RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 LIPFP07098 398 aa9.57□□□□□ -0.88
SDCBP-211ENST00000523441 PAX6P26367 422 aa9.57□□□□□ -0.88
SDCBP-211ENST00000523441 PSMB10P40306 273 aa9.57□□□□□ -0.88
SDCBP-211ENST00000523441 CENPAP49450 140 aa9.57□□□□□ -0.88
SDCBP-211ENST00000523441 NPY4RP50391 375 aa9.57□□□□□ -0.88
SDCBP-211ENST00000523441 MTPNP58546 118 aa9.57□□□□□ -0.88
SDCBP-211ENST00000523441 ELF3P78545 371 aaPredicted RBP9.57□□□□□ -0.88
SDCBP-211ENST00000523441 MAB21L1Q13394 359 aa9.57□□□□□ -0.88
SDCBP-211ENST00000523441 SELPLGQ14242 412 aa9.57□□□□□ -0.88
SDCBP-211ENST00000523441 LRIF1Q5T3J3 769 aa9.57□□□□□ -0.88
SDCBP-211ENST00000523441 C11orf65Q8NCR3 313 aa9.57□□□□□ -0.88
SDCBP-211ENST00000523441 OR5L1Q8NGL2 311 aa9.57□□□□□ -0.88
SDCBP-211ENST00000523441 OR51A7Q8NH64 312 aa9.57□□□□□ -0.88
SDCBP-211ENST00000523441 TMEM239Q8WW34 195 aa9.57□□□□□ -0.88
SDCBP-211ENST00000523441 SPDL1Q96EA4 605 aa9.57□□□□□ -0.88
SDCBP-211ENST00000523441 NKX3-1Q99801 234 aaPredicted RBP9.57□□□□□ -0.88
SDCBP-211ENST00000523441 ECSITQ9BQ95 431 aa9.57□□□□□ -0.88
SDCBP-211ENST00000523441 ALG12Q9BV10 488 aa9.57□□□□□ -0.88
SDCBP-211ENST00000523441 EVA1AQ9H8M9 152 aa9.57□□□□□ -0.88
SDCBP-211ENST00000523441 ZNRD1Q9P1U0 126 aa9.57□□□□□ -0.88
SDCBP-211ENST00000523441 POLR1DQ9Y2S0 133 aa9.57□□□□□ -0.88
SDCBP-211ENST00000523441 hCG_1807616A0A1W2PRN6 198 aa9.56□□□□□ -0.88
SDCBP-211ENST00000523441 MEIOCA2RUB1 952 aa9.56□□□□□ -0.88
SDCBP-211ENST00000523441 DVL1O14640 695 aa9.56□□□□□ -0.88
SDCBP-211ENST00000523441 RER1O15258 196 aa9.56□□□□□ -0.88
SDCBP-211ENST00000523441 XPNPEP2O43895 674 aa9.56□□□□□ -0.88
SDCBP-211ENST00000523441 COX5BP10606 129 aa9.56□□□□□ -0.88
SDCBP-211ENST00000523441 IFI30P13284 250 aa9.56□□□□□ -0.88
SDCBP-211ENST00000523441 IGLL1P15814 213 aa9.56□□□□□ -0.88
SDCBP-211ENST00000523441 EEF1B2P24534 225 aaKnown RBP9.56□□□□□ -0.88
SDCBP-211ENST00000523441 PIN1Q13526 163 aaPredicted RBP9.56□□□□□ -0.88
SDCBP-211ENST00000523441 ZNF181Q2M3W8 571 aa9.56□□□□□ -0.88
SDCBP-211ENST00000523441 CLEC12AQ5QGZ9 265 aa9.56□□□□□ -0.88
SDCBP-211ENST00000523441 BEND6Q5SZJ8 279 aaPredicted RBP9.56□□□□□ -0.88
SDCBP-211ENST00000523441 INTS11Q5TA45 600 aaKnown RBP9.56□□□□□ -0.88
SDCBP-211ENST00000523441 LNX2Q8N448 690 aa9.56□□□□□ -0.88
SDCBP-211ENST00000523441 GALNT4Q8N4A0 578 aa9.56□□□□□ -0.88
SDCBP-211ENST00000523441 EIF1ADQ8N9N8 165 aaKnown RBP9.56□□□□□ -0.88
SDCBP-211ENST00000523441 OR4S1Q8NGB4 309 aa9.56□□□□□ -0.88
SDCBP-211ENST00000523441 OR1F12Q8NHA8 337 aa9.56□□□□□ -0.88
SDCBP-211ENST00000523441 PPP1R35Q8TAP8 253 aa9.56□□□□□ -0.88
SDCBP-211ENST00000523441 TAMM41Q96BW9 452 aa9.56□□□□□ -0.88
SDCBP-211ENST00000523441 CLPTM1LQ96KA5 538 aa9.56□□□□□ -0.88
SDCBP-211ENST00000523441 COG8Q96MW5 612 aa9.56□□□□□ -0.88
SDCBP-211ENST00000523441 CPPED1Q9BRF8 314 aaPredicted RBP9.56□□□□□ -0.88
SDCBP-211ENST00000523441 ZNF426Q9BUY5 554 aa9.56□□□□□ -0.88
SDCBP-211ENST00000523441 THAP1Q9NVV9 213 aa9.56□□□□□ -0.88
SDCBP-211ENST00000523441 RNF7Q9UBF6 113 aa9.56□□□□□ -0.88
SDCBP-211ENST00000523441 RIMS3Q9UJD0 308 aa9.56□□□□□ -0.88
SDCBP-211ENST00000523441 CORO2BQ9UQ03 480 aa9.56□□□□□ -0.88
SDCBP-211ENST00000523441 CAB39Q9Y376 341 aaPredicted RBP9.56□□□□□ -0.88
SDCBP-211ENST00000523441 MED31Q9Y3C7 131 aa9.56□□□□□ -0.88
SDCBP-211ENST00000523441 DNAH9Q9NYC9 4486 aa9.56□□□□□ -0.88
SDCBP-211ENST00000523441 DNAH3Q8TD57 4116 aa9.56□□□□□ -0.88
SDCBP-211ENST00000523441 A0A1B0GW55 424 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 A0A1W2PRX2 142 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 A6NLC8 198 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 H3BUX3 64 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 K7EIL1 84 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 LGALS8O00214 317 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 NPFFO15130 113 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 FCN3O75636 299 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 GRPP07492 148 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 VIMP08670 466 aaKnown RBP9.55□□□□□ -0.88
SDCBP-211ENST00000523441 DUX4L2P0CJ85 424 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 DUX4L3P0CJ86 424 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 DUX4L4P0CJ87 422 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 DUX4L5P0CJ88 424 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 DUX4L6P0CJ89 424 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 DUX4L7P0CJ90 424 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 CD28P10747 220 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 GPX2P18283 190 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 TUBG1P23258 451 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 CA6P23280 308 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 OR1E2P47887 323 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 VSNL1P62760 191 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 OR8G1Q15617 311 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 AGKQ53H12 422 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 CCDC92Q53HC0 331 aaPredicted RBP9.55□□□□□ -0.88
SDCBP-211ENST00000523441 LCE2DQ5TA82 110 aaPredicted RBP9.55□□□□□ -0.88
SDCBP-211ENST00000523441 DUX4L9Q6RFH8 374 aaPredicted RBP9.55□□□□□ -0.88
SDCBP-211ENST00000523441 FBXW12Q6X9E4 464 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 ZNF826PQ6ZT77 177 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 FOXL2NBQ6ZUU3 175 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 SYT9Q86SS6 491 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 FUNDC1Q8IVP5 155 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 OR4C13Q8NGP0 309 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 OR2T6Q8NHC8 308 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 RORBQ92753 470 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 RASD2Q96D21 266 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 MAELQ96JY0 434 aaKnown RBP9.55□□□□□ -0.88
SDCBP-211ENST00000523441 HCAR1Q9BXC0 346 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 PCDHAC1Q9H158 963 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 CNTD2Q9H8S5 307 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 FN3KRPQ9HA64 309 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 TUBG2Q9NRH3 451 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 C1orf123Q9NWV4 160 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 DUX4Q9UBX2 424 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 FBLN5Q9UBX5 448 aa9.55□□□□□ -0.88
SDCBP-211ENST00000523441 A6NIZ1 184 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms