RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 MIEN1Q9BRT3 115 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 TRMT61BQ9BVS5 477 aaKnown RBP3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 COLEC11Q9BWP8 271 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 SELENOIQ9C0D9 397 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 HRH4Q9H3N8 390 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 CLMPQ9H6B4 373 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 CWH43Q9H720 699 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 ACTR8Q9H981 624 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 NMRAL1Q9HBL8 299 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 EML4Q9HC35 981 aaKnown RBP3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 GPN1Q9HCN4 374 aaPredicted RBP3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 MMP25Q9NPA2 562 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 RPS10P5Q9NQ39 176 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 SLC52A3Q9NQ40 469 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 RLIMQ9NVW2 624 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 TXNL4BQ9NX01 149 aaKnown RBP3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 TMEM161AQ9NX61 479 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 SIDT1Q9NXL6 827 aaKnown RBP3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 B3GAT1Q9P2W7 334 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 STEAP1Q9UHE8 339 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 TUBD1Q9UJT1 453 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 IKZF2Q9UKS7 526 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 NEU3Q9UQ49 428 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 OSGIN2Q9Y236 505 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 ST3GAL6Q9Y274 331 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 LSM2Q9Y333 95 aaKnown RBP3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 HDGFL3Q9Y3E1 203 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 OR10H1Q9Y4A9 318 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 UBIAD1Q9Y5Z9 338 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 PLXND1Q9Y4D7 1925 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 FRMPD3Q5JV73 1810 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 TCF20Q9UGU0 1960 aaKnown RBP3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 RLFQ13129 1914 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 TRAV26-1A0A087WT03 109 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 KCNE1BA0A087WTH5 132 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 FXYD6-FXYD2A0A087WZ82 144 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 GGT3PA6NGU5 568 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 RNF212BA8MTL3 300 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 OR11H12B2RN74 326 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 FAM157AC9JC47 383 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 PPP5D1E7EU14 171 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 F5H5P2 479 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 RNASEK-C17orf49H0YIS7 233 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 TRAPPC2LH3BP13 241 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 M0QZ24 198 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 SLC33A1O00400 549 aaPredicted RBP3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 FAAHO00519 579 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 GABRDO14764 452 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 ARPC3O15145 178 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 GSTZ1O43708 216 aaPredicted RBP3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 MPZL2O60487 215 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 CREBL2O60519 120 aaPredicted RBP3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 STK16O75716 305 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 KCNK5O95279 499 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 TSPAN13O95857 204 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 SCGB1D1O95968 90 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 LCATP04180 440 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 RLN1P04808 185 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 FABP3P05413 133 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 CD14P08571 375 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 ADRA2AP08913 450 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 SFTA3P0C7M3 94 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 LAMP1P11279 417 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 SLC25A4P12235 298 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 BCKDHAP12694 445 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 UNGP13051 313 aaPredicted RBP3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 CD58P19256 250 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 DRD5P21918 477 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 DGKAP23743 735 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 CCND3P30281 292 aaPredicted RBP3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 FGF9P31371 208 aaPredicted RBP3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 CD80P33681 288 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 ARL3P36405 182 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 RPL3P39023 403 aaKnown RBP3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 SOX3P41225 446 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 RPS10P46783 165 aaKnown RBP3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 CXCR3P49682 368 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 PPOXP50336 477 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 CSRP3P50461 194 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 RAB28P51157 221 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 DAPP51397 102 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 AKR1C2P52895 323 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 GEMP55040 296 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 OR4D2P58180 307 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 BTG2P78543 158 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 EFNB1P98172 346 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 NAAAQ02083 359 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 PAX5Q02548 391 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 CACNG1Q06432 222 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 IL10RBQ08334 325 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 RBBP4Q09028 425 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 ST3GAL4Q11206 333 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 RAB31Q13636 194 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 IL10RAQ13651 578 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 TNFAIP1Q13829 316 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 CRMP1Q14194 572 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 ZNF235Q14590 738 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 TMEM132DQ14C87 1099 aa3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 TSNQ15631 228 aaKnown RBP3.29□□□□□ -1.88
CLNS1A-209ENST00000527299 UBE2V2Q15819 145 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms