RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 HKR1P10072 659 aa18.78■□□□□ 0.6
TRAPPC4-208ENST00000527680 FXYD6P3P58550 94 aa18.78■□□□□ 0.6
TRAPPC4-208ENST00000527680 GNB2P62879 340 aa18.78■□□□□ 0.6
TRAPPC4-208ENST00000527680 KLF17Q5JT82 389 aaPredicted RBP18.78■□□□□ 0.6
TRAPPC4-208ENST00000527680 LEG1Q6P5S2 330 aa18.78■□□□□ 0.6
TRAPPC4-208ENST00000527680 BTNL3Q6UXE8 466 aa18.78■□□□□ 0.6
TRAPPC4-208ENST00000527680 MOGAT3Q86VF5 341 aa18.78■□□□□ 0.6
TRAPPC4-208ENST00000527680 PLEKHA8Q96JA3 519 aa18.78■□□□□ 0.6
TRAPPC4-208ENST00000527680 COQ7Q99807 217 aa18.78■□□□□ 0.6
TRAPPC4-208ENST00000527680 DCAF13Q9NV06 445 aaKnown RBP18.78■□□□□ 0.6
TRAPPC4-208ENST00000527680 MIOXQ9UGB7 285 aa18.78■□□□□ 0.6
TRAPPC4-208ENST00000527680 LHFPL6Q9Y693 200 aa18.78■□□□□ 0.6
TRAPPC4-208ENST00000527680 V9GYQ6 96 aa18.78■□□□□ 0.6
TRAPPC4-208ENST00000527680 IGHV3OR16-10A0A075B7F0 116 aa18.77■□□□□ 0.6
TRAPPC4-208ENST00000527680 A8MXK9 166 aa18.77■□□□□ 0.6
TRAPPC4-208ENST00000527680 F5H5K5 113 aa18.77■□□□□ 0.6
TRAPPC4-208ENST00000527680 F5H5P2 479 aa18.77■□□□□ 0.6
TRAPPC4-208ENST00000527680 DCTN6O00399 190 aa18.77■□□□□ 0.6
TRAPPC4-208ENST00000527680 HLA-DQA2P01906 255 aa18.77■□□□□ 0.6
TRAPPC4-208ENST00000527680 NOS3P29474 1203 aa18.77■□□□□ 0.6
TRAPPC4-208ENST00000527680 CD80P33681 288 aa18.77■□□□□ 0.6
TRAPPC4-208ENST00000527680 MDH1P40925 334 aaKnown RBP18.77■□□□□ 0.6
TRAPPC4-208ENST00000527680 SMIM11AP58511 58 aa18.77■□□□□ 0.6
TRAPPC4-208ENST00000527680 C1orf87Q8N0U7 546 aa18.77■□□□□ 0.6
TRAPPC4-208ENST00000527680 RNF148Q8N7C7 305 aa18.77■□□□□ 0.6
TRAPPC4-208ENST00000527680 OR2AJ1Q8NGZ0 328 aa18.77■□□□□ 0.6
TRAPPC4-208ENST00000527680 C7orf34Q96L11 122 aa18.77■□□□□ 0.6
TRAPPC4-208ENST00000527680 NMNAT3Q96T66 252 aa18.77■□□□□ 0.6
TRAPPC4-208ENST00000527680 PITX2Q99697 317 aa18.77■□□□□ 0.6
TRAPPC4-208ENST00000527680 SLC30A2Q9BRI3 323 aa18.77■□□□□ 0.6
TRAPPC4-208ENST00000527680 DNAJC9-AS1A6NH13 148 aa18.76■□□□□ 0.59
TRAPPC4-208ENST00000527680 GADD45GO95257 159 aa18.76■□□□□ 0.59
TRAPPC4-208ENST00000527680 IRF2P14316 349 aa18.76■□□□□ 0.59
TRAPPC4-208ENST00000527680 SELEP16581 610 aa18.76■□□□□ 0.59
TRAPPC4-208ENST00000527680 CPT2P23786 658 aa18.76■□□□□ 0.59
TRAPPC4-208ENST00000527680 FPR3P25089 353 aa18.76■□□□□ 0.59
TRAPPC4-208ENST00000527680 SLC6A6P31641 620 aa18.76■□□□□ 0.59
TRAPPC4-208ENST00000527680 HIST1H3AP68431 136 aa18.76■□□□□ 0.59
TRAPPC4-208ENST00000527680 PAX8Q06710 450 aa18.76■□□□□ 0.59
TRAPPC4-208ENST00000527680 RFX4Q33E94 735 aa18.76■□□□□ 0.59
TRAPPC4-208ENST00000527680 HIST2H3PS2Q5TEC6 136 aa18.76■□□□□ 0.59
TRAPPC4-208ENST00000527680 LRRN1Q6UXK5 716 aa18.76■□□□□ 0.59
TRAPPC4-208ENST00000527680 HIST2H3AQ71DI3 136 aa18.76■□□□□ 0.59
TRAPPC4-208ENST00000527680 KLBQ86Z14 1044 aa18.76■□□□□ 0.59
TRAPPC4-208ENST00000527680 LINC00346Q8IVM7 164 aa18.76■□□□□ 0.59
TRAPPC4-208ENST00000527680 OR6V1Q8N148 313 aa18.76■□□□□ 0.59
TRAPPC4-208ENST00000527680 FAM86B1Q8N7N1 296 aa18.76■□□□□ 0.59
TRAPPC4-208ENST00000527680 OR4K13Q8NH42 304 aa18.76■□□□□ 0.59
TRAPPC4-208ENST00000527680 FANK1Q8TC84 345 aa18.76■□□□□ 0.59
TRAPPC4-208ENST00000527680 IFT27Q9BW83 186 aa18.76■□□□□ 0.59
TRAPPC4-208ENST00000527680 SPAG4Q9NPE6 437 aa18.76■□□□□ 0.59
TRAPPC4-208ENST00000527680 ABCD2Q9UBJ2 740 aa18.76■□□□□ 0.59
TRAPPC4-208ENST00000527680 IQCF6A8MYZ5 107 aa18.75■□□□□ 0.59
TRAPPC4-208ENST00000527680 LCATP04180 440 aa18.75■□□□□ 0.59
TRAPPC4-208ENST00000527680 HLA-DPB1P04440 258 aa18.75■□□□□ 0.59
TRAPPC4-208ENST00000527680 SPIBQ01892 262 aa18.75■□□□□ 0.59
TRAPPC4-208ENST00000527680 COX10Q12887 443 aa18.75■□□□□ 0.59
TRAPPC4-208ENST00000527680 SLC36A3Q495N2 470 aa18.75■□□□□ 0.59
TRAPPC4-208ENST00000527680 NLRC3Q7RTR2 1065 aa18.75■□□□□ 0.59
TRAPPC4-208ENST00000527680 RAB40AQ8WXH6 277 aa18.75■□□□□ 0.59
TRAPPC4-208ENST00000527680 SLC25A28Q96A46 364 aa18.75■□□□□ 0.59
TRAPPC4-208ENST00000527680 NEIL1Q96FI4 390 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC4-208ENST00000527680 TMEM246Q9BRR3 403 aa18.75■□□□□ 0.59
TRAPPC4-208ENST00000527680 ZNF747Q9BV97 191 aa18.75■□□□□ 0.59
TRAPPC4-208ENST00000527680 NSRP1Q9H0G5 558 aaKnown RBP18.75■□□□□ 0.59
TRAPPC4-208ENST00000527680 OR52D1Q9H346 318 aa18.75■□□□□ 0.59
TRAPPC4-208ENST00000527680 ZMAT3Q9HA38 289 aaKnown RBP18.75■□□□□ 0.59
TRAPPC4-208ENST00000527680 RPRD1BQ9NQG5 326 aaKnown RBP18.75■□□□□ 0.59
TRAPPC4-208ENST00000527680 ZNF446Q9NWS9 450 aa18.75■□□□□ 0.59
TRAPPC4-208ENST00000527680 IGLV1-36A0A0B4J1U3 117 aa18.74■□□□□ 0.59
TRAPPC4-208ENST00000527680 MLNRO43193 412 aa18.74■□□□□ 0.59
TRAPPC4-208ENST00000527680 OR10H3O60404 316 aa18.74■□□□□ 0.59
TRAPPC4-208ENST00000527680 HIST1H1CP16403 213 aaKnown RBP18.74■□□□□ 0.59
TRAPPC4-208ENST00000527680 MTNR1AP48039 350 aa18.74■□□□□ 0.59
TRAPPC4-208ENST00000527680 PRSS12P56730 875 aa18.74■□□□□ 0.59
TRAPPC4-208ENST00000527680 DBPQ10586 325 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC4-208ENST00000527680 ECH1Q13011 328 aa18.74■□□□□ 0.59
TRAPPC4-208ENST00000527680 MALLQ13021 153 aa18.74■□□□□ 0.59
TRAPPC4-208ENST00000527680 RSPO1Q2MKA7 263 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC4-208ENST00000527680 FAM201AQ5SY85 155 aa18.74■□□□□ 0.59
TRAPPC4-208ENST00000527680 SHISA2Q6UWI4 295 aa18.74■□□□□ 0.59
TRAPPC4-208ENST00000527680 PARP8Q8N3A8 854 aa18.74■□□□□ 0.59
TRAPPC4-208ENST00000527680 OR8B3Q8NGG8 313 aa18.74■□□□□ 0.59
TRAPPC4-208ENST00000527680 MCUR1Q96AQ8 359 aa18.74■□□□□ 0.59
TRAPPC4-208ENST00000527680 PYURFQ96I23 114 aa18.74■□□□□ 0.59
TRAPPC4-208ENST00000527680 ZNF48Q96MX3 618 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC4-208ENST00000527680 OR8B2Q96RD0 313 aa18.74■□□□□ 0.59
TRAPPC4-208ENST00000527680 ELAC2Q9BQ52 826 aaKnown RBP18.74■□□□□ 0.59
TRAPPC4-208ENST00000527680 IGHV4-38-2P0DP08 117 aa18.73■□□□□ 0.59
TRAPPC4-208ENST00000527680 CFAP77Q6ZQR2 320 aa18.73■□□□□ 0.59
TRAPPC4-208ENST00000527680 NAA40Q86UY6 237 aa18.73■□□□□ 0.59
TRAPPC4-208ENST00000527680 SLC26A10Q8NG04 563 aa18.73■□□□□ 0.59
TRAPPC4-208ENST00000527680 OR11L1Q8NGX0 322 aa18.73■□□□□ 0.59
TRAPPC4-208ENST00000527680 SPRYD4Q8WW59 207 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC4-208ENST00000527680 SLCO4A1Q96BD0 722 aa18.73■□□□□ 0.59
TRAPPC4-208ENST00000527680 DHRS1Q96LJ7 313 aa18.73■□□□□ 0.59
TRAPPC4-208ENST00000527680 ATF6BQ99941 703 aa18.73■□□□□ 0.59
TRAPPC4-208ENST00000527680 TMCC3Q9ULS5 477 aa18.73■□□□□ 0.59
TRAPPC4-208ENST00000527680 IGHV2-70DA0A0C4DH43 119 aa18.72■□□□□ 0.59
TRAPPC4-208ENST00000527680 ARPC3O15145 178 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms