RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 PEX12O00623 359 aa7.3□□□□□ -1.24
CSDE1-214ENST00000530886 HSD17B6O14756 317 aa7.3□□□□□ -1.24
CSDE1-214ENST00000530886 NUDT21O43809 227 aaKnown RBP7.3□□□□□ -1.24
CSDE1-214ENST00000530886 B3GAT3O94766 335 aa7.3□□□□□ -1.24
CSDE1-214ENST00000530886 ERCC1P07992 297 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-214ENST00000530886 CCKARP32238 428 aa7.3□□□□□ -1.24
CSDE1-214ENST00000530886 PSMB10P40306 273 aa7.3□□□□□ -1.24
CSDE1-214ENST00000530886 ZNF136P52737 540 aa7.3□□□□□ -1.24
CSDE1-214ENST00000530886 TBPL1P62380 186 aa7.3□□□□□ -1.24
CSDE1-214ENST00000530886 SMAD4Q13485 552 aaKnown RBP7.3□□□□□ -1.24
CSDE1-214ENST00000530886 C2orf76Q3KRA6 126 aa7.3□□□□□ -1.24
CSDE1-214ENST00000530886 C10orf120Q5SQS8 335 aa7.3□□□□□ -1.24
CSDE1-214ENST00000530886 RPUSD3Q6P087 351 aaKnown RBP7.3□□□□□ -1.24
CSDE1-214ENST00000530886 GALNTL5Q7Z4T8 443 aa7.3□□□□□ -1.24
CSDE1-214ENST00000530886 SUMF2Q8NBJ7 301 aa7.3□□□□□ -1.24
CSDE1-214ENST00000530886 NOXO1Q8NFA2 376 aa7.3□□□□□ -1.24
CSDE1-214ENST00000530886 OR2AP1Q8NGE2 309 aa7.3□□□□□ -1.24
CSDE1-214ENST00000530886 OR56A1Q8NGH5 318 aa7.3□□□□□ -1.24
CSDE1-214ENST00000530886 OR1N1Q8NGS0 311 aa7.3□□□□□ -1.24
CSDE1-214ENST00000530886 FAM3DQ96BQ1 224 aa7.3□□□□□ -1.24
CSDE1-214ENST00000530886 C2orf50Q96LR7 162 aa7.3□□□□□ -1.24
CSDE1-214ENST00000530886 SLC26A1Q9H2B4 701 aa7.3□□□□□ -1.24
CSDE1-214ENST00000530886 ZCCHC3Q9NUD5 404 aaKnown RBP7.3□□□□□ -1.24
CSDE1-214ENST00000530886 KLK13Q9UKR3 277 aa7.3□□□□□ -1.24
CSDE1-214ENST00000530886 TMED7Q9Y3B3 224 aa7.3□□□□□ -1.24
CSDE1-214ENST00000530886 HSPB2A8KAH6 182 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 K7EPK0 472 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 K7ERQ8 282 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 FRS3O43559 492 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 PRICKLE3O43900 615 aaPredicted RBP7.29□□□□□ -1.24
CSDE1-214ENST00000530886 ELFN1P0C7U0 828 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 PAX5Q02548 391 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 TAF10Q12962 218 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 TRA2AQ13595 282 aaKnown RBP eCLIP7.29□□□□□ -1.24
CSDE1-214ENST00000530886 EBPQ15125 230 aaKnown RBP7.29□□□□□ -1.24
CSDE1-214ENST00000530886 HSPB2Q16082 182 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 SP5Q6BEB4 398 aaPredicted RBP7.29□□□□□ -1.24
CSDE1-214ENST00000530886 P4HA3Q7Z4N8 544 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 APOBEC3FQ8IUX4 373 aaKnown RBP7.29□□□□□ -1.24
CSDE1-214ENST00000530886 C1orf87Q8N0U7 546 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 FAM71E2Q8N5Q1 922 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 SLC35G3Q8N808 338 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 OR4S1Q8NGB4 309 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 OR51D1Q8NGF3 324 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 OR51A2Q8NGJ7 313 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 OR1P1Q8NH06 330 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 WFDC5Q8TCV5 224 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 TMEM239Q8WW34 195 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 MS4A6EQ96DS6 147 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 OSGIN2Q9Y236 505 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 TRAV8-7A0A075B6U6 113 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 NDUFS8O00217 210 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 LDLRAD4O15165 306 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 UPK3AO75631 287 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 NXPH2O95156 264 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 SOD2P04179 222 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 CHRM2P08172 466 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 TACSTD2P09758 323 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 TAGLN2P37802 199 aaKnown RBP7.29□□□□□ -1.24
CSDE1-214ENST00000530886 SELENOTP62341 195 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 TGM3Q08188 693 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 PRDX4Q13162 271 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 RAB11BQ15907 218 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 TMEM128Q5BJH2 165 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 ALG10BQ5I7T1 473 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 TPRG1Q6ZUI0 275 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 KCTD9Q7L273 389 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 MDGA2Q7Z553 956 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 NAXEQ8NCW5 288 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 DIRC2Q96SL1 478 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 INTS14Q96SY0 518 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 HIPK2Q9H2X6 1198 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 MSL2Q9HCI7 577 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 GPR173Q9NS66 373 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 CBLN4Q9NTU7 201 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 CHRNA9Q9UGM1 479 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 FOXD3Q9UJU5 478 aaPredicted RBP7.29□□□□□ -1.24
CSDE1-214ENST00000530886 NTNG1Q9Y2I2 539 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 FCF1Q9Y324 198 aaKnown RBP7.29□□□□□ -1.24
CSDE1-214ENST00000530886 C13orf42A0A1B0GVH6 325 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 DUXAA6NLW8 204 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 ZNF217O75362 1048 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 STK17BO94768 372 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 SFT2D2O95562 160 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 DIRAS3O95661 229 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 OPN1LWP04000 364 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 RPLP2P05387 115 aaKnown RBP7.29□□□□□ -1.24
CSDE1-214ENST00000530886 F3P13726 295 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 CD82P27701 267 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 SLC6A6P31641 620 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 ADAM8P78325 824 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 PSG6Q00889 435 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 AGERQ15109 404 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 ZNF343Q6P1L6 599 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 TEX38Q6PEX7 206 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 RSPO2Q6UXX9 243 aaPredicted RBP7.29□□□□□ -1.24
CSDE1-214ENST00000530886 TMCO2Q7Z6W1 182 aaPredicted RBP7.29□□□□□ -1.24
CSDE1-214ENST00000530886 HOGA1Q86XE5 327 aa7.29□□□□□ -1.24
CSDE1-214ENST00000530886 ADAD2Q8NCV1 583 aaKnown RBP7.29□□□□□ -1.24
CSDE1-214ENST00000530886 OR10G4Q8NGN3 311 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms