RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 LRCH1Q9Y2L9 728 aa17.58■□□□□ 0.4
SMPD1-204ENST00000530395 AUP1Q9Y679 476 aa17.58■□□□□ 0.4
SMPD1-204ENST00000530395 DCTN6O00399 190 aa17.57■□□□□ 0.4
SMPD1-204ENST00000530395 HSD17B1P14061 328 aa17.57■□□□□ 0.4
SMPD1-204ENST00000530395 SELEP16581 610 aa17.57■□□□□ 0.4
SMPD1-204ENST00000530395 ZNF12P17014 697 aa17.57■□□□□ 0.4
SMPD1-204ENST00000530395 CPT2P23786 658 aa17.57■□□□□ 0.4
SMPD1-204ENST00000530395 SEC61A1P61619 476 aaKnown RBP17.57■□□□□ 0.4
SMPD1-204ENST00000530395 CORO6Q6QEF8 472 aa17.57■□□□□ 0.4
SMPD1-204ENST00000530395 OR6V1Q8N148 313 aa17.57■□□□□ 0.4
SMPD1-204ENST00000530395 SLC26A10Q8NG04 563 aa17.57■□□□□ 0.4
SMPD1-204ENST00000530395 OR4K13Q8NH42 304 aa17.57■□□□□ 0.4
SMPD1-204ENST00000530395 NSMCE2Q96MF7 247 aa17.57■□□□□ 0.4
SMPD1-204ENST00000530395 CDADC1Q9BWV3 514 aa17.57■□□□□ 0.4
SMPD1-204ENST00000530395 RPRD1BQ9NQG5 326 aaKnown RBP17.57■□□□□ 0.4
SMPD1-204ENST00000530395 NUP50Q9UKX7 468 aa17.57■□□□□ 0.4
SMPD1-204ENST00000530395 INSIG2Q9Y5U4 225 aa17.57■□□□□ 0.4
SMPD1-204ENST00000530395 LRRC30A6NM36 301 aa17.56■□□□□ 0.4
SMPD1-204ENST00000530395 CEACAM18A8MTB9 384 aa17.56■□□□□ 0.4
SMPD1-204ENST00000530395 IQCF6A8MYZ5 107 aa17.56■□□□□ 0.4
SMPD1-204ENST00000530395 TRAPPC2LH3BP13 241 aa17.56■□□□□ 0.4
SMPD1-204ENST00000530395 SEMG1P04279 462 aa17.56■□□□□ 0.4
SMPD1-204ENST00000530395 FABP3P05413 133 aa17.56■□□□□ 0.4
SMPD1-204ENST00000530395 HIST1H1CP16403 213 aaKnown RBP17.56■□□□□ 0.4
SMPD1-204ENST00000530395 RBMXP38159 391 aaKnown RBP17.56■□□□□ 0.4
SMPD1-204ENST00000530395 ECH1Q13011 328 aa17.56■□□□□ 0.4
SMPD1-204ENST00000530395 SAMD4BQ5PRF9 694 aaKnown RBP17.56■□□□□ 0.4
SMPD1-204ENST00000530395 ZDHHC22Q8N966 263 aa17.56■□□□□ 0.4
SMPD1-204ENST00000530395 BHLHE23Q8NDY6 225 aa17.56■□□□□ 0.4
SMPD1-204ENST00000530395 OR2AJ1Q8NGZ0 328 aa17.56■□□□□ 0.4
SMPD1-204ENST00000530395 DVL3Q92997 716 aaPredicted RBP17.56■□□□□ 0.4
SMPD1-204ENST00000530395 PITX2Q99697 317 aa17.56■□□□□ 0.4
SMPD1-204ENST00000530395 SLC30A2Q9BRI3 323 aa17.56■□□□□ 0.4
SMPD1-204ENST00000530395 ESM1Q9NQ30 184 aa17.56■□□□□ 0.4
SMPD1-204ENST00000530395 DOCK11Q5JSL3 2073 aa17.56■□□□□ 0.4
SMPD1-204ENST00000530395 IDH3BO43837 385 aa17.55■□□□□ 0.4
SMPD1-204ENST00000530395 HLA-DQA2P01906 255 aa17.55■□□□□ 0.4
SMPD1-204ENST00000530395 RPS2P15880 293 aaKnown RBP17.55■□□□□ 0.4
SMPD1-204ENST00000530395 UBA52P62987 128 aaKnown RBP17.55■□□□□ 0.4
SMPD1-204ENST00000530395 MALLQ13021 153 aa17.55■□□□□ 0.4
SMPD1-204ENST00000530395 SLC18B1Q6NT16 456 aa17.55■□□□□ 0.4
SMPD1-204ENST00000530395 ZBTB46Q86UZ6 589 aa17.55■□□□□ 0.4
SMPD1-204ENST00000530395 LINC00346Q8IVM7 164 aa17.55■□□□□ 0.4
SMPD1-204ENST00000530395 C1orf87Q8N0U7 546 aa17.55■□□□□ 0.4
SMPD1-204ENST00000530395 ZNF420Q8TAQ5 688 aaPredicted RBP17.55■□□□□ 0.4
SMPD1-204ENST00000530395 ATF6BQ99941 703 aa17.55■□□□□ 0.4
SMPD1-204ENST00000530395 C1QTNF5Q9BXJ0 243 aa17.55■□□□□ 0.4
SMPD1-204ENST00000530395 PLA2G12AQ9BZM1 189 aa17.55■□□□□ 0.4
SMPD1-204ENST00000530395 TMEM100Q9NV29 134 aa17.55■□□□□ 0.4
SMPD1-204ENST00000530395 PPIAL4AQ9Y536 164 aa17.55■□□□□ 0.4
SMPD1-204ENST00000530395 F5H5K5 113 aa17.54■□□□□ 0.4
SMPD1-204ENST00000530395 ARPC2O15144 300 aa17.54■□□□□ 0.4
SMPD1-204ENST00000530395 MLNRO43193 412 aa17.54■□□□□ 0.4
SMPD1-204ENST00000530395 SNX3O60493 162 aa17.54■□□□□ 0.4
SMPD1-204ENST00000530395 CYB5R3P00387 301 aaPredicted RBP17.54■□□□□ 0.4
SMPD1-204ENST00000530395 RRM2P31350 389 aa17.54■□□□□ 0.4
SMPD1-204ENST00000530395 ZNF181Q2M3W8 571 aa17.54■□□□□ 0.4
SMPD1-204ENST00000530395 CFAP77Q6ZQR2 320 aa17.54■□□□□ 0.4
SMPD1-204ENST00000530395 COLCA1Q6ZS62 124 aa17.54■□□□□ 0.4
SMPD1-204ENST00000530395 CPLX4Q7Z7G2 160 aa17.54■□□□□ 0.4
SMPD1-204ENST00000530395 MOGAT3Q86VF5 341 aa17.54■□□□□ 0.4
SMPD1-204ENST00000530395 PGAM4Q8N0Y7 254 aa17.54■□□□□ 0.4
SMPD1-204ENST00000530395 SIGLECL1Q8N7X8 197 aa17.54■□□□□ 0.4
SMPD1-204ENST00000530395 SDR9C7Q8NEX9 313 aa17.54■□□□□ 0.4
SMPD1-204ENST00000530395 GNPDA2Q8TDQ7 276 aa17.54■□□□□ 0.4
SMPD1-204ENST00000530395 SSBP3Q9BWW4 388 aaPredicted RBP17.54■□□□□ 0.4
SMPD1-204ENST00000530395 WDR76Q9H967 626 aa17.54■□□□□ 0.4
SMPD1-204ENST00000530395 MIOXQ9UGB7 285 aa17.54■□□□□ 0.4
SMPD1-204ENST00000530395 F5H5P2 479 aa17.53■□□□□ 0.4
SMPD1-204ENST00000530395 H0YL77 283 aa17.53■□□□□ 0.4
SMPD1-204ENST00000530395 WNT2P09544 360 aa17.53■□□□□ 0.4
SMPD1-204ENST00000530395 ACSM4P0C7M7 580 aa17.53■□□□□ 0.4
SMPD1-204ENST00000530395 IRF2P14316 349 aa17.53■□□□□ 0.4
SMPD1-204ENST00000530395 GSSP48637 474 aa17.53■□□□□ 0.4
SMPD1-204ENST00000530395 TRAP1Q12931 704 aaKnown RBP17.53■□□□□ 0.4
SMPD1-204ENST00000530395 TSPAN31Q12999 210 aa17.53■□□□□ 0.4
SMPD1-204ENST00000530395 KRTAP27-1Q3LI81 207 aa17.53■□□□□ 0.4
SMPD1-204ENST00000530395 BTNL3Q6UXE8 466 aa17.53■□□□□ 0.4
SMPD1-204ENST00000530395 ZNF620Q6ZNG0 422 aa17.53■□□□□ 0.4
SMPD1-204ENST00000530395 DOK3Q7L591 496 aa17.53■□□□□ 0.4
SMPD1-204ENST00000530395 OR52L1Q8NGH7 329 aa17.53■□□□□ 0.4
SMPD1-204ENST00000530395 PLEKHA8Q96JA3 519 aa17.53■□□□□ 0.4
SMPD1-204ENST00000530395 FN3KQ9H479 309 aa17.53■□□□□ 0.4
SMPD1-204ENST00000530395 ZMAT3Q9HA38 289 aaKnown RBP17.53■□□□□ 0.4
SMPD1-204ENST00000530395 CYB5R1Q9UHQ9 305 aa17.53■□□□□ 0.4
SMPD1-204ENST00000530395 KCNG2Q9UJ96 466 aa17.53■□□□□ 0.4
SMPD1-204ENST00000530395 OR6C68A6NDL8 312 aa17.52■□□□□ 0.4
SMPD1-204ENST00000530395 LCATP04180 440 aa17.52■□□□□ 0.4
SMPD1-204ENST00000530395 ZNF823P16415 610 aa17.52■□□□□ 0.4
SMPD1-204ENST00000530395 MSX2P35548 267 aaPredicted RBP17.52■□□□□ 0.4
SMPD1-204ENST00000530395 TPTEP56180 551 aa17.52■□□□□ 0.4
SMPD1-204ENST00000530395 GNB2P62879 340 aa17.52■□□□□ 0.4
SMPD1-204ENST00000530395 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.52■□□□□ 0.4
SMPD1-204ENST00000530395 GK2Q14410 553 aaPredicted RBP17.52■□□□□ 0.4
SMPD1-204ENST00000530395 RSPO1Q2MKA7 263 aaPredicted RBP17.52■□□□□ 0.4
SMPD1-204ENST00000530395 RPL13AP3Q6NVV1 102 aa17.52■□□□□ 0.4
SMPD1-204ENST00000530395 NLRC3Q7RTR2 1065 aa17.52■□□□□ 0.4
SMPD1-204ENST00000530395 KLBQ86Z14 1044 aa17.52■□□□□ 0.4
SMPD1-204ENST00000530395 OR52E2Q8NGJ4 325 aa17.52■□□□□ 0.4
SMPD1-204ENST00000530395 NEIL1Q96FI4 390 aaPredicted RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms