RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 SPATC1Q76KD6 591 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 RHOUQ7L0Q8 258 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 MEPCEQ7L2J0 689 aaKnown RBP4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 SLC16A9Q7RTY1 509 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 KRT77Q7Z794 578 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 TIGD4Q8IY51 512 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 FTMTQ8N4E7 242 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZNF525Q8N782 197 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 OR52H1Q8NGJ2 320 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 OR8J1Q8NGP2 316 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 OTOSQ8NHW6 89 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 UBASH3BQ8TF42 649 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 SPRYD4Q8WW59 207 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 TRUB1Q8WWH5 349 aaKnown RBP4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 SLC7A6Q92536 515 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 PTP4A1Q93096 173 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 MRPL48Q96GC5 212 aaKnown RBP4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 MARS2Q96GW9 593 aaKnown RBP4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 MAP6Q96JE9 813 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 C18orf12Q96KH6 178 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZNF582Q96NG8 517 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 RDH12Q96NR8 316 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 IL4I1Q96RQ9 567 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 MYCBPQ99417 103 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 MNTQ99583 582 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 TEAD3Q99594 435 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 KCNJ15Q99712 375 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 APOL4Q9BPW4 351 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 ABHD6Q9BV23 337 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 YIPF3Q9GZM5 350 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 NIPAL2Q9H841 368 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 MARCH7Q9H992 704 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 SAP30LQ9HAJ7 183 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 NKIRAS2Q9NYR9 191 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 PTTG3PQ9NZH4 202 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 WARS2Q9UGM6 360 aaKnown RBP4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 TMEFF2Q9UIK5 374 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 PURGQ9UJV8 347 aaKnown RBP4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 IKZF2Q9UKS7 526 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 N6AMT1Q9Y5N5 214 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 GMPPBQ9Y5P6 360 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 CACNA1DQ01668 2161 aa4.63□□□□□ -1.67
HMGB1P40-201ENST00000525121 FBN2P35556 2912 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 IGHV1-69-2A0A0G2JMI3 117 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 TMEM129A0AVI4 362 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 TRIM64A6NGJ6 449 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 GGT3PA6NGU5 568 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 TRIM64BA6NI03 449 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 RNF223E7ERA6 249 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 M0R129 80 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 SMAD7O15105 426 aaKnown RBP4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 SPRY3O43610 288 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZNF254O75437 659 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 CLPTM1O96005 669 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 MRPL3P09001 348 aaKnown RBP4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 INHBBP09529 407 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 ANPEPP15144 967 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 TNFRSF1AP19438 455 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 KITLGP21583 273 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 SLC2A5P22732 501 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 HTR1FP30939 366 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 MPV17P39210 176 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 CX3CR1P49238 355 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 SRP9P49458 86 aaKnown RBP4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 PRKXP51817 358 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 RIDAP52758 137 aaKnown RBP4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 ACTC1P68032 377 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 ACTA1P68133 377 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 CCL8P80075 99 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 MRPS11P82912 194 aaKnown RBP4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 TNFAIP6P98066 277 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 SLC3A1Q07837 685 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 MZT1Q08AG7 82 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 DBPQ10586 325 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 PSG7Q13046 419 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 TMED1Q13445 227 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 TNK1Q13470 666 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 GGTLC2Q14390 218 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 TSTQ16762 297 aaKnown RBP4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 LRRC36Q1X8D7 754 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 HFEQ30201 348 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 GFOD2Q3B7J2 385 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZNF829Q3KNS6 432 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZIK1Q3SY52 487 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 MEDAGQ5VYS4 303 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 FBXW12Q6X9E4 464 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 FAM220AQ7Z4H9 259 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 PEG10Q86TG7 708 aaKnown RBP4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 BIVMQ86UB2 503 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 LRP11Q86VZ4 500 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 COMMD2Q86X83 199 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 KRTAP1-3Q8IUG1 177 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 SLC35F2Q8IXU6 374 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZNF786Q8N393 782 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 PACRGLQ8N7B6 248 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 BBS1Q8NFJ9 593 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 OR2Z1Q8NG97 314 aa4.62□□□□□ -1.67
HMGB1P40-201ENST00000525121 OR13G1Q8NGZ3 307 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms