RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 NPIPA2E9PIF3 369 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 NPIPA3F8WFD2 350 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 SULT2B1O00204 365 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 KPNA4O00629 521 aaPredicted RBP3.91□□□□□ -1.78
USP48-211ENST00000526044 BCKDKO14874 412 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 WISP2O76076 250 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 AHSA1O95433 338 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 DIRAS3O95661 229 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 ATP6V1G2O95670 118 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 ANXA8P13928 327 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 POU2F1P14859 743 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 ZNF23P17027 643 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 GSTM3P21266 225 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 PRKACGP22612 351 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 ELK4P28324 431 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 SFTPDP35247 375 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 SOX6P35712 828 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 RPS5P46782 204 aaKnown RBP3.91□□□□□ -1.78
USP48-211ENST00000526044 BMXP51813 675 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 SUCLG1P53597 346 aaKnown RBP3.91□□□□□ -1.78
USP48-211ENST00000526044 IST1P53990 364 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 UGT2B15P54855 530 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 CTBP2P56545 445 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 CLDN20P56880 219 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 OR2B6P58173 313 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 SEC61BP60468 96 aaKnown RBP3.91□□□□□ -1.78
USP48-211ENST00000526044 GMFBP60983 142 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 CSNK2A1P68400 391 aaPredicted RBP3.91□□□□□ -1.78
USP48-211ENST00000526044 SLC35A1P78382 337 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 SRYQ05066 204 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 SCN1BQ07699 218 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 ACACAQ13085 2346 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 EIF2S3LQ2VIR3 472 aaKnown RBP3.91□□□□□ -1.78
USP48-211ENST00000526044 ZNF672Q499Z4 452 aaPredicted RBP3.91□□□□□ -1.78
USP48-211ENST00000526044 SYT14P1Q58G82 188 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 IGSF11Q5DX21 431 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 C6orf141Q5SZD1 244 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 OTUD3Q5T2D3 398 aaPredicted RBP3.91□□□□□ -1.78
USP48-211ENST00000526044 WLSQ5T9L3 541 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 C1orf140Q5VVS0 124 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 TMEM225Q6GV28 225 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 C3orf33Q6P1S2 294 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 C1orf94Q6P1W5 598 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 KCTD18Q6PI47 426 aaPredicted RBP3.91□□□□□ -1.78
USP48-211ENST00000526044 WDR88Q6ZMY6 472 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 ZBTB49Q6ZSB9 765 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 TMPPEQ6ZT21 453 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 TMPRSS11FQ6ZWK6 438 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 TMEM179BQ7Z7N9 219 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 HAPLN4Q86UW8 402 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 NR2C2APQ86WQ0 139 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 SIAH3Q8IW03 269 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 FOXRED2Q8IWF2 684 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 NRMQ8IXM6 262 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 PM20D2Q8IYS1 436 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 UBQLNLQ8IYU4 475 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 RFLNBQ8N5W9 214 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 OR4K5Q8NGD3 323 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 OR4C15Q8NGM1 316 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 OR6S1Q8NH40 331 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 OR2V1Q8NHB1 315 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 MFSD8Q8NHS3 518 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 PIGXQ8TBF5 258 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 MAGEE2Q8TD90 523 aaPredicted RBP3.91□□□□□ -1.78
USP48-211ENST00000526044 TMEM255BQ8WV15 326 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 OSTF1Q92882 214 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 TAAR8Q969N4 342 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 BPIFA2Q96DR5 249 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 SGTBQ96EQ0 304 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 ARL5BQ96KC2 179 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 GPR137Q96N19 417 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 OR5B2Q96R09 309 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 FEVQ99581 238 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 C9orf16Q9BUW7 83 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 ZNF426Q9BUY5 554 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 OSBPL10Q9BXB5 764 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 PRRG4Q9BZD6 226 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 SLC19A3Q9BZV2 496 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 UCK2Q9BZX2 261 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 OR11A1Q9GZK7 315 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 TMEM185BQ9H7F4 350 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 PPP1R3EQ9H7J1 279 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 COQ10BQ9H8M1 238 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 RNPEPL1Q9HAU8 725 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 MEPEQ9NQ76 525 aaPredicted RBP3.91□□□□□ -1.78
USP48-211ENST00000526044 NANSQ9NR45 359 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 GLRX2Q9NS18 164 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 MAN2C1Q9NTJ4 1040 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 ASF1BQ9NVP2 202 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 PAQR5Q9NXK6 330 aaPredicted RBP3.91□□□□□ -1.78
USP48-211ENST00000526044 VNN3Q9NY84 501 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 TINAGQ9UJW2 476 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 MGAT4BQ9UQ53 548 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 HDGFL3Q9Y3E1 203 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 LIPGQ9Y5X9 500 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 DMXL2Q8TDJ6 3036 aa3.9□□□□□ -1.78
USP48-211ENST00000526044 MPDZO75970 2070 aa3.9□□□□□ -1.78
USP48-211ENST00000526044 IGKV1D-42A0A075B6H8 117 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 IGHV4OR15-8A0A075B7B6 117 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 ARRDC5A6NEK1 342 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms