RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 CFAP157Q5JU67 520 aa5.18□□□□□ -1.58
VPS13B-211ENST00000522802 ATPAF1Q5TC12 328 aaPredicted RBP5.18□□□□□ -1.58
VPS13B-211ENST00000522802 IL23RQ5VWK5 629 aa5.18□□□□□ -1.58
VPS13B-211ENST00000522802 GDPGP1Q6ZNW5 385 aa5.18□□□□□ -1.58
VPS13B-211ENST00000522802 Q6ZR03 302 aa5.18□□□□□ -1.58
VPS13B-211ENST00000522802 C1orf122Q6ZSJ8 110 aa5.18□□□□□ -1.58
VPS13B-211ENST00000522802 H1FNTQ75WM6 255 aaPredicted RBP5.18□□□□□ -1.58
VPS13B-211ENST00000522802 PIWIL3Q7Z3Z3 882 aaKnown RBP5.18□□□□□ -1.58
VPS13B-211ENST00000522802 PDZD9Q8IXQ8 264 aa5.18□□□□□ -1.58
VPS13B-211ENST00000522802 KLHDC1Q8N7A1 406 aa5.18□□□□□ -1.58
VPS13B-211ENST00000522802 RBM15BQ8NDT2 890 aaKnown RBP5.18□□□□□ -1.58
VPS13B-211ENST00000522802 SPATA4Q8NEY3 305 aa5.18□□□□□ -1.58
VPS13B-211ENST00000522802 OR2Z1Q8NG97 314 aa5.18□□□□□ -1.58
VPS13B-211ENST00000522802 AGR3Q8TD06 166 aa5.18□□□□□ -1.58
VPS13B-211ENST00000522802 ITLN1Q8WWA0 313 aa5.18□□□□□ -1.58
VPS13B-211ENST00000522802 LRR1Q96L50 414 aa5.18□□□□□ -1.58
VPS13B-211ENST00000522802 C3orf30Q96M34 536 aa5.18□□□□□ -1.58
VPS13B-211ENST00000522802 TRNT1Q96Q11 434 aaKnown RBP5.18□□□□□ -1.58
VPS13B-211ENST00000522802 B9D2Q9BPU9 175 aa5.18□□□□□ -1.58
VPS13B-211ENST00000522802 QTRT1Q9BXR0 403 aaKnown RBP5.18□□□□□ -1.58
VPS13B-211ENST00000522802 DPY30Q9C005 99 aa5.18□□□□□ -1.58
VPS13B-211ENST00000522802 C1orf198Q9H425 327 aa5.18□□□□□ -1.58
VPS13B-211ENST00000522802 RNF121Q9H920 327 aa5.18□□□□□ -1.58
VPS13B-211ENST00000522802 MARCOQ9UEW3 520 aaPredicted RBP5.18□□□□□ -1.58
VPS13B-211ENST00000522802 SAR1BQ9Y6B6 198 aa5.18□□□□□ -1.58
VPS13B-211ENST00000522802 LOC100509620A0A075B734 347 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 A0A087WUJ7 227 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 IGHV3-64DA0A0J9YX35 117 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 LOC102725191A0A1B0GVB3 256 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 EXOC1LA0A1B0GW35 172 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 LRRN3E7EW58 273 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 RRHO14718 337 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 GLRA3O75311 464 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 CYB5R3P00387 301 aaPredicted RBP5.17□□□□□ -1.58
VPS13B-211ENST00000522802 DBIP07108 87 aaKnown RBP5.17□□□□□ -1.58
VPS13B-211ENST00000522802 MMP7P09237 267 aaPredicted RBP5.17□□□□□ -1.58
VPS13B-211ENST00000522802 G6PDP11413 515 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 PRPS1L1P21108 318 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 UQCRC2P22695 453 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 CHI3L1P36222 383 aaPredicted RBP5.17□□□□□ -1.58
VPS13B-211ENST00000522802 PAFAH1B1P43034 410 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 ERFP50548 548 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 EFNB2P52799 333 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 BIDP55957 195 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 BPIFB3P59826 476 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 DNAJB13P59910 316 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 COPZ1P61923 177 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 SSBP2P81877 361 aaPredicted RBP5.17□□□□□ -1.58
VPS13B-211ENST00000522802 KPNB1Q14974 876 aaKnown RBP5.17□□□□□ -1.58
VPS13B-211ENST00000522802 ZNF718Q3SXZ3 478 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 LIN52Q52LA3 116 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 RUNDC3AQ59EK9 446 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 TTMPQ5BVD1 217 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 DEFB121Q5J5C9 76 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 PABPC1L2AQ5JQF8 200 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 FAM201AQ5SY85 155 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 FAM69AQ5T7M9 428 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 SLC35E4Q6ICL7 350 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 SLC27A4Q6P1M0 643 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 TMEM53Q6P2H8 277 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 LYPD2Q6UXB3 125 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 TIFABQ6ZNK6 161 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 LCA5Q86VQ0 697 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 ZNF440Q8IYI8 595 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 CLIP4Q8N3C7 705 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 NATD1Q8N6N6 113 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 FNDC5Q8NAU1 212 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 SCCPDHQ8NBX0 429 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 ADPRHL1Q8NDY3 354 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 ZNF420Q8TAQ5 688 aaPredicted RBP5.17□□□□□ -1.58
VPS13B-211ENST00000522802 OSR1Q8TAX0 266 aaPredicted RBP5.17□□□□□ -1.58
VPS13B-211ENST00000522802 C10orf82Q8WW14 230 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 TMEM54Q969K7 222 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 CCDC126Q96EE4 140 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 SLC41A3Q96GZ6 507 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 NAPGQ99747 312 aaPredicted RBP5.17□□□□□ -1.58
VPS13B-211ENST00000522802 TMEM246Q9BRR3 403 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 SLC35A5Q9BS91 424 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 TRIM15Q9C019 465 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 RAB17Q9H0T7 212 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 CCDC134Q9H6E4 229 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 FN3KRPQ9HA64 309 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 CYSLTR2Q9NS75 346 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 ZNRD1Q9P1U0 126 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 PPP1R3CQ9UQK1 317 aa5.17□□□□□ -1.58
VPS13B-211ENST00000522802 ZNF443Q9Y2A4 671 aaPredicted RBP5.17□□□□□ -1.58
VPS13B-211ENST00000522802 LCE6AA0A183 80 aa5.16□□□□□ -1.58
VPS13B-211ENST00000522802 IQCMA0A1B0GVH7 501 aa5.16□□□□□ -1.58
VPS13B-211ENST00000522802 C5orf49A4QMS7 147 aa5.16□□□□□ -1.58
VPS13B-211ENST00000522802 P2RY10O00398 339 aa5.16□□□□□ -1.58
VPS13B-211ENST00000522802 ENSAO43768 121 aaKnown RBP5.16□□□□□ -1.58
VPS13B-211ENST00000522802 TIMM8AO60220 97 aaPredicted RBP5.16□□□□□ -1.58
VPS13B-211ENST00000522802 LYPLA1O75608 230 aaPredicted RBP5.16□□□□□ -1.58
VPS13B-211ENST00000522802 CPSF4O95639 269 aaKnown RBP5.16□□□□□ -1.58
VPS13B-211ENST00000522802 BGLAPP02818 100 aa5.16□□□□□ -1.58
VPS13B-211ENST00000522802 OPN1SWP03999 348 aa5.16□□□□□ -1.58
VPS13B-211ENST00000522802 NR2F1P10589 423 aa5.16□□□□□ -1.58
VPS13B-211ENST00000522802 STOMP27105 288 aa5.16□□□□□ -1.58
VPS13B-211ENST00000522802 HTR2AP28223 471 aa5.16□□□□□ -1.58
VPS13B-211ENST00000522802 APLNRP35414 380 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms