RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 HPCAP84074 193 aa4.34□□□□□ -1.71
AMBRA1-209ENST00000529963 ARHGAP11BQ3KRB8 267 aa4.34□□□□□ -1.71
AMBRA1-209ENST00000529963 KRTAP24-1Q3LI83 254 aa4.34□□□□□ -1.71
AMBRA1-209ENST00000529963 XKR7Q5GH72 579 aa4.34□□□□□ -1.71
AMBRA1-209ENST00000529963 ATAD3BQ5T9A4 648 aa4.34□□□□□ -1.71
AMBRA1-209ENST00000529963 IL23RQ5VWK5 629 aa4.34□□□□□ -1.71
AMBRA1-209ENST00000529963 FAM166AQ6J272 317 aa4.34□□□□□ -1.71
AMBRA1-209ENST00000529963 CASP12Q6UXS9 341 aa4.34□□□□□ -1.71
AMBRA1-209ENST00000529963 B3GLCTQ6Y288 498 aa4.34□□□□□ -1.71
AMBRA1-209ENST00000529963 C9orf139Q6ZV77 190 aa4.34□□□□□ -1.71
AMBRA1-209ENST00000529963 KCTD8Q6ZWB6 473 aa4.34□□□□□ -1.71
AMBRA1-209ENST00000529963 GRINAQ7Z429 371 aa4.34□□□□□ -1.71
AMBRA1-209ENST00000529963 C6orf120Q7Z4R8 191 aa4.34□□□□□ -1.71
AMBRA1-209ENST00000529963 C4orf33Q8N1A6 199 aa4.34□□□□□ -1.71
AMBRA1-209ENST00000529963 KRTCAP2Q8N6L1 136 aa4.34□□□□□ -1.71
AMBRA1-209ENST00000529963 AGR3Q8TD06 166 aa4.34□□□□□ -1.71
AMBRA1-209ENST00000529963 TMEM255BQ8WV15 326 aa4.34□□□□□ -1.71
AMBRA1-209ENST00000529963 UBLCP1Q8WVY7 318 aaPredicted RBP4.34□□□□□ -1.71
AMBRA1-209ENST00000529963 ZNF524Q96C55 264 aa4.34□□□□□ -1.71
AMBRA1-209ENST00000529963 C1orf50Q9BV19 199 aa4.34□□□□□ -1.71
AMBRA1-209ENST00000529963 C1QTNF6Q9BXI9 259 aa4.34□□□□□ -1.71
AMBRA1-209ENST00000529963 ZNF350Q9GZX5 532 aa4.34□□□□□ -1.71
AMBRA1-209ENST00000529963 FN3KQ9H479 309 aa4.34□□□□□ -1.71
AMBRA1-209ENST00000529963 SLC17A5Q9NRA2 495 aa4.34□□□□□ -1.71
AMBRA1-209ENST00000529963 CTPS2Q9NRF8 586 aa4.34□□□□□ -1.71
AMBRA1-209ENST00000529963 POLE3Q9NRF9 147 aa4.34□□□□□ -1.71
AMBRA1-209ENST00000529963 RCC2Q9P258 522 aaKnown RBP4.34□□□□□ -1.71
AMBRA1-209ENST00000529963 SLC9A8Q9Y2E8 581 aa4.34□□□□□ -1.71
AMBRA1-209ENST00000529963 WDR45Q9Y484 360 aa4.34□□□□□ -1.71
AMBRA1-209ENST00000529963 C5orf52A6NGY3 159 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 XRCC3O43542 346 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 KIAA0513O60268 411 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 FCMRO60667 390 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 UGT2B17O75795 530 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 SHBGP04278 402 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 GUSBP08236 651 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 OR2T7P0C7T2 308 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 IGFBP5P24593 272 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 ALDH3A1P30838 453 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 WNT5AP41221 380 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 PRPS1P60891 318 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 SLC35A1P78382 337 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 ARL16Q0P5N6 197 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 NPRL3Q12980 569 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 GGTLC2Q14390 218 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 SQLEQ14534 574 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 GABRA6Q16445 453 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 CARTPTQ16568 116 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 UGT3A2Q3SY77 523 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 IQCCQ4KMZ1 466 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 C9orf135Q5VTT2 229 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 LIPNQ5VXI9 398 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 KRTAP5-3Q6L8H2 238 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 EMBQ6PCB8 327 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 ABHD12BQ7Z5M8 362 aaPredicted RBP4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 RIMKLAQ8IXN7 391 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 MUC20Q8N307 709 aaPredicted RBP4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 ARFGAP2Q8N6H7 521 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 WDR31Q8NA23 367 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 ZNF540Q8NDQ6 660 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 FAM71CQ8NEG0 241 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 OR52E4Q8NGH9 312 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 OR4A15Q8NGL6 344 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 MIPOL1Q8TD10 442 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 TUBGCP3Q96CW5 907 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 DDIT4LQ96D03 193 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 FBXO17Q96EF6 278 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 ARL5BQ96KC2 179 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 ZNF583Q96ND8 569 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 FEVQ99581 238 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 KCNS3Q9BQ31 491 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 RHOXF2Q9BQY4 288 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 NEURL2Q9BR09 285 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 OR51I1Q9H343 314 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 MYOZ1Q9NP98 299 aaPredicted RBP4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 EXOSC3Q9NQT5 275 aaKnown RBP4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 PTTG2Q9NZH5 202 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 TMEM181Q9P2C4 612 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 TRAPPC4Q9Y296 219 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 DYSFO75923 2080 aa4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 NUP214P35658 2090 aaPredicted RBP4.33□□□□□ -1.72
AMBRA1-209ENST00000529963 MEGF8Q7Z7M0 2845 aa4.32□□□□□ -1.72
AMBRA1-209ENST00000529963 SVEP1Q4LDE5 3571 aa4.32□□□□□ -1.72
AMBRA1-209ENST00000529963 A0A1W2PPQ1 181 aa4.32□□□□□ -1.72
AMBRA1-209ENST00000529963 LOC390937A0A1W2PQ73 354 aa4.32□□□□□ -1.72
AMBRA1-209ENST00000529963 ATP6V1G2-DDX39BF2Z307 99 aa4.32□□□□□ -1.72
AMBRA1-209ENST00000529963 PDLIM1O00151 329 aa4.32□□□□□ -1.72
AMBRA1-209ENST00000529963 ZNF208O43345 1280 aa4.32□□□□□ -1.72
AMBRA1-209ENST00000529963 KRT33AO76009 404 aa4.32□□□□□ -1.72
AMBRA1-209ENST00000529963 LY6HO94772 140 aa4.32□□□□□ -1.72
AMBRA1-209ENST00000529963 ERCC1P07992 297 aaPredicted RBP4.32□□□□□ -1.72
AMBRA1-209ENST00000529963 OR12D1P0DN82 309 aa4.32□□□□□ -1.72
AMBRA1-209ENST00000529963 UQCRBP14927 111 aa4.32□□□□□ -1.72
AMBRA1-209ENST00000529963 CCNA2P20248 432 aa4.32□□□□□ -1.72
AMBRA1-209ENST00000529963 UQCRC2P22695 453 aa4.32□□□□□ -1.72
AMBRA1-209ENST00000529963 PAX7P23759 505 aa4.32□□□□□ -1.72
AMBRA1-209ENST00000529963 IDH2P48735 452 aaKnown RBP4.32□□□□□ -1.72
AMBRA1-209ENST00000529963 SLC9A3P48764 834 aa4.32□□□□□ -1.72
AMBRA1-209ENST00000529963 POLR2HP52434 150 aaKnown RBP4.32□□□□□ -1.72
AMBRA1-209ENST00000529963 CLDN8P56748 225 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms