RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 CLDN22Q8N7P3 220 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 BEND2Q8NDZ0 799 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 OR8G5Q8NG78 346 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 OR11L1Q8NGX0 322 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 BBS10Q8TAM1 723 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 ASB10Q8WXI3 467 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 NSMAFQ92636 917 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 HAVCR1Q96D42 359 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 NMD3Q96D46 503 aaKnown RBP6.68□□□□□ -1.34
CD44-232ENST00000531118 PPP1R36Q96LQ0 422 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 GPR61Q9BZJ8 451 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 SMURF2Q9HAU4 748 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 PALMDQ9NP74 551 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 TUBG2Q9NRH3 451 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 GFOD1Q9NXC2 390 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 GMNCA6NCL1 334 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 TMEM247A6NEH6 219 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 LGALS8O00214 317 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 FBP2O00757 339 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 HDAC3O15379 428 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 RIPK2O43353 540 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 CH25HO95992 272 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 CHRM2P08172 466 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 LYL1P12980 280 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 RAC2P15153 192 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 ACADSP16219 412 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 CD247P20963 164 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 LAP3P28838 519 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 ALDH3A1P30838 453 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 CDH12P55289 794 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 RGS8P57771 180 aaPredicted RBP6.67□□□□□ -1.34
CD44-232ENST00000531118 ENDOGQ14249 297 aaKnown RBP6.67□□□□□ -1.34
CD44-232ENST00000531118 KCNJ8Q15842 424 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 LRRC75BQ2VPJ9 315 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 INTS11Q5TA45 600 aaKnown RBP6.67□□□□□ -1.34
CD44-232ENST00000531118 FAM27BQ5VT28 67 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 OR2T2Q6IF00 324 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 DHRS4L2Q6PKH6 230 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 RANBP3LQ86VV4 465 aaPredicted RBP6.67□□□□□ -1.34
CD44-232ENST00000531118 Q8N2B8 174 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 FGFRL1Q8N441 504 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 BHLHE23Q8NDY6 225 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 OR13G1Q8NGZ3 307 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 C17orf50Q8WW18 174 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 ST8SIA4Q92187 359 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 ZIM3Q96PE6 472 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 NKX3-1Q99801 234 aaPredicted RBP6.67□□□□□ -1.34
CD44-232ENST00000531118 SSX3Q99909 188 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 ECSITQ9BQ95 431 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 TMEM27Q9HBJ8 222 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 BCL2L10Q9HD36 194 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 PTTG3PQ9NZH4 202 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 DNAJB11Q9UBS4 358 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 ZNF229Q9UJW7 825 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 STARD10Q9Y365 291 aa6.67□□□□□ -1.34
CD44-232ENST00000531118 DNAH10Q8IVF4 4471 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 A0A1B0GW55 424 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 A0A1W2PRG6 482 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 IQCF6A8MYZ5 107 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 KPNA4O00629 521 aaPredicted RBP6.66□□□□□ -1.34
CD44-232ENST00000531118 DVL1O14640 695 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 ZFPL1O95159 310 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 ECDO95905 644 aaPredicted RBP6.66□□□□□ -1.34
CD44-232ENST00000531118 ASAH2BP0C7U1 165 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 DUX4L2P0CJ85 424 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 DUX4L3P0CJ86 424 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 DUX4L4P0CJ87 422 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 DUX4L5P0CJ88 424 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 DUX4L6P0CJ89 424 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 DUX4L7P0CJ90 424 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 COX5BP10606 129 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 FAHP16930 419 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 IL12AP29459 219 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 SERPINB5P36952 375 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 CD200P41217 278 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 RGS6P49758 472 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 DAP3P51398 398 aaKnown RBP6.66□□□□□ -1.34
CD44-232ENST00000531118 BMXP51813 675 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 UGT2B15P54855 530 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 NME5P56597 212 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 PCBD1P61457 104 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 CD47Q08722 323 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 TMEM95Q3KNT9 176 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 GTDC1Q4AE62 458 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 SFRP4Q6FHJ7 346 aaPredicted RBP6.66□□□□□ -1.34
CD44-232ENST00000531118 C1orf94Q6P1W5 598 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 DUX4L9Q6RFH8 374 aaPredicted RBP6.66□□□□□ -1.34
CD44-232ENST00000531118 FBXW12Q6X9E4 464 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 FOXL2NBQ6ZUU3 175 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 MEPCEQ7L2J0 689 aaKnown RBP6.66□□□□□ -1.34
CD44-232ENST00000531118 CMTM4Q8IZR5 234 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 C4orf33Q8N1A6 199 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 DTX3Q8N9I9 347 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 OR51G2Q8NGK0 314 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 RORBQ92753 470 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 HDAC2Q92769 488 aaKnown RBP6.66□□□□□ -1.34
CD44-232ENST00000531118 TNFRSF14Q92956 283 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 MAL2Q969L2 176 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 ERGIC1Q969X5 290 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 VPS33AQ96AX1 596 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms