RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 LIPAP38571 399 aa11.62□□□□□ -0.55
CLK4-210ENST00000522136 RPL5P46777 297 aaKnown RBP11.62□□□□□ -0.55
CLK4-210ENST00000522136 CX3CR1P49238 355 aa11.62□□□□□ -0.55
CLK4-210ENST00000522136 ZNF121P58317 390 aaPredicted RBP11.62□□□□□ -0.55
CLK4-210ENST00000522136 TFF3Q07654 80 aa11.62□□□□□ -0.55
CLK4-210ENST00000522136 BLMHQ13867 455 aa11.62□□□□□ -0.55
CLK4-210ENST00000522136 ODF4Q2M2E3 257 aa11.62□□□□□ -0.55
CLK4-210ENST00000522136 LIPKQ5VXJ0 399 aa11.62□□□□□ -0.55
CLK4-210ENST00000522136 ARL9Q6T311 187 aa11.62□□□□□ -0.55
CLK4-210ENST00000522136 P2RY8Q86VZ1 359 aa11.62□□□□□ -0.55
CLK4-210ENST00000522136 PRSS35Q8N3Z0 413 aa11.62□□□□□ -0.55
CLK4-210ENST00000522136 PAQR4Q8N4S7 273 aaPredicted RBP11.62□□□□□ -0.55
CLK4-210ENST00000522136 OR2G2Q8NGZ5 317 aa11.62□□□□□ -0.55
CLK4-210ENST00000522136 ZNF799Q96GE5 643 aa11.62□□□□□ -0.55
CLK4-210ENST00000522136 POM121L2Q96KW2 1035 aa11.62□□□□□ -0.55
CLK4-210ENST00000522136 MYCBPQ99417 103 aaPredicted RBP11.62□□□□□ -0.55
CLK4-210ENST00000522136 TRIM36Q9NQ86 728 aa11.62□□□□□ -0.55
CLK4-210ENST00000522136 NPAP1Q9NZP6 1156 aa11.62□□□□□ -0.55
CLK4-210ENST00000522136 FRRS1LQ9P0K9 344 aa11.62□□□□□ -0.55
CLK4-210ENST00000522136 R4GMQ9 66 aa11.62□□□□□ -0.55
CLK4-210ENST00000522136 TMEM269A0A1B0GVZ9 245 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 IGKV3-15P01624 115 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 THBDP07204 575 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 ACSM4P0C7M7 580 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 KIR3DL2P43630 455 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 SLC6A9P48067 706 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 SLC3A1Q07837 685 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 ACSM1Q08AH1 577 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 ECH1Q13011 328 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 MLLT11Q13015 90 aaPredicted RBP11.61□□□□□ -0.55
CLK4-210ENST00000522136 SSX1Q16384 188 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 KRTAP27-1Q3LI81 207 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 WDR38Q5JTN6 314 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 SEZ6L2Q6UXD5 910 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 SATL1Q86VE3 508 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 SLC30A7Q8NEW0 376 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 SPTSSAQ969W0 71 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 FAM206AQ9NX38 181 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 ZNF319Q9P2F9 582 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 CADP27708 2225 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 IGHV1-18A0A0C4DH31 117 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 TRBV2A0A0J9YWF9 115 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 LOC110117498-PIK3R3F6TDL0 507 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 H3BSH0 61 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 OGG1O15527 345 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 ANXA2P07355 339 aaKnown RBP11.61□□□□□ -0.55
CLK4-210ENST00000522136 CECR9P0C854 216 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 COX5BP10606 129 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 AGAP20933 346 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 APLNRP35414 380 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 GDI2P50395 445 aaKnown RBP11.61□□□□□ -0.55
CLK4-210ENST00000522136 PSMA6P60900 246 aaKnown RBP11.61□□□□□ -0.55
CLK4-210ENST00000522136 SRSF1Q07955 248 aaKnown RBP eCLIP11.61□□□□□ -0.55
CLK4-210ENST00000522136 ALKBH1Q13686 389 aaKnown RBP11.61□□□□□ -0.55
CLK4-210ENST00000522136 CDK5R1Q15078 307 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 FAM57BQ71RH2 274 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 PRSS45Q7RTY3 260 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 WFDC8Q8IUA0 241 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 PHC2Q8IXK0 858 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 IL17RDQ8NFM7 739 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 LINC01560Q8TB33 94 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 DOK1Q99704 481 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 PDCD1LG2Q9BQ51 273 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 NIPAL2Q9H841 368 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 ISYNA1Q9NPH2 558 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 G6PC2Q9NQR9 355 aa11.61□□□□□ -0.55
CLK4-210ENST00000522136 NPDC1Q9NQX5 325 aaPredicted RBP11.61□□□□□ -0.55
CLK4-210ENST00000522136 M0R1B8 84 aa11.6□□□□□ -0.55
CLK4-210ENST00000522136 IGLV1-44P01699 117 aa11.6□□□□□ -0.55
CLK4-210ENST00000522136 CPEP16870 476 aa11.6□□□□□ -0.55
CLK4-210ENST00000522136 DCTDP32321 178 aa11.6□□□□□ -0.55
CLK4-210ENST00000522136 TGM4P49221 684 aa11.6□□□□□ -0.55
CLK4-210ENST00000522136 MMP16P51512 607 aa11.6□□□□□ -0.55
CLK4-210ENST00000522136 TPTEP56180 551 aa11.6□□□□□ -0.55
CLK4-210ENST00000522136 BDH1Q02338 343 aa11.6□□□□□ -0.55
CLK4-210ENST00000522136 TPBGQ13641 420 aa11.6□□□□□ -0.55
CLK4-210ENST00000522136 ZNF829Q3KNS6 432 aaPredicted RBP11.6□□□□□ -0.55
CLK4-210ENST00000522136 DMKNQ6E0U4 476 aaPredicted RBP11.6□□□□□ -0.55
CLK4-210ENST00000522136 FDX2Q6P4F2 183 aa11.6□□□□□ -0.55
CLK4-210ENST00000522136 RPL22L1Q6P5R6 122 aaKnown RBP11.6□□□□□ -0.55
CLK4-210ENST00000522136 CATSPERDQ86XM0 798 aa11.6□□□□□ -0.55
CLK4-210ENST00000522136 EGFL6Q8IUX8 553 aa11.6□□□□□ -0.55
CLK4-210ENST00000522136 RDH10Q8IZV5 341 aa11.6□□□□□ -0.55
CLK4-210ENST00000522136 OR13F1Q8NGS4 319 aa11.6□□□□□ -0.55
CLK4-210ENST00000522136 TMEM203Q969S6 136 aa11.6□□□□□ -0.55
CLK4-210ENST00000522136 C4orf45Q96LM5 186 aa11.6□□□□□ -0.55
CLK4-210ENST00000522136 MED18Q9BUE0 208 aa11.6□□□□□ -0.55
CLK4-210ENST00000522136 CRNNQ9UBG3 495 aaPredicted RBP11.6□□□□□ -0.55
CLK4-210ENST00000522136 ATPIF1Q9UII2 106 aa11.6□□□□□ -0.55
CLK4-210ENST00000522136 OR52A1Q9UKL2 312 aa11.6□□□□□ -0.55
CLK4-210ENST00000522136 OR4C45A6NMZ5 311 aa11.59□□□□□ -0.55
CLK4-210ENST00000522136 ZFPL1O95159 310 aa11.59□□□□□ -0.55
CLK4-210ENST00000522136 TGFBR2P37173 567 aa11.59□□□□□ -0.55
CLK4-210ENST00000522136 RGS6P49758 472 aa11.59□□□□□ -0.55
CLK4-210ENST00000522136 TAS2R43P59537 309 aa11.59□□□□□ -0.55
CLK4-210ENST00000522136 SNAI3Q3KNW1 292 aa11.59□□□□□ -0.55
CLK4-210ENST00000522136 CCDC58Q4VC31 144 aa11.59□□□□□ -0.55
CLK4-210ENST00000522136 RPS4Y2Q8TD47 263 aa11.59□□□□□ -0.55
CLK4-210ENST00000522136 UFD1Q92890 307 aa11.59□□□□□ -0.55
CLK4-210ENST00000522136 LRRC46Q96FV0 321 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms