RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 DNAJC27Q9NZQ0 273 aa13.16□□□□□ -0.3
CCS-206ENST00000530961 LAMP5Q9UJQ1 280 aa13.16□□□□□ -0.3
CCS-206ENST00000530961 FN1P02751 2386 aaKnown RBP13.15□□□□□ -0.3
CCS-206ENST00000530961 CSPG4Q6UVK1 2322 aa13.15□□□□□ -0.3
CCS-206ENST00000530961 OVOL3O00110 214 aa13.15□□□□□ -0.3
CCS-206ENST00000530961 ENTPD6O75354 484 aa13.15□□□□□ -0.3
CCS-206ENST00000530961 ATP6V1G2O95670 118 aa13.15□□□□□ -0.3
CCS-206ENST00000530961 APOC1P02654 83 aa13.15□□□□□ -0.3
CCS-206ENST00000530961 ZNF250P15622 560 aa13.15□□□□□ -0.3
CCS-206ENST00000530961 PAX1P15863 534 aa13.15□□□□□ -0.3
CCS-206ENST00000530961 GABRB1P18505 474 aa13.15□□□□□ -0.3
CCS-206ENST00000530961 OTX1P32242 354 aaPredicted RBP13.15□□□□□ -0.3
CCS-206ENST00000530961 ATP6V1E1P36543 226 aa13.15□□□□□ -0.3
CCS-206ENST00000530961 PPP1CBP62140 327 aa13.15□□□□□ -0.3
CCS-206ENST00000530961 SNRPD2P62316 118 aaKnown RBP13.15□□□□□ -0.3
CCS-206ENST00000530961 ADARB1P78563 741 aaKnown RBP13.15□□□□□ -0.3
CCS-206ENST00000530961 MOGQ16653 247 aa13.15□□□□□ -0.3
CCS-206ENST00000530961 MST1LQ2TV78 715 aa13.15□□□□□ -0.3
CCS-206ENST00000530961 ZNF718Q3SXZ3 478 aa13.15□□□□□ -0.3
CCS-206ENST00000530961 DRAM2Q6UX65 266 aa13.15□□□□□ -0.3
CCS-206ENST00000530961 ENTHD1Q8IYW4 607 aa13.15□□□□□ -0.3
CCS-206ENST00000530961 SETD9Q8NE22 299 aa13.15□□□□□ -0.3
CCS-206ENST00000530961 SYNPRQ8TBG9 265 aa13.15□□□□□ -0.3
CCS-206ENST00000530961 NRG4Q8WWG1 115 aa13.15□□□□□ -0.3
CCS-206ENST00000530961 ASB17Q8WXJ9 295 aa13.15□□□□□ -0.3
CCS-206ENST00000530961 APOBEC3DQ96AK3 386 aaPredicted RBP13.15□□□□□ -0.3
CCS-206ENST00000530961 ADI1Q9BV57 179 aa13.15□□□□□ -0.3
CCS-206ENST00000530961 OR51B6Q9H340 312 aa13.15□□□□□ -0.3
CCS-206ENST00000530961 ADGRL4Q9HBW9 690 aa13.15□□□□□ -0.3
CCS-206ENST00000530961 ZNF701Q9NV72 531 aaPredicted RBP13.15□□□□□ -0.3
CCS-206ENST00000530961 RRP15Q9Y3B9 282 aaKnown RBP13.15□□□□□ -0.3
CCS-206ENST00000530961 HSPE1-MOB4S4R3N1 261 aa13.15□□□□□ -0.3
CCS-206ENST00000530961 PMF1-BGLAPU3KQ54 211 aa13.15□□□□□ -0.3
CCS-206ENST00000530961 M0R135 149 aa13.14□□□□□ -0.31
CCS-206ENST00000530961 PHYHO14832 338 aa13.14□□□□□ -0.31
CCS-206ENST00000530961 NGFP01138 241 aa13.14□□□□□ -0.31
CCS-206ENST00000530961 MRPL3P09001 348 aaKnown RBP13.14□□□□□ -0.31
CCS-206ENST00000530961 SBK2P0C263 348 aa13.14□□□□□ -0.31
CCS-206ENST00000530961 ACSM4P0C7M7 580 aa13.14□□□□□ -0.31
CCS-206ENST00000530961 GCH1P30793 250 aa13.14□□□□□ -0.31
CCS-206ENST00000530961 CAPGP40121 348 aa13.14□□□□□ -0.31
CCS-206ENST00000530961 OPRL1P41146 370 aa13.14□□□□□ -0.31
CCS-206ENST00000530961 MTNR1AP48039 350 aa13.14□□□□□ -0.31
CCS-206ENST00000530961 ZNF691Q5VV52 312 aa13.14□□□□□ -0.31
CCS-206ENST00000530961 MBNL2Q5VZF2 373 aaKnown RBP13.14□□□□□ -0.31
CCS-206ENST00000530961 C11orf71Q6IPW1 123 aa13.14□□□□□ -0.31
CCS-206ENST00000530961 KCTD18Q6PI47 426 aaPredicted RBP13.14□□□□□ -0.31
CCS-206ENST00000530961 DEGS2Q6QHC5 323 aa13.14□□□□□ -0.31
CCS-206ENST00000530961 COLCA1Q6ZS62 124 aa13.14□□□□□ -0.31
CCS-206ENST00000530961 RFPL4BQ6ZWI9 263 aa13.14□□□□□ -0.31
CCS-206ENST00000530961 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.14□□□□□ -0.31
CCS-206ENST00000530961 LRRC75A-AS1Q8N1F1 130 aa13.14□□□□□ -0.31
CCS-206ENST00000530961 TRMT61AQ96FX7 289 aaKnown RBP13.14□□□□□ -0.31
CCS-206ENST00000530961 ZNF799Q96GE5 643 aa13.14□□□□□ -0.31
CCS-206ENST00000530961 MARS2Q96GW9 593 aaKnown RBP13.14□□□□□ -0.31
CCS-206ENST00000530961 DOK1Q99704 481 aa13.14□□□□□ -0.31
CCS-206ENST00000530961 C1QTNF5Q9BXJ0 243 aa13.14□□□□□ -0.31
CCS-206ENST00000530961 NIPAL2Q9H841 368 aa13.14□□□□□ -0.31
CCS-206ENST00000530961 SP140LQ9H930 580 aa13.14□□□□□ -0.31
CCS-206ENST00000530961 SLCO1C1Q9NYB5 712 aa13.14□□□□□ -0.31
CCS-206ENST00000530961 GPR160Q9UJ42 338 aa13.14□□□□□ -0.31
CCS-206ENST00000530961 ATRQ13535 2644 aa13.14□□□□□ -0.31
CCS-206ENST00000530961 IGLV3-9A0A075B6K5 115 aa13.13□□□□□ -0.31
CCS-206ENST00000530961 TMEM129A0AVI4 362 aa13.13□□□□□ -0.31
CCS-206ENST00000530961 H2BFMP0C1H6 154 aa13.13□□□□□ -0.31
CCS-206ENST00000530961 OR2T7P0C7T2 308 aa13.13□□□□□ -0.31
CCS-206ENST00000530961 HSD11B1P28845 292 aa13.13□□□□□ -0.31
CCS-206ENST00000530961 KLF3P57682 345 aaPredicted RBP13.13□□□□□ -0.31
CCS-206ENST00000530961 ERVS71-1P61550 626 aa13.13□□□□□ -0.31
CCS-206ENST00000530961 IL5RAQ01344 420 aa13.13□□□□□ -0.31
CCS-206ENST00000530961 ROM1Q03395 351 aa13.13□□□□□ -0.31
CCS-206ENST00000530961 MSMPQ1L6U9 139 aa13.13□□□□□ -0.31
CCS-206ENST00000530961 SLC35F2Q8IXU6 374 aa13.13□□□□□ -0.31
CCS-206ENST00000530961 OR51G2Q8NGK0 314 aa13.13□□□□□ -0.31
CCS-206ENST00000530961 OR2T27Q8NH04 317 aa13.13□□□□□ -0.31
CCS-206ENST00000530961 SLC25A40Q8TBP6 338 aa13.13□□□□□ -0.31
CCS-206ENST00000530961 KLF14Q8TD94 323 aaPredicted RBP13.13□□□□□ -0.31
CCS-206ENST00000530961 TFAP2CQ92754 450 aa13.13□□□□□ -0.31
CCS-206ENST00000530961 FOXC2Q99958 501 aa13.13□□□□□ -0.31
CCS-206ENST00000530961 MROQ9BYG7 248 aa13.13□□□□□ -0.31
CCS-206ENST00000530961 MRPL37Q9BZE1 423 aaKnown RBP13.13□□□□□ -0.31
CCS-206ENST00000530961 GSX2Q9BZM3 304 aa13.13□□□□□ -0.31
CCS-206ENST00000530961 OR2J1Q9GZK6 312 aa13.13□□□□□ -0.31
CCS-206ENST00000530961 DUSP13Q9UII6 198 aa13.13□□□□□ -0.31
CCS-206ENST00000530961 PCDHGB1Q9Y5G3 927 aa13.13□□□□□ -0.31
CCS-206ENST00000530961 ZNF670-ZNF695F2Z2N8 137 aa13.12□□□□□ -0.31
CCS-206ENST00000530961 H7C417 338 aa13.12□□□□□ -0.31
CCS-206ENST00000530961 ZNF254O75437 659 aa13.12□□□□□ -0.31
CCS-206ENST00000530961 IGHV3-13P01766 116 aa13.12□□□□□ -0.31
CCS-206ENST00000530961 LCATP04180 440 aa13.12□□□□□ -0.31
CCS-206ENST00000530961 DCTDP32321 178 aa13.12□□□□□ -0.31
CCS-206ENST00000530961 SLC6A9P48067 706 aa13.12□□□□□ -0.31
CCS-206ENST00000530961 HCCSP53701 268 aa13.12□□□□□ -0.31
CCS-206ENST00000530961 EGR3Q06889 387 aa13.12□□□□□ -0.31
CCS-206ENST00000530961 MAD2L1BPQ15013 274 aaPredicted RBP13.12□□□□□ -0.31
CCS-206ENST00000530961 SPATC1Q76KD6 591 aa13.12□□□□□ -0.31
CCS-206ENST00000530961 KRT77Q7Z794 578 aa13.12□□□□□ -0.31
CCS-206ENST00000530961 RNFT2Q96EX2 444 aa13.12□□□□□ -0.31
CCS-206ENST00000530961 AMELYQ99218 206 aa13.12□□□□□ -0.31
CCS-206ENST00000530961 SYT3Q9BQG1 590 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms