RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 SOX7Q9BT81 388 aa10.29□□□□□ -0.76
TRAPPC4-209ENST00000528230 C1QTNF5Q9BXJ0 243 aa10.29□□□□□ -0.76
TRAPPC4-209ENST00000528230 POFUT1Q9H488 388 aa10.29□□□□□ -0.76
TRAPPC4-209ENST00000528230 ZNF556Q9HAH1 456 aa10.29□□□□□ -0.76
TRAPPC4-209ENST00000528230 PNRC2Q9NPJ4 139 aaKnown RBP10.29□□□□□ -0.76
TRAPPC4-209ENST00000528230 B4DSR2 109 aa10.28□□□□□ -0.76
TRAPPC4-209ENST00000528230 H3BN98 237 aa10.28□□□□□ -0.76
TRAPPC4-209ENST00000528230 HMGN1P05114 100 aa10.28□□□□□ -0.76
TRAPPC4-209ENST00000528230 ACSM4P0C7M7 580 aa10.28□□□□□ -0.76
TRAPPC4-209ENST00000528230 OSMP13725 252 aa10.28□□□□□ -0.76
TRAPPC4-209ENST00000528230 SPI1P17947 270 aa10.28□□□□□ -0.76
TRAPPC4-209ENST00000528230 TNFRSF1AP19438 455 aa10.28□□□□□ -0.76
TRAPPC4-209ENST00000528230 TNFSF4P23510 183 aa10.28□□□□□ -0.76
TRAPPC4-209ENST00000528230 IL2RGP31785 369 aa10.28□□□□□ -0.76
TRAPPC4-209ENST00000528230 TPTEP56180 551 aa10.28□□□□□ -0.76
TRAPPC4-209ENST00000528230 TNFAIP6P98066 277 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC4-209ENST00000528230 DBPQ10586 325 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC4-209ENST00000528230 SLC27A4Q6P1M0 643 aa10.28□□□□□ -0.76
TRAPPC4-209ENST00000528230 OR9Q1Q8NGQ5 310 aa10.28□□□□□ -0.76
TRAPPC4-209ENST00000528230 CLDND2Q8NHS1 167 aa10.28□□□□□ -0.76
TRAPPC4-209ENST00000528230 DNAJC9Q8WXX5 260 aa10.28□□□□□ -0.76
TRAPPC4-209ENST00000528230 RAB1CQ92928 201 aa10.28□□□□□ -0.76
TRAPPC4-209ENST00000528230 SPTSSAQ969W0 71 aa10.28□□□□□ -0.76
TRAPPC4-209ENST00000528230 SLCO4A1Q96BD0 722 aa10.28□□□□□ -0.76
TRAPPC4-209ENST00000528230 MAP6Q96JE9 813 aa10.28□□□□□ -0.76
TRAPPC4-209ENST00000528230 BEX2Q9BXY8 128 aa10.28□□□□□ -0.76
TRAPPC4-209ENST00000528230 SHARPINQ9H0F6 387 aa10.28□□□□□ -0.76
TRAPPC4-209ENST00000528230 MSL2Q9HCI7 577 aa10.28□□□□□ -0.76
TRAPPC4-209ENST00000528230 DDX28Q9NUL7 540 aaKnown RBP10.28□□□□□ -0.76
TRAPPC4-209ENST00000528230 TVP23AA6NH52 213 aa10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 CLDN25C9JDP6 229 aa10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 F5H5K5 113 aa10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 ZNF593O00488 134 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 SURF4O15260 269 aa10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 DEAF1O75398 565 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 IFNA2P01563 188 aa10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 FAM157CP0CG43 387 aa10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 SELEP16581 610 aa10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 OTX1P32242 354 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 ENTPD1P49961 510 aa10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 DVL1P1P54792 670 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 LMO4P61968 165 aa10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 CDK5Q00535 292 aa10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 GINS1Q14691 196 aa10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 LINC01590Q5TEZ4 76 aa10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 SHQ1Q6PI26 577 aaKnown RBP10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 Q6ZR03 302 aa10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 ZNF511Q8NB15 262 aa10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 OR8G5Q8NG78 346 aa10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 OR51L1Q8NGJ5 315 aa10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 OR13G1Q8NGZ3 307 aa10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 UTP4Q969X6 686 aaKnown RBP10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 TIMD4Q96H15 378 aa10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 ZNF582Q96NG8 517 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 HCAR1Q9BXC0 346 aa10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 WDR76Q9H967 626 aa10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 NTN4Q9HB63 628 aa10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 PTTG3PQ9NZH4 202 aa10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 IL19Q9UHD0 177 aa10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 COMMD3-BMI1R4GMX3 469 aa10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 ABCA2Q9BZC7 2435 aa10.27□□□□□ -0.77
TRAPPC4-209ENST00000528230 IQCF6A8MYZ5 107 aa10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 M0R135 149 aa10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 WNT9BO14905 357 aa10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 LCATP04180 440 aa10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 GYPBP06028 91 aa10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 ANPEPP15144 967 aa10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 HNF1AP20823 631 aa10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 PCMT1P22061 227 aa10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 PAICSP22234 425 aaKnown RBP10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 PRKACGP22612 351 aa10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 IGFBP5P24593 272 aa10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 POU1F1P28069 291 aa10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 THBS2P35442 1172 aa10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 MALLQ13021 153 aa10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 HLXQ14774 488 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 FAM120AOSQ5T036 256 aa10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 ACSM5Q6NUN0 579 aa10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 DRAM2Q6UX65 266 aa10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 RHOUQ7L0Q8 258 aa10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 DCXRQ7Z4W1 244 aa10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 PEG10Q86TG7 708 aaKnown RBP10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 NAA40Q86UY6 237 aa10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 ATG16L2Q8NAA4 619 aa10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 OR2Z1Q8NG97 314 aa10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 OR10S1Q8NGN2 331 aa10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 CCL17Q92583 94 aa10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 DUS3LQ96G46 650 aaKnown RBP10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 ZNF799Q96GE5 643 aa10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 TEX12Q9BXU0 123 aa10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 MARCH7Q9H992 704 aa10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 WIPI2Q9Y4P8 454 aa10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 CACNG2Q9Y698 323 aa10.26□□□□□ -0.77
TRAPPC4-209ENST00000528230 A0A1B0GWJ7 208 aa10.25□□□□□ -0.77
TRAPPC4-209ENST00000528230 IFNL4K9M1U5 179 aa10.25□□□□□ -0.77
TRAPPC4-209ENST00000528230 TIPRLO75663 272 aa10.25□□□□□ -0.77
TRAPPC4-209ENST00000528230 GLCEO94923 617 aa10.25□□□□□ -0.77
TRAPPC4-209ENST00000528230 SPARCP09486 303 aa10.25□□□□□ -0.77
TRAPPC4-209ENST00000528230 CLUP10909 449 aa10.25□□□□□ -0.77
TRAPPC4-209ENST00000528230 RPS27P42677 84 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms