RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 RP2O75695 350 aa17.57■□□□□ 0.4
TRIM35-203ENST00000521253 IGHV4-31P0DP07 118 aa17.57■□□□□ 0.4
TRIM35-203ENST00000521253 FCGR1AP12314 374 aa17.57■□□□□ 0.4
TRIM35-203ENST00000521253 ZNF23P17027 643 aa17.57■□□□□ 0.4
TRIM35-203ENST00000521253 KITLGP21583 273 aa17.57■□□□□ 0.4
TRIM35-203ENST00000521253 PAICSP22234 425 aaKnown RBP17.57■□□□□ 0.4
TRIM35-203ENST00000521253 TRIP10Q15642 601 aa17.57■□□□□ 0.4
TRIM35-203ENST00000521253 TEX30Q5JUR7 227 aa17.57■□□□□ 0.4
TRIM35-203ENST00000521253 FAM209AQ5JX71 171 aa17.57■□□□□ 0.4
TRIM35-203ENST00000521253 PLBD1Q6P4A8 553 aa17.57■□□□□ 0.4
TRIM35-203ENST00000521253 COLCA1Q6ZS62 124 aa17.57■□□□□ 0.4
TRIM35-203ENST00000521253 PARP8Q8N3A8 854 aa17.57■□□□□ 0.4
TRIM35-203ENST00000521253 HAVCR1Q96D42 359 aa17.57■□□□□ 0.4
TRIM35-203ENST00000521253 POM121Q96HA1 1249 aa17.57■□□□□ 0.4
TRIM35-203ENST00000521253 C1QTNF5Q9BXJ0 243 aa17.57■□□□□ 0.4
TRIM35-203ENST00000521253 OR51V1Q9H2C8 321 aa17.57■□□□□ 0.4
TRIM35-203ENST00000521253 SLC25A19Q9HC21 320 aa17.57■□□□□ 0.4
TRIM35-203ENST00000521253 ZNF275Q9NSD4 429 aaPredicted RBP17.57■□□□□ 0.4
TRIM35-203ENST00000521253 DECR2Q9NUI1 292 aa17.57■□□□□ 0.4
TRIM35-203ENST00000521253 DDX28Q9NUL7 540 aaKnown RBP17.57■□□□□ 0.4
TRIM35-203ENST00000521253 LRP5LA4QPB2 252 aa17.56■□□□□ 0.4
TRIM35-203ENST00000521253 PRR23D1E9PI22 279 aaPredicted RBP17.56■□□□□ 0.4
TRIM35-203ENST00000521253 EBAG9O00559 213 aa17.56■□□□□ 0.4
TRIM35-203ENST00000521253 TPD52L2O43399 206 aaKnown RBP17.56■□□□□ 0.4
TRIM35-203ENST00000521253 TLX2O43763 284 aaPredicted RBP17.56■□□□□ 0.4
TRIM35-203ENST00000521253 CDC14BO60729 498 aa17.56■□□□□ 0.4
TRIM35-203ENST00000521253 LILRA1O75019 489 aa17.56■□□□□ 0.4
TRIM35-203ENST00000521253 GLCEO94923 617 aa17.56■□□□□ 0.4
TRIM35-203ENST00000521253 ADH4P08319 380 aa17.56■□□□□ 0.4
TRIM35-203ENST00000521253 TACSTD2P09758 323 aa17.56■□□□□ 0.4
TRIM35-203ENST00000521253 PRR23D2P0DMB1 279 aaPredicted RBP17.56■□□□□ 0.4
TRIM35-203ENST00000521253 RAC2P15153 192 aa17.56■□□□□ 0.4
TRIM35-203ENST00000521253 CRISP1P54107 249 aa17.56■□□□□ 0.4
TRIM35-203ENST00000521253 PPP2R2BQ00005 443 aa17.56■□□□□ 0.4
TRIM35-203ENST00000521253 ZMAT1Q5H9K5 638 aa17.56■□□□□ 0.4
TRIM35-203ENST00000521253 FBXW12Q6X9E4 464 aa17.56■□□□□ 0.4
TRIM35-203ENST00000521253 NAA40Q86UY6 237 aa17.56■□□□□ 0.4
TRIM35-203ENST00000521253 SAP30LQ9HAJ7 183 aa17.56■□□□□ 0.4
TRIM35-203ENST00000521253 YAE1D1Q9NRH1 226 aa17.56■□□□□ 0.4
TRIM35-203ENST00000521253 ZDHHC8Q9ULC8 765 aa17.56■□□□□ 0.4
TRIM35-203ENST00000521253 MITFO75030 526 aaPredicted RBP17.55■□□□□ 0.4
TRIM35-203ENST00000521253 GSTT1P30711 240 aa17.55■□□□□ 0.4
TRIM35-203ENST00000521253 CRYBB2P43320 205 aa17.55■□□□□ 0.4
TRIM35-203ENST00000521253 GPR6P46095 362 aaPredicted RBP17.55■□□□□ 0.4
TRIM35-203ENST00000521253 TPTEP56180 551 aa17.55■□□□□ 0.4
TRIM35-203ENST00000521253 TMEM33P57088 247 aa17.55■□□□□ 0.4
TRIM35-203ENST00000521253 C6orf52Q5T4I8 152 aa17.55■□□□□ 0.4
TRIM35-203ENST00000521253 Q6ZR03 302 aa17.55■□□□□ 0.4
TRIM35-203ENST00000521253 USP51Q70EK9 711 aa17.55■□□□□ 0.4
TRIM35-203ENST00000521253 ZDHHC13Q8IUH4 622 aa17.55■□□□□ 0.4
TRIM35-203ENST00000521253 ERI1Q8IV48 349 aaKnown RBP17.55■□□□□ 0.4
TRIM35-203ENST00000521253 CPOQ8IVL8 374 aa17.55■□□□□ 0.4
TRIM35-203ENST00000521253 ST7LQ8TDW4 575 aa17.55■□□□□ 0.4
TRIM35-203ENST00000521253 SPTSSAQ969W0 71 aa17.55■□□□□ 0.4
TRIM35-203ENST00000521253 SLAMF6Q96DU3 332 aa17.55■□□□□ 0.4
TRIM35-203ENST00000521253 PLEKHA8Q96JA3 519 aa17.55■□□□□ 0.4
TRIM35-203ENST00000521253 INTS14Q96SY0 518 aa17.55■□□□□ 0.4
TRIM35-203ENST00000521253 TEX12Q9BXU0 123 aa17.55■□□□□ 0.4
TRIM35-203ENST00000521253 GABARAPL1Q9H0R8 117 aa17.55■□□□□ 0.4
TRIM35-203ENST00000521253 SEMA6AQ9H2E6 1030 aa17.55■□□□□ 0.4
TRIM35-203ENST00000521253 KRT84Q9NSB2 600 aa17.55■□□□□ 0.4
TRIM35-203ENST00000521253 IGHV1-69-2A0A0G2JMI3 117 aa17.54■□□□□ 0.4
TRIM35-203ENST00000521253 M0R135 149 aa17.54■□□□□ 0.4
TRIM35-203ENST00000521253 LCATP04180 440 aa17.54■□□□□ 0.4
TRIM35-203ENST00000521253 OTX1P32242 354 aaPredicted RBP17.54■□□□□ 0.4
TRIM35-203ENST00000521253 GZMKP49863 264 aa17.54■□□□□ 0.4
TRIM35-203ENST00000521253 CHN2P52757 468 aa17.54■□□□□ 0.4
TRIM35-203ENST00000521253 ACTR3P61158 418 aa17.54■□□□□ 0.4
TRIM35-203ENST00000521253 CDK5R2Q13319 367 aa17.54■□□□□ 0.4
TRIM35-203ENST00000521253 KPNB1Q14974 876 aaKnown RBP17.54■□□□□ 0.4
TRIM35-203ENST00000521253 CYB5R2Q6BCY4 276 aa17.54■□□□□ 0.4
TRIM35-203ENST00000521253 OR2T2Q6IF00 324 aa17.54■□□□□ 0.4
TRIM35-203ENST00000521253 DPY19L4Q7Z388 723 aa17.54■□□□□ 0.4
TRIM35-203ENST00000521253 TIGD4Q8IY51 512 aa17.54■□□□□ 0.4
TRIM35-203ENST00000521253 OR5AS1Q8N127 324 aa17.54■□□□□ 0.4
TRIM35-203ENST00000521253 BBS1Q8NFJ9 593 aa17.54■□□□□ 0.4
TRIM35-203ENST00000521253 PYDC1Q8WXC3 89 aa17.54■□□□□ 0.4
TRIM35-203ENST00000521253 ZMYND19Q96E35 227 aaPredicted RBP17.54■□□□□ 0.4
TRIM35-203ENST00000521253 ZNF799Q96GE5 643 aa17.54■□□□□ 0.4
TRIM35-203ENST00000521253 DIRC2Q96SL1 478 aa17.54■□□□□ 0.4
TRIM35-203ENST00000521253 COPS4Q9BT78 406 aa17.54■□□□□ 0.4
TRIM35-203ENST00000521253 MARCH7Q9H992 704 aa17.54■□□□□ 0.4
TRIM35-203ENST00000521253 CENPMQ9NSP4 180 aa17.54■□□□□ 0.4
TRIM35-203ENST00000521253 TVP23BQ9NYZ1 205 aa17.54■□□□□ 0.4
TRIM35-203ENST00000521253 CACNG2Q9Y698 323 aa17.54■□□□□ 0.4
TRIM35-203ENST00000521253 PPIHO43447 177 aaKnown RBP17.53■□□□□ 0.4
TRIM35-203ENST00000521253 CD55P08174 381 aa17.53■□□□□ 0.4
TRIM35-203ENST00000521253 ZNF16P17020 682 aaPredicted RBP17.53■□□□□ 0.4
TRIM35-203ENST00000521253 IL2RGP31785 369 aa17.53■□□□□ 0.4
TRIM35-203ENST00000521253 ESRRGP62508 458 aa17.53■□□□□ 0.4
TRIM35-203ENST00000521253 EIF2B1Q14232 305 aaKnown RBP17.53■□□□□ 0.4
TRIM35-203ENST00000521253 PTGES3Q15185 160 aaKnown RBP17.53■□□□□ 0.4
TRIM35-203ENST00000521253 SNAPC1Q16533 368 aa17.53■□□□□ 0.4
TRIM35-203ENST00000521253 KLHL12Q53G59 568 aa17.53■□□□□ 0.4
TRIM35-203ENST00000521253 SPRNQ5BIV9 151 aa17.53■□□□□ 0.4
TRIM35-203ENST00000521253 KDM4DQ6B0I6 523 aa17.53■□□□□ 0.4
TRIM35-203ENST00000521253 SPATC1Q76KD6 591 aa17.53■□□□□ 0.4
TRIM35-203ENST00000521253 OR6N2Q8NGY6 317 aa17.53■□□□□ 0.4
TRIM35-203ENST00000521253 CENPNQ96H22 339 aaPredicted RBP17.53■□□□□ 0.4
TRIM35-203ENST00000521253 SOX7Q9BT81 388 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms