RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 PTCHD4Q6ZW05 846 aa19.63■□□□□ 0.73
CPSF1-202ENST00000527827 NLRC3Q7RTR2 1065 aa19.63■□□□□ 0.73
CPSF1-202ENST00000527827 C1orf87Q8N0U7 546 aa19.63■□□□□ 0.73
CPSF1-202ENST00000527827 NUAK2Q9H093 628 aa19.63■□□□□ 0.73
CPSF1-202ENST00000527827 WDR76Q9H967 626 aa19.63■□□□□ 0.73
CPSF1-202ENST00000527827 NRIP3Q9NQ35 241 aa19.63■□□□□ 0.73
CPSF1-202ENST00000527827 CLN8Q9UBY8 286 aa19.63■□□□□ 0.73
CPSF1-202ENST00000527827 SIGLEC7Q9Y286 467 aa19.63■□□□□ 0.73
CPSF1-202ENST00000527827 LHFPL6Q9Y693 200 aa19.63■□□□□ 0.73
CPSF1-202ENST00000527827 PRKDCP78527 4128 aaKnown RBP19.62■□□□□ 0.73
CPSF1-202ENST00000527827 A0A1B0GUS0 222 aa19.62■□□□□ 0.73
CPSF1-202ENST00000527827 C22orf46C9J442 243 aa19.62■□□□□ 0.73
CPSF1-202ENST00000527827 NDUFB2O95178 105 aa19.62■□□□□ 0.73
CPSF1-202ENST00000527827 HLA-DPB1P04440 258 aa19.62■□□□□ 0.73
CPSF1-202ENST00000527827 GATA4P43694 442 aa19.62■□□□□ 0.73
CPSF1-202ENST00000527827 MAB21L1Q13394 359 aa19.62■□□□□ 0.73
CPSF1-202ENST00000527827 MAPRE2Q15555 327 aa19.62■□□□□ 0.73
CPSF1-202ENST00000527827 IFI44LQ53G44 452 aa19.62■□□□□ 0.73
CPSF1-202ENST00000527827 ZNF362Q5T0B9 420 aaPredicted RBP19.62■□□□□ 0.73
CPSF1-202ENST00000527827 GPR139Q6DWJ6 353 aa19.62■□□□□ 0.73
CPSF1-202ENST00000527827 TSEN54Q7Z6J9 526 aaKnown RBP19.62■□□□□ 0.73
CPSF1-202ENST00000527827 FAM46AQ96IP4 442 aaKnown RBP19.62■□□□□ 0.73
CPSF1-202ENST00000527827 GPX7Q96SL4 187 aaPredicted RBP19.62■□□□□ 0.73
CPSF1-202ENST00000527827 COQ7Q99807 217 aa19.62■□□□□ 0.73
CPSF1-202ENST00000527827 MARCH7Q9H992 704 aa19.62■□□□□ 0.73
CPSF1-202ENST00000527827 BEX1Q9HBH7 125 aa19.62■□□□□ 0.73
CPSF1-202ENST00000527827 TNFRSF19Q9NS68 423 aa19.62■□□□□ 0.73
CPSF1-202ENST00000527827 MRGBPQ9NV56 204 aa19.62■□□□□ 0.73
CPSF1-202ENST00000527827 C1RLQ9NZP8 487 aa19.62■□□□□ 0.73
CPSF1-202ENST00000527827 SOCS2O14508 198 aa19.61■□□□□ 0.73
CPSF1-202ENST00000527827 PHYHO14832 338 aa19.61■□□□□ 0.73
CPSF1-202ENST00000527827 ZNF682O95780 498 aa19.61■□□□□ 0.73
CPSF1-202ENST00000527827 RAG2P55895 527 aa19.61■□□□□ 0.73
CPSF1-202ENST00000527827 PRSS12P56730 875 aa19.61■□□□□ 0.73
CPSF1-202ENST00000527827 FXYD6P3P58550 94 aa19.61■□□□□ 0.73
CPSF1-202ENST00000527827 MEP1BQ16820 701 aa19.61■□□□□ 0.73
CPSF1-202ENST00000527827 RUSC1-AS1Q66K80 236 aa19.61■□□□□ 0.73
CPSF1-202ENST00000527827 FIP1L1Q6UN15 594 aaKnown RBP19.61■□□□□ 0.73
CPSF1-202ENST00000527827 Q6YL49 198 aa19.61■□□□□ 0.73
CPSF1-202ENST00000527827 DCDC5Q6ZRR9 648 aa19.61■□□□□ 0.73
CPSF1-202ENST00000527827 COLCA1Q6ZS62 124 aa19.61■□□□□ 0.73
CPSF1-202ENST00000527827 CBLL1Q75N03 491 aa19.61■□□□□ 0.73
CPSF1-202ENST00000527827 GJC3Q8NFK1 279 aa19.61■□□□□ 0.73
CPSF1-202ENST00000527827 OR4F5Q8NH21 305 aa19.61■□□□□ 0.73
CPSF1-202ENST00000527827 SLC7A13Q8TCU3 470 aa19.61■□□□□ 0.73
CPSF1-202ENST00000527827 CHIAQ9BZP6 476 aa19.61■□□□□ 0.73
CPSF1-202ENST00000527827 NDEL1Q9GZM8 345 aa19.61■□□□□ 0.73
CPSF1-202ENST00000527827 HDHD2Q9H0R4 259 aa19.61■□□□□ 0.73
CPSF1-202ENST00000527827 NOX4Q9NPH5 578 aa19.61■□□□□ 0.73
CPSF1-202ENST00000527827 TMEM100Q9NV29 134 aa19.61■□□□□ 0.73
CPSF1-202ENST00000527827 TMEM5Q9Y2B1 443 aa19.61■□□□□ 0.73
CPSF1-202ENST00000527827 POLR1DQ9Y2S0 133 aa19.61■□□□□ 0.73
CPSF1-202ENST00000527827 FPR3P25089 353 aa19.6■□□□□ 0.73
CPSF1-202ENST00000527827 PSMB10P40306 273 aa19.6■□□□□ 0.73
CPSF1-202ENST00000527827 CDKN2AP42771 156 aaKnown RBP19.6■□□□□ 0.73
CPSF1-202ENST00000527827 BPIFB3P59826 476 aa19.6■□□□□ 0.73
CPSF1-202ENST00000527827 GPR157Q5UAW9 335 aa19.6■□□□□ 0.73
CPSF1-202ENST00000527827 CORO6Q6QEF8 472 aa19.6■□□□□ 0.73
CPSF1-202ENST00000527827 RRM2BQ7LG56 351 aa19.6■□□□□ 0.73
CPSF1-202ENST00000527827 ADCK1Q86TW2 530 aa19.6■□□□□ 0.73
CPSF1-202ENST00000527827 C19orf18Q8NEA5 215 aa19.6■□□□□ 0.73
CPSF1-202ENST00000527827 HSH2DQ96JZ2 352 aa19.6■□□□□ 0.73
CPSF1-202ENST00000527827 TSSK2Q96PF2 358 aa19.6■□□□□ 0.73
CPSF1-202ENST00000527827 CITED1Q99966 193 aa19.6■□□□□ 0.73
CPSF1-202ENST00000527827 ANKRD19PQ9H560 264 aa19.6■□□□□ 0.73
CPSF1-202ENST00000527827 IER3IP1Q9Y5U9 82 aa19.6■□□□□ 0.73
CPSF1-202ENST00000527827 DCTN6O00399 190 aa19.59■□□□□ 0.73
CPSF1-202ENST00000527827 CXCR6O00574 342 aa19.59■□□□□ 0.73
CPSF1-202ENST00000527827 NDUFA7O95182 113 aa19.59■□□□□ 0.73
CPSF1-202ENST00000527827 RAD23AP54725 363 aa19.59■□□□□ 0.73
CPSF1-202ENST00000527827 HOXA4Q00056 320 aaPredicted RBP19.59■□□□□ 0.73
CPSF1-202ENST00000527827 SF3A3Q12874 501 aaKnown RBP eCLIP19.59■□□□□ 0.73
CPSF1-202ENST00000527827 KRTAP27-1Q3LI81 207 aa19.59■□□□□ 0.73
CPSF1-202ENST00000527827 CLEC12AQ5QGZ9 265 aa19.59■□□□□ 0.73
CPSF1-202ENST00000527827 OLFML2AQ68BL7 652 aa19.59■□□□□ 0.73
CPSF1-202ENST00000527827 C17orf107Q6ZR85 190 aa19.59■□□□□ 0.73
CPSF1-202ENST00000527827 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.59■□□□□ 0.73
CPSF1-202ENST00000527827 SLC15A3Q8IY34 581 aa19.59■□□□□ 0.73
CPSF1-202ENST00000527827 Q8TCH9 128 aa19.59■□□□□ 0.73
CPSF1-202ENST00000527827 RCN3Q96D15 328 aa19.59■□□□□ 0.73
CPSF1-202ENST00000527827 RPS6KA6Q9UK32 745 aa19.59■□□□□ 0.73
CPSF1-202ENST00000527827 ENSAO43768 121 aaKnown RBP19.58■□□□□ 0.72
CPSF1-202ENST00000527827 TXNDC12O95881 172 aa19.58■□□□□ 0.72
CPSF1-202ENST00000527827 CRYBA1P05813 215 aa19.58■□□□□ 0.72
CPSF1-202ENST00000527827 SFTPBP07988 381 aa19.58■□□□□ 0.72
CPSF1-202ENST00000527827 MELTFP08582 738 aa19.58■□□□□ 0.72
CPSF1-202ENST00000527827 COX10Q12887 443 aa19.58■□□□□ 0.72
CPSF1-202ENST00000527827 GK2Q14410 553 aaPredicted RBP19.58■□□□□ 0.72
CPSF1-202ENST00000527827 FKBP9P1Q75LS8 142 aa19.58■□□□□ 0.72
CPSF1-202ENST00000527827 RHOUQ7L0Q8 258 aa19.58■□□□□ 0.72
CPSF1-202ENST00000527827 TMEM86BQ8N661 226 aa19.58■□□□□ 0.72
CPSF1-202ENST00000527827 CELF2-AS1Q8N7Q2 184 aa19.58■□□□□ 0.72
CPSF1-202ENST00000527827 PCGF1Q9BSM1 259 aa19.58■□□□□ 0.72
CPSF1-202ENST00000527827 HCAR1Q9BXC0 346 aa19.58■□□□□ 0.72
CPSF1-202ENST00000527827 CTSZQ9UBR2 303 aa19.58■□□□□ 0.72
CPSF1-202ENST00000527827 TMCC3Q9ULS5 477 aa19.58■□□□□ 0.72
CPSF1-202ENST00000527827 ENPP4Q9Y6X5 453 aa19.58■□□□□ 0.72
CPSF1-202ENST00000527827 IGLV1-36A0A0B4J1U3 117 aa19.57■□□□□ 0.72
CPSF1-202ENST00000527827 FAM20BO75063 409 aa19.57■□□□□ 0.72
CPSF1-202ENST00000527827 ACSM4P0C7M7 580 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms