RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 NPIPA8P0DM63 369 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 TDGF1P13385 188 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 RNH1P13489 461 aaKnown RBP3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 NT5EP21589 574 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 MMP11P24347 488 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 RAD52P43351 418 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 MAP2K4P45985 399 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 OMPP47874 163 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 CXCL12P48061 93 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 IDH2P48735 452 aaKnown RBP3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 ZNF136P52737 540 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 CRISP1P54107 249 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 UGT2B15P54855 530 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 TMBIM6P55061 237 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 SH3BGRP55822 239 aaPredicted RBP3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 SMIM11AP58511 58 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 IGLV3-21P80748 117 aaPredicted RBP3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 HPCAP84074 193 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 EMX1Q04741 257 aaPredicted RBP3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 SRSF9Q13242 221 aaKnown RBP eCLIP3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 EXOSC7Q15024 291 aaKnown RBP3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 PTGES3Q15185 160 aaKnown RBP3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 MAPK14Q16539 360 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 NDUFA9Q16795 377 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 ZNF311Q5JNZ3 666 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 DCST2Q5T1A1 773 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 CCNJQ5T5M9 372 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 MLIPQ5VWP3 458 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 SLX4IPQ5VYV7 408 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 TMEM236Q5W0B7 351 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 ZCCHC12Q6PEW1 402 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 BAIAP2L2Q6UXY1 529 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 ZNF836Q6ZNA1 936 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 AHSA2Q719I0 299 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 PRSS48Q7RTY5 328 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 ERI1Q8IV48 349 aaKnown RBP3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 UBALD2Q8IYN6 164 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 ZNF619Q8N2I2 560 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 CDRT4Q8N9R6 151 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 ZNF540Q8NDQ6 660 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 OR4K5Q8NGD3 323 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 OR6C4Q8NGE1 309 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 OR52R1Q8NGF1 315 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 OR52P1PQ8NH57 321 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 RHOXF1Q8NHV9 184 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 TGM7Q96PF1 710 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 STACQ99469 402 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 SDF2Q99470 211 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 GPA33Q99795 319 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 FUNDC2Q9BWH2 189 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 UCK2Q9BZX2 261 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 CCDC90BQ9GZT6 254 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 CHRNA10Q9GZZ6 450 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 PIGUQ9H490 435 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 FOLH1BQ9HBA9 442 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 VCX3AQ9NNX9 186 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 CCNB1IP1Q9NPC3 277 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 ADAP2Q9NPF8 381 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 ACOT13Q9NPJ3 140 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 CTPS2Q9NRF8 586 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 SOHLH2Q9NX45 425 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 IMPAD1Q9NX62 359 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 SCN3BQ9NY72 215 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 ENOPH1Q9UHY7 261 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 PSORS1C1Q9UIG5 152 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 ENPP5Q9UJA9 477 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 ELF5Q9UKW6 265 aaPredicted RBP3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 TMCC3Q9ULS5 477 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 PLCL2Q9UPR0 1127 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 SATB2Q9UPW6 733 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 NTNG1Q9Y2I2 539 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 IFT52Q9Y366 437 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 WDR45Q9Y484 360 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 SNX5Q9Y5X3 404 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 MN1Q10571 1320 aaPredicted RBP3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 UNC13CQ8NB66 2214 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 ASXL3Q9C0F0 2248 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 KNL1Q8NG31 2342 aa3.09□□□□□ -1.92
CTHRC1-204ENST00000520880 KMT2EQ8IZD2 1858 aa3.08□□□□□ -1.92
CTHRC1-204ENST00000520880 COL6A3P12111 3177 aa3.08□□□□□ -1.92
CTHRC1-204ENST00000520880 A0A087WUU8 490 aa3.08□□□□□ -1.92
CTHRC1-204ENST00000520880 A0A1W2PPK0 400 aa3.08□□□□□ -1.92
CTHRC1-204ENST00000520880 A0A1W2PPW3 197 aa3.08□□□□□ -1.92
CTHRC1-204ENST00000520880 ZNF749O43361 778 aa3.08□□□□□ -1.92
CTHRC1-204ENST00000520880 ADAM20O43506 726 aa3.08□□□□□ -1.92
CTHRC1-204ENST00000520880 NUDT21O43809 227 aaKnown RBP3.08□□□□□ -1.92
CTHRC1-204ENST00000520880 DUX1O43812 170 aa3.08□□□□□ -1.92
CTHRC1-204ENST00000520880 MPZL2O60487 215 aa3.08□□□□□ -1.92
CTHRC1-204ENST00000520880 CTNSO60931 367 aa3.08□□□□□ -1.92
CTHRC1-204ENST00000520880 NOL3O60936 208 aaKnown RBP3.08□□□□□ -1.92
CTHRC1-204ENST00000520880 STX11O75558 287 aa3.08□□□□□ -1.92
CTHRC1-204ENST00000520880 KCNK2O95069 426 aa3.08□□□□□ -1.92
CTHRC1-204ENST00000520880 GABARAPO95166 117 aa3.08□□□□□ -1.92
CTHRC1-204ENST00000520880 OR5F1O95221 314 aa3.08□□□□□ -1.92
CTHRC1-204ENST00000520880 LYPD3O95274 346 aa3.08□□□□□ -1.92
CTHRC1-204ENST00000520880 AK1P00568 194 aa3.08□□□□□ -1.92
CTHRC1-204ENST00000520880 IGKV1D-16P01601 117 aa3.08□□□□□ -1.92
CTHRC1-204ENST00000520880 CLPSP04118 112 aa3.08□□□□□ -1.92
CTHRC1-204ENST00000520880 CDK1P06493 297 aa3.08□□□□□ -1.92
CTHRC1-204ENST00000520880 DBIP07108 87 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms