCA1-206ENST00000531405 FAM162AQ96A26 154 aa15.34■□□□□ 0.05
SSSCA1-206ENST00000531405 HCAR1Q9BXC0 346 aa15.34■□□□□ 0.05
SSSCA1-206ENST00000531405 VIPAS39Q9H9C1 493 aa15.34■□□□□ 0.05
SSSCA1-206ENST00000531405 UFSP2Q9NUQ7 469 aa15.34■□□□□ 0.05
SSSCA1-206ENST00000531405 TMCC3Q9ULS5 477 aa15.34■□□□□ 0.05
SSSCA1-206ENST00000531405 AP3M1Q9Y2T2 418 aa15.34■□□□□ 0.05
SSSCA1-206ENST00000531405 IGLV1-36A0A0B4J1U3 117 aa15.33■□□□□ 0.04
SSSCA1-206ENST00000531405 TRBV4-1A0A0J9YWV2 114 aa15.33■□□□□ 0.04
SSSCA1-206ENST00000531405 A0A1B0GWJ7 208 aa15.33■□□□□ 0.04
SSSCA1-206ENST00000531405 A0A1W2PRQ8 180 aa15.33■□□□□ 0.04
SSSCA1-206ENST00000531405 UNC119BA6NIH7 251 aa15.33■□□□□ 0.04
SSSCA1-206ENST00000531405 SRRM5B3KS81 715 aa15.33■□□□□ 0.04
SSSCA1-206ENST00000531405 FAM20BO75063 409 aa15.33■□□□□ 0.04
SSSCA1-206ENST00000531405 IRF2P14316 349 aa15.33■□□□□ 0.04
SSSCA1-206ENST00000531405 RPS6KA3P51812 740 aa15.33■□□□□ 0.04
SSSCA1-206ENST00000531405 COX10Q12887 443 aa15.33■□□□□ 0.04
SSSCA1-206ENST00000531405 DGCR6Q14129 220 aa15.33■□□□□ 0.04
SSSCA1-206ENST00000531405 GK2Q14410 553 aaPredicted RBP15.33■□□□□ 0.04
SSSCA1-206ENST00000531405 FIP1L1Q6UN15 594 aaKnown RBP15.33■□□□□ 0.04
SSSCA1-206ENST00000531405 DPY19L2P2Q6ZN68 376 aa15.33■□□□□ 0.04
SSSCA1-206ENST00000531405 DCDC5Q6ZRR9 648 aa15.33■□□□□ 0.04
SSSCA1-206ENST00000531405 COLCA1Q6ZS62 124 aa15.33■□□□□ 0.04
SSSCA1-206ENST00000531405 NAA40Q86UY6 237 aa15.33■□□□□ 0.04
SSSCA1-206ENST00000531405 WFDC12Q8WWY7 111 aa15.33■□□□□ 0.04
SSSCA1-206ENST00000531405 PCGF1Q9BSM1 259 aa15.33■□□□□ 0.04
SSSCA1-206ENST00000531405 SRA1Q9HD15 236 aaKnown RBP15.33■□□□□ 0.04
SSSCA1-206ENST00000531405 PDP1Q9P0J1 537 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms