RNA–Protein interactions for RNA: ENST00000529506.5

CMTM1-213, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-213ENST00000529506 SEMA6DQ8NFY4 1073 aa14.96□□□□□ -0.01
CMTM1-213ENST00000529506 SLC26A10Q8NG04 563 aa14.96□□□□□ -0.01
CMTM1-213ENST00000529506 FAM216AQ8WUB2 273 aa14.96□□□□□ -0.01
CMTM1-213ENST00000529506 NTN4Q9HB63 628 aa14.96□□□□□ -0.01
CMTM1-213ENST00000529506 GCM1Q9NP62 436 aa14.96□□□□□ -0.01
CMTM1-213ENST00000529506 NOP16Q9Y3C1 178 aaKnown RBP14.96□□□□□ -0.01
CMTM1-213ENST00000529506 IQCF6A8MYZ5 107 aa14.95□□□□□ -0.02
CMTM1-213ENST00000529506 TMEM178BH3BS89 294 aa14.95□□□□□ -0.02
CMTM1-213ENST00000529506 DCTN6O00399 190 aa14.95□□□□□ -0.02
CMTM1-213ENST00000529506 MSX2P35548 267 aaPredicted RBP14.95□□□□□ -0.02
CMTM1-213ENST00000529506 SLC6A9P48067 706 aa14.95□□□□□ -0.02
CMTM1-213ENST00000529506 TPTEP56180 551 aa14.95□□□□□ -0.02
CMTM1-213ENST00000529506 GNGT1P63211 74 aa14.95□□□□□ -0.02
CMTM1-213ENST00000529506 HLXQ14774 488 aaPredicted RBP14.95□□□□□ -0.02
CMTM1-213ENST00000529506 MEP1BQ16820 701 aa14.95□□□□□ -0.02
CMTM1-213ENST00000529506 ESCO2Q56NI9 601 aa14.95□□□□□ -0.02
CMTM1-213ENST00000529506 OTPQ5XKR4 325 aa14.95□□□□□ -0.02
CMTM1-213ENST00000529506 CORO6Q6QEF8 472 aa14.95□□□□□ -0.02
CMTM1-213ENST00000529506 RBMS3Q6XE24 437 aaKnown RBP14.95□□□□□ -0.02
CMTM1-213ENST00000529506 COLCA1Q6ZS62 124 aa14.95□□□□□ -0.02
CMTM1-213ENST00000529506 PIGWQ7Z7B1 504 aa14.95□□□□□ -0.02
CMTM1-213ENST00000529506 DEFB107AQ8IZN7 70 aa14.95□□□□□ -0.02
CMTM1-213ENST00000529506 OR5AS1Q8N127 324 aa14.95□□□□□ -0.02
CMTM1-213ENST00000529506 ARHGAP24Q8N264 748 aa14.95□□□□□ -0.02
CMTM1-213ENST00000529506 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.95□□□□□ -0.02
CMTM1-213ENST00000529506 OR52E2Q8NGJ4 325 aa14.95□□□□□ -0.02
CMTM1-213ENST00000529506 ERGIC1Q969X5 290 aa14.95□□□□□ -0.02
CMTM1-213ENST00000529506 ATF6BQ99941 703 aa14.95□□□□□ -0.02
CMTM1-213ENST00000529506 SLC30A2Q9BRI3 323 aa14.95□□□□□ -0.02
CMTM1-213ENST00000529506 C1QTNF5Q9BXJ0 243 aa14.95□□□□□ -0.02
CMTM1-213ENST00000529506 TRIM15Q9C019 465 aa14.95□□□□□ -0.02
CMTM1-213ENST00000529506 CYB5R1Q9UHQ9 305 aa14.95□□□□□ -0.02
CMTM1-213ENST00000529506 DOCK11Q5JSL3 2073 aa14.95□□□□□ -0.02
CMTM1-213ENST00000529506 F5H5K5 113 aa14.94□□□□□ -0.02
CMTM1-213ENST00000529506 FSTL3O95633 263 aa14.94□□□□□ -0.02
CMTM1-213ENST00000529506 ADRA2CP18825 462 aa14.94□□□□□ -0.02
CMTM1-213ENST00000529506 ACTG1P63261 375 aa14.94□□□□□ -0.02
CMTM1-213ENST00000529506 ZNF181Q2M3W8 571 aa14.94□□□□□ -0.02
CMTM1-213ENST00000529506 SLC18B1Q6NT16 456 aa14.94□□□□□ -0.02
CMTM1-213ENST00000529506 ZNF771Q7L3S4 317 aaPredicted RBP14.94□□□□□ -0.02
CMTM1-213ENST00000529506 CELF2-AS1Q8N7Q2 184 aa14.94□□□□□ -0.02
CMTM1-213ENST00000529506 OR2T4Q8NH00 348 aa14.94□□□□□ -0.02
CMTM1-213ENST00000529506 GCDHQ92947 438 aaPredicted RBP14.94□□□□□ -0.02
CMTM1-213ENST00000529506 SPTSSAQ969W0 71 aa14.94□□□□□ -0.02
CMTM1-213ENST00000529506 PLEKHA8Q96JA3 519 aa14.94□□□□□ -0.02
CMTM1-213ENST00000529506 MEGF10Q96KG7 1140 aa14.94□□□□□ -0.02
CMTM1-213ENST00000529506 MRI1Q9BV20 369 aa14.94□□□□□ -0.02
CMTM1-213ENST00000529506 SLC22A4Q9H015 551 aa14.94□□□□□ -0.02
CMTM1-213ENST00000529506 ARL8BQ9NVJ2 186 aa14.94□□□□□ -0.02
CMTM1-213ENST00000529506 ACTR3BQ9P1U1 418 aa14.94□□□□□ -0.02
CMTM1-213ENST00000529506 MIOXQ9UGB7 285 aa14.94□□□□□ -0.02
CMTM1-213ENST00000529506 LRCH1Q9Y2L9 728 aa14.94□□□□□ -0.02
CMTM1-213ENST00000529506 AUP1Q9Y679 476 aa14.94□□□□□ -0.02
CMTM1-213ENST00000529506 OR6C68A6NDL8 312 aa14.93□□□□□ -0.02
CMTM1-213ENST00000529506 A8MXK9 166 aa14.93□□□□□ -0.02
CMTM1-213ENST00000529506 TNFRSF11BO00300 401 aa14.93□□□□□ -0.02
CMTM1-213ENST00000529506 GPANK1O95872 356 aa14.93□□□□□ -0.02
CMTM1-213ENST00000529506 LCATP04180 440 aa14.93□□□□□ -0.02
CMTM1-213ENST00000529506 ACSM4P0C7M7 580 aa14.93□□□□□ -0.02
CMTM1-213ENST00000529506 IRF2P14316 349 aa14.93□□□□□ -0.02
CMTM1-213ENST00000529506 ZFP36P26651 326 aaKnown RBP14.93□□□□□ -0.02
CMTM1-213ENST00000529506 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.93□□□□□ -0.02
CMTM1-213ENST00000529506 ZMYND11Q15326 602 aa14.93□□□□□ -0.02
CMTM1-213ENST00000529506 RSPO1Q2MKA7 263 aaPredicted RBP14.93□□□□□ -0.02
CMTM1-213ENST00000529506 SLC35F1Q5T1Q4 408 aa14.93□□□□□ -0.02
CMTM1-213ENST00000529506 PGBD2Q6P3X8 592 aa14.93□□□□□ -0.02
CMTM1-213ENST00000529506 ZNF620Q6ZNG0 422 aa14.93□□□□□ -0.02
CMTM1-213ENST00000529506 SDR9C7Q8NEX9 313 aa14.93□□□□□ -0.02
CMTM1-213ENST00000529506 OR4C15Q8NGM1 316 aa14.93□□□□□ -0.02
CMTM1-213ENST00000529506 SIGLEC11Q96RL6 698 aa14.93□□□□□ -0.02
CMTM1-213ENST00000529506 MUC13Q9H3R2 512 aa14.93□□□□□ -0.02
CMTM1-213ENST00000529506 DDX28Q9NUL7 540 aaKnown RBP14.93□□□□□ -0.02
CMTM1-213ENST00000529506 DCAF16Q9NXF7 216 aa14.93□□□□□ -0.02
CMTM1-213ENST00000529506 IL20Q9NYY1 176 aa14.93□□□□□ -0.02
CMTM1-213ENST00000529506 OR5V1Q9UGF6 321 aa14.93□□□□□ -0.02
CMTM1-213ENST00000529506 OPN4Q9UHM6 478 aa14.93□□□□□ -0.02
CMTM1-213ENST00000529506 CDH10Q9Y6N8 788 aa14.93□□□□□ -0.02
CMTM1-213ENST00000529506 WNT2P09544 360 aa14.92□□□□□ -0.02
CMTM1-213ENST00000529506 GGT2P36268 569 aa14.92□□□□□ -0.02
CMTM1-213ENST00000529506 ERFP50548 548 aa14.92□□□□□ -0.02
CMTM1-213ENST00000529506 RAD23AP54725 363 aa14.92□□□□□ -0.02
CMTM1-213ENST00000529506 TRAP1Q12931 704 aaKnown RBP14.92□□□□□ -0.02
CMTM1-213ENST00000529506 ZNF154Q13106 437 aa14.92□□□□□ -0.02
CMTM1-213ENST00000529506 KRTAP27-1Q3LI81 207 aa14.92□□□□□ -0.02
CMTM1-213ENST00000529506 ARMCX4Q5H9R4 360 aa14.92□□□□□ -0.02
CMTM1-213ENST00000529506 PGAP1Q75T13 922 aa14.92□□□□□ -0.02
CMTM1-213ENST00000529506 LINC00346Q8IVM7 164 aa14.92□□□□□ -0.02
CMTM1-213ENST00000529506 SPRYD4Q8WW59 207 aaPredicted RBP14.92□□□□□ -0.02
CMTM1-213ENST00000529506 TMEM165Q9HC07 324 aa14.92□□□□□ -0.02
CMTM1-213ENST00000529506 NUP50Q9UKX7 468 aa14.92□□□□□ -0.02
CMTM1-213ENST00000529506 BAIAP2Q9UQB8 552 aa14.92□□□□□ -0.02
CMTM1-213ENST00000529506 INSIG2Q9Y5U4 225 aa14.92□□□□□ -0.02
CMTM1-213ENST00000529506 LYVE1Q9Y5Y7 322 aa14.92□□□□□ -0.02
CMTM1-213ENST00000529506 NBEAL1Q6ZS30 2694 aa14.91□□□□□ -0.02
CMTM1-213ENST00000529506 B2RBV5 119 aa14.91□□□□□ -0.02
CMTM1-213ENST00000529506 F5H0A9 414 aaPredicted RBP14.91□□□□□ -0.02
CMTM1-213ENST00000529506 CCNB2O95067 398 aa14.91□□□□□ -0.02
CMTM1-213ENST00000529506 ZNF12P17014 697 aa14.91□□□□□ -0.02
CMTM1-213ENST00000529506 COMPP49747 757 aaPredicted RBP14.91□□□□□ -0.02
CMTM1-213ENST00000529506 MMP16P51512 607 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms