RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 DCLRE1CQ96SD1 692 aaKnown RBP9.25□□□□□ -0.93
NEDD8-205ENST00000527046 TBX5Q99593 518 aa9.25□□□□□ -0.93
NEDD8-205ENST00000527046 DOK1Q99704 481 aa9.25□□□□□ -0.93
NEDD8-205ENST00000527046 JAM3Q9BX67 310 aa9.25□□□□□ -0.93
NEDD8-205ENST00000527046 RASSF4Q9H2L5 321 aa9.25□□□□□ -0.93
NEDD8-205ENST00000527046 VCXQ9H320 206 aa9.25□□□□□ -0.93
NEDD8-205ENST00000527046 VCX3BQ9H321 246 aa9.25□□□□□ -0.93
NEDD8-205ENST00000527046 ZNF442Q9H7R0 627 aa9.25□□□□□ -0.93
NEDD8-205ENST00000527046 CDH20Q9HBT6 801 aa9.25□□□□□ -0.93
NEDD8-205ENST00000527046 PSORS1C1Q9UIG5 152 aa9.25□□□□□ -0.93
NEDD8-205ENST00000527046 GRIP1Q9Y3R0 1128 aa9.25□□□□□ -0.93
NEDD8-205ENST00000527046 LRP12Q9Y561 859 aa9.25□□□□□ -0.93
NEDD8-205ENST00000527046 ATP23Q9Y6H3 246 aa9.25□□□□□ -0.93
NEDD8-205ENST00000527046 AKAP6Q13023 2319 aa9.25□□□□□ -0.93
NEDD8-205ENST00000527046 ASH1LQ9NR48 2969 aaKnown RBP9.24□□□□□ -0.93
NEDD8-205ENST00000527046 UNC79Q9P2D8 2635 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 IGLV3-9A0A075B6K5 115 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 ZNF878C9JN71 531 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 F5H5K5 113 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 CLPTM1O96005 669 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 SLC2A1P11166 492 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 ZNF250P15622 560 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 CD53P19397 219 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 APOBEC3AP31941 199 aaPredicted RBP9.24□□□□□ -0.93
NEDD8-205ENST00000527046 MPV17P39210 176 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 PRKXP51817 358 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 RAB40BQ12829 278 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 POU4F2Q12837 409 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 SNTB2Q13425 540 aaKnown RBP9.24□□□□□ -0.93
NEDD8-205ENST00000527046 TNK1Q13470 666 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 DEGS2Q6QHC5 323 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 ZNF322Q6U7Q0 402 aaPredicted RBP9.24□□□□□ -0.93
NEDD8-205ENST00000527046 PLEKHG7Q6ZR37 379 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 TMEM200AQ86VY9 491 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 ZNF679Q8IYX0 411 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 SLC25A40Q8TBP6 338 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 SGK3Q96BR1 496 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 LURAP1Q96LR2 239 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 MNTQ99583 582 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 ZNF184Q99676 751 aaPredicted RBP9.24□□□□□ -0.93
NEDD8-205ENST00000527046 SOX7Q9BT81 388 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 TRAF4Q9BUZ4 470 aaPredicted RBP9.24□□□□□ -0.93
NEDD8-205ENST00000527046 MRPL37Q9BZE1 423 aaKnown RBP9.24□□□□□ -0.93
NEDD8-205ENST00000527046 OR2J1Q9GZK6 312 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 OR51B6Q9H340 312 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 DUSP21Q9H596 190 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 ELOVL3Q9HB03 270 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 G6PC2Q9NQR9 355 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 CLEC2DQ9UHP7 191 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 LAMP5Q9UJQ1 280 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 RPL36Q9Y3U8 105 aaKnown RBP9.24□□□□□ -0.93
NEDD8-205ENST00000527046 LRRC42Q9Y546 428 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 APCP25054 2843 aa9.24□□□□□ -0.93
NEDD8-205ENST00000527046 ZNF670-ZNF695F2Z2N8 137 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 M0R135 149 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 SLC1A7O00341 560 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 LILRA1O75019 489 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 FAM20BO75063 409 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 ATE1O95260 518 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 IGLV3-1P01715 115 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 HTR1AP08908 422 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 OR4A8P0C604 315 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 PIPP12273 146 aaPredicted RBP9.23□□□□□ -0.93
NEDD8-205ENST00000527046 C21orf33P30042 268 aaPredicted RBP9.23□□□□□ -0.93
NEDD8-205ENST00000527046 DCTDP32321 178 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 RAD52P43351 418 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 HSPA13P48723 471 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 ETV1P50549 477 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 FABP6P51161 128 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 PRSS12P56730 875 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 OR12D2P58182 307 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 PPP1CBP62140 327 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 EGR3Q06889 387 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 MFGE8Q08431 387 aaPredicted RBP9.23□□□□□ -0.93
NEDD8-205ENST00000527046 PSG7Q13046 419 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 HLXQ14774 488 aaPredicted RBP9.23□□□□□ -0.93
NEDD8-205ENST00000527046 EFNB3Q15768 340 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 CDONQ4KMG0 1287 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 MBNL2Q5VZF2 373 aaKnown RBP9.23□□□□□ -0.93
NEDD8-205ENST00000527046 ZNF544Q6NX49 715 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 VHLLQ6RSH7 139 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 DRAM2Q6UX65 266 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 LHFPL3Q86UP9 236 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 ACBD7Q8N6N7 88 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 BPIFB6Q8NFQ5 453 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 OR10H4Q8NGA5 316 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 OR1J1Q8NGS3 322 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 KLF14Q8TD94 323 aaPredicted RBP9.23□□□□□ -0.93
NEDD8-205ENST00000527046 ASB17Q8WXJ9 295 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 RORBQ92753 470 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 FBXW5Q969U6 566 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 MRPL24Q96A35 216 aaKnown RBP9.23□□□□□ -0.93
NEDD8-205ENST00000527046 ZNF799Q96GE5 643 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 LYZL4Q96KX0 146 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 REPIN1Q9BWE0 567 aaKnown RBP9.23□□□□□ -0.93
NEDD8-205ENST00000527046 BCL2L14Q9BZR8 327 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 PLK3Q9H4B4 646 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 ISG20L2Q9H9L3 353 aaKnown RBP9.23□□□□□ -0.93
NEDD8-205ENST00000527046 UBTD1Q9HAC8 227 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 FAM206AQ9NX38 181 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms