RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 TRAM2Q15035 370 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 IGFBP7Q16270 282 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 TCEAL5Q5H9L2 206 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 KPRPQ5T749 579 aaPredicted RBP1.21□□□□□ -2.22
PCM1-217ENST00000522998 C1orf185Q5T7R7 199 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 PRR9Q5T870 116 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 H3F3CQ6NXT2 135 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 ZFP1Q6P2D0 407 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 SLC25A34Q6PIV7 304 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 MBOAT2Q6ZWT7 520 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 CBLN2Q8IUK8 224 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 WDFY1Q8IWB7 410 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 CMTM1Q8IZ96 169 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 COX18Q8N8Q8 333 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 SPANXA2-OT1Q8N9U9 137 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 OR52E2Q8NGJ4 325 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 CAPSLQ8WWF8 208 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 N4BP2L2Q92802 583 aaPredicted RBP1.21□□□□□ -2.22
PCM1-217ENST00000522998 TCEAL3Q969E4 200 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 C8orf44Q96CB5 159 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 RMI2Q96E14 147 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 RBMXL1Q96E39 390 aaKnown RBP1.21□□□□□ -2.22
PCM1-217ENST00000522998 CHP1Q99653 195 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 HSD17B10Q99714 261 aaKnown RBP1.21□□□□□ -2.22
PCM1-217ENST00000522998 C20orf24Q9BUV8 137 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 TMEM185BQ9H7F4 350 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 NEK6Q9HC98 313 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 ZNF160Q9HCG1 818 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 TRMT112Q9UI30 125 aaKnown RBP1.21□□□□□ -2.22
PCM1-217ENST00000522998 SIGLEC9Q9Y336 463 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 SCN4AP35499 1836 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 LOXHD1Q8IVV2 1947 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 NINLQ9Y2I6 1382 aa1.21□□□□□ -2.22
PCM1-217ENST00000522998 CACNA1DQ01668 2161 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 PRR14LQ5THK1 2151 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 IGHV3-72A0A0B4J1Y9 119 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 IGHV3OR16-9A0A0B4J2B5 98 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 IGKV1-8A0A0C4DH67 115 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 CENPVL3A0A0U1RRI6 287 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 PDZK1P1A8MUH7 402 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 H7C417 338 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 L7N2F9 121 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 EIF3HO15372 352 aaKnown RBP eCLIP1.2□□□□□ -2.22
PCM1-217ENST00000522998 HUS1O60921 280 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 SLC22A5O76082 557 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 EIF4EP06730 217 aaKnown RBP1.2□□□□□ -2.22
PCM1-217ENST00000522998 ZNF688P0C7X2 276 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 MYL2P10916 166 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 OR1E1P30953 314 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 EIF3EP60228 445 aaKnown RBP1.2□□□□□ -2.22
PCM1-217ENST00000522998 RPS15P62841 145 aaKnown RBP1.2□□□□□ -2.22
PCM1-217ENST00000522998 PITPNAQ00169 270 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 CDK5Q00535 292 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 LIPEQ05469 1076 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 TGM3Q08188 693 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 ZNF616Q08AN1 781 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 PSMD5Q16401 504 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 ALKBH6Q3KRA9 238 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 MPV17L2Q567V2 206 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 HSP90AB3PQ58FF7 597 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 RNASE13Q5GAN3 156 aaKnown RBP1.2□□□□□ -2.22
PCM1-217ENST00000522998 SPANXN2Q5MJ10 180 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 AP1ARQ63HQ0 302 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 ADNP2Q6IQ32 1131 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 TTC23LQ6PF05 361 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 SPESP1Q6UW49 350 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 SNX20Q7Z614 316 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 LYPD6BQ8NI32 183 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 TSEN15Q8WW01 171 aaKnown RBP1.2□□□□□ -2.22
PCM1-217ENST00000522998 RTN4IP1Q8WWV3 396 aaPredicted RBP1.2□□□□□ -2.22
PCM1-217ENST00000522998 NRGNQ92686 78 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 SLC25A46Q96AG3 418 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 MCUR1Q96AQ8 359 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 EEF1AKMT3Q96AZ1 226 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 XPO6Q96QU8 1125 aaKnown RBP1.2□□□□□ -2.22
PCM1-217ENST00000522998 FOXC2Q99958 501 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 TIMM29Q9BSF4 260 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 EXOSC4Q9NPD3 245 aaKnown RBP1.2□□□□□ -2.22
PCM1-217ENST00000522998 C8orf17Q9NRJ1 99 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 LYARQ9NX58 379 aaKnown RBP1.2□□□□□ -2.22
PCM1-217ENST00000522998 MTFP1Q9UDX5 166 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 RRP15Q9Y3B9 282 aaKnown RBP1.2□□□□□ -2.22
PCM1-217ENST00000522998 FHOD3Q2V2M9 1422 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 YEATS2Q9ULM3 1422 aa1.2□□□□□ -2.22
PCM1-217ENST00000522998 DYSFO75923 2080 aa1.19□□□□□ -2.22
PCM1-217ENST00000522998 IGHV7-4-1A0A0J9YVY3 117 aa1.19□□□□□ -2.22
PCM1-217ENST00000522998 A0A0J9YXV3 536 aa1.19□□□□□ -2.22
PCM1-217ENST00000522998 A0A1B0GW55 424 aa1.19□□□□□ -2.22
PCM1-217ENST00000522998 SMCO2A6NFE2 343 aa1.19□□□□□ -2.22
PCM1-217ENST00000522998 KRBOX1C9JBD0 128 aa1.19□□□□□ -2.22
PCM1-217ENST00000522998 H7C0C1 242 aa1.19□□□□□ -2.22
PCM1-217ENST00000522998 NVLO15381 856 aaKnown RBP1.19□□□□□ -2.22
PCM1-217ENST00000522998 CHST10O43529 356 aa1.19□□□□□ -2.22
PCM1-217ENST00000522998 RDH16O75452 317 aa1.19□□□□□ -2.22
PCM1-217ENST00000522998 ERLIN1O75477 346 aa1.19□□□□□ -2.22
PCM1-217ENST00000522998 GLSO94925 669 aaPredicted RBP1.19□□□□□ -2.22
PCM1-217ENST00000522998 CDRT1O95170 752 aa1.19□□□□□ -2.22
PCM1-217ENST00000522998 HPRT1P00492 218 aa1.19□□□□□ -2.22
PCM1-217ENST00000522998 IGHV3-11P01762 117 aa1.19□□□□□ -2.22
PCM1-217ENST00000522998 IL4P05112 153 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms