RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 GIFP27352 417 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 CALCRP30988 508 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 ZNF83P51522 516 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 CHN2P52757 468 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 HCCSP53701 268 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 AQP4P55087 323 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 ISL1P61371 349 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 SNRPGP62308 76 aaKnown RBP9.35□□□□□ -0.91
NEDD8-204ENST00000526430 SPOCK1Q08629 439 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 RAB39AQ14964 217 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 C3orf36Q3SXR2 165 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 TEX30Q5JUR7 227 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 SLC18B1Q6NT16 456 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 CORO6Q6QEF8 472 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 PAQR4Q8N4S7 273 aaPredicted RBP9.35□□□□□ -0.91
NEDD8-204ENST00000526430 OR8J1Q8NGP2 316 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 TRUB1Q8WWH5 349 aaKnown RBP9.35□□□□□ -0.91
NEDD8-204ENST00000526430 SORCS2Q96PQ0 1159 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 AMELYQ99218 206 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 OR2H1Q9GZK4 316 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 OR51V1Q9H2C8 321 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 ENOPH1Q9UHY7 261 aa9.35□□□□□ -0.91
NEDD8-204ENST00000526430 LRP5LA4QPB2 252 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 PRR32B1ATL7 298 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 RER1O15258 196 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 PRODHO43272 600 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 SYNGR3O43761 229 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 SERPINA5P05154 406 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 ADRA2AP08913 450 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 CECR9P0C854 216 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 APEX1P27695 318 aaKnown RBP9.34□□□□□ -0.91
NEDD8-204ENST00000526430 GSTT1P30711 240 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 IL2RGP31785 369 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 UBE2NP61088 152 aaKnown RBP9.34□□□□□ -0.91
NEDD8-204ENST00000526430 HGFACQ04756 655 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 APOFQ13790 326 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 MSMPQ1L6U9 139 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 GSG1Q2KHT4 349 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 KRTAP27-1Q3LI81 207 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 FBLN7Q53RD9 439 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 PABPC1L2AQ5JQF8 200 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 ZNF691Q5VV52 312 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 NXNL2Q5VZ03 156 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 ZNF774Q6NX45 483 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 MEPCEQ7L2J0 689 aaKnown RBP9.34□□□□□ -0.91
NEDD8-204ENST00000526430 SLC16A14Q7RTX9 510 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 SYT9Q86SS6 491 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 LINC00346Q8IVM7 164 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 DHRSXQ8N5I4 330 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 AKR7LQ8NHP1 331 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 FAM81AQ8TBF8 368 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 FBLIM1Q8WUP2 373 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 POM121L2Q96KW2 1035 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 ZNF582Q96NG8 517 aaPredicted RBP9.34□□□□□ -0.91
NEDD8-204ENST00000526430 SLC38A2Q96QD8 506 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 HAO2Q9NYQ3 351 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 MOKQ9UQ07 419 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 KLHDC2Q9Y2U9 406 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 SPEF1Q9Y4P9 236 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 TIMM10BQ9Y5J6 103 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 GMPPBQ9Y5P6 360 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 COMMD3-BMI1R4GMX3 469 aa9.34□□□□□ -0.91
NEDD8-204ENST00000526430 H0YAE9 185 aa9.33□□□□□ -0.92
NEDD8-204ENST00000526430 J3QRE1 110 aa9.33□□□□□ -0.92
NEDD8-204ENST00000526430 M0R1B8 84 aa9.33□□□□□ -0.92
NEDD8-204ENST00000526430 ZNF593O00488 134 aaPredicted RBP9.33□□□□□ -0.92
NEDD8-204ENST00000526430 SELENOFO60613 162 aa9.33□□□□□ -0.92
NEDD8-204ENST00000526430 LILRA1O75019 489 aa9.33□□□□□ -0.92
NEDD8-204ENST00000526430 ENTPD6O75354 484 aa9.33□□□□□ -0.92
NEDD8-204ENST00000526430 UBL3O95164 117 aa9.33□□□□□ -0.92
NEDD8-204ENST00000526430 HKR1P10072 659 aa9.33□□□□□ -0.92
NEDD8-204ENST00000526430 CD79AP11912 226 aa9.33□□□□□ -0.92
NEDD8-204ENST00000526430 CCL2P13500 99 aa9.33□□□□□ -0.92
NEDD8-204ENST00000526430 FMO3P31513 532 aa9.33□□□□□ -0.92
NEDD8-204ENST00000526430 APOBEC3AP31941 199 aaPredicted RBP9.33□□□□□ -0.92
NEDD8-204ENST00000526430 ARR3P36575 388 aa9.33□□□□□ -0.92
NEDD8-204ENST00000526430 IDH3GP51553 393 aaPredicted RBP9.33□□□□□ -0.92
NEDD8-204ENST00000526430 NAAAQ02083 359 aa9.33□□□□□ -0.92
NEDD8-204ENST00000526430 GLO1Q04760 184 aa9.33□□□□□ -0.92
NEDD8-204ENST00000526430 SWI5Q1ZZU3 235 aa9.33□□□□□ -0.92
NEDD8-204ENST00000526430 SLC35D3Q5M8T2 416 aa9.33□□□□□ -0.92
NEDD8-204ENST00000526430 DNM1P34Q6PK57 102 aa9.33□□□□□ -0.92
NEDD8-204ENST00000526430 CFAP77Q6ZQR2 320 aa9.33□□□□□ -0.92
NEDD8-204ENST00000526430 VASH1Q7L8A9 365 aaPredicted RBP9.33□□□□□ -0.92
NEDD8-204ENST00000526430 DPPA2Q7Z7J5 298 aa9.33□□□□□ -0.92
NEDD8-204ENST00000526430 GLCCI1Q86VQ1 547 aa9.33□□□□□ -0.92
NEDD8-204ENST00000526430 PROKR2Q8NFJ6 384 aa9.33□□□□□ -0.92
NEDD8-204ENST00000526430 ST7LQ8TDW4 575 aa9.33□□□□□ -0.92
NEDD8-204ENST00000526430 WACQ9BTA9 647 aa9.33□□□□□ -0.92
NEDD8-204ENST00000526430 ADI1Q9BV57 179 aa9.33□□□□□ -0.92
NEDD8-204ENST00000526430 ADGRL4Q9HBW9 690 aa9.33□□□□□ -0.92
NEDD8-204ENST00000526430 DNAJC27Q9NZQ0 273 aa9.33□□□□□ -0.92
NEDD8-204ENST00000526430 ASH2LQ9UBL3 628 aa9.33□□□□□ -0.92
NEDD8-204ENST00000526430 IGHV2OR16-5A0A0B4J2B6 119 aa9.32□□□□□ -0.92
NEDD8-204ENST00000526430 OR6C6A6NF89 314 aa9.32□□□□□ -0.92
NEDD8-204ENST00000526430 RGS9O75916 674 aaPredicted RBP9.32□□□□□ -0.92
NEDD8-204ENST00000526430 FARS2O95363 451 aaKnown RBP9.32□□□□□ -0.92
NEDD8-204ENST00000526430 ALOX5APP20292 161 aa9.32□□□□□ -0.92
NEDD8-204ENST00000526430 CAPGP40121 348 aa9.32□□□□□ -0.92
NEDD8-204ENST00000526430 WNT5AP41221 380 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms