RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 CCINQ13939 588 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 ZNF528Q3MIS6 628 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 RPL7L1Q6DKI1 246 aaKnown RBP11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 FAM160A2Q8N612 972 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 BAHD1Q8TBE0 780 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 RNF128Q8TEB7 428 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 SEC11CQ9BY50 192 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 CHRDQ9H2X0 955 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 SLC17A5Q9NRA2 495 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 PRODH2Q9UF12 536 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 MIOXQ9UGB7 285 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 TEX13DA0A0J9YY54 714 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 A0A1B0GTI1 187 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 MSGN1A6NI15 193 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 UTS2O95399 124 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 AHSA1O95433 338 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 CT45A8P0DMV1 189 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 CT45A9P0DMV2 189 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 SMIM10L1P0DMW3 83 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 F2RL1P55085 397 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 CT45A2Q5DJT8 189 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 Q6ZRG5 221 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 ANGPTL5Q86XS5 388 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 OR4A4PQ8NGN8 299 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 OR5H2Q8NGV7 314 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 OR51F2Q8NH61 342 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 SLC22A8Q8TCC7 542 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 RSC1A1Q92681 617 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 TM4SF19Q96DZ7 209 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 SMIM10Q96HG1 83 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 OR11A1Q9GZK7 315 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 C1orf198Q9H425 327 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 FAM60AQ9NP50 221 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 RAB22AQ9UL26 194 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 MED12Q93074 2177 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 ICOSLGO75144 302 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 ABCD3P28288 659 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 RAB32Q13637 225 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 SECTM1Q8WVN6 248 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 ASB16Q96NS5 453 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 LPAR3Q9UBY5 353 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 GDF2Q9UK05 429 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 YBX2Q9Y2T7 364 aaKnown RBP11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 MEMO1Q9Y316 297 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 WIF1Q9Y5W5 379 aa11.51□□□□□ -0.57
TRAPPC9-208ENST00000520857 PRSS37A4D1T9 235 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 NPIPA5E9PKD4 350 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 DUS4LO95620 317 aaKnown RBP11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 GIMD1P0DJR0 217 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 HOXB2P14652 356 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 RCC1P18754 421 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 RBMXP38159 391 aaKnown RBP11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 TAS2R31P59538 309 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 LINC00114Q6XXX2 140 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 ATG4DQ86TL0 474 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 ZSCAN4Q8NAM6 433 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 OR5D18Q8NGL1 313 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 OR6S1Q8NH40 331 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 CNTD2Q9H8S5 307 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 FN3KRPQ9HA64 309 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 ZNF701Q9NV72 531 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 TBX21Q9UL17 535 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 NPIPA1Q9UND3 350 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 XIRP2A4UGR9 3374 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 NME2P1O60361 137 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 PET100P0DJ07 73 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 SLC2A1P11166 492 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 RPS4XP62701 263 aaKnown RBP11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 CSNK2A1P68400 391 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 TOMM34Q15785 309 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 ISXQ2M1V0 245 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 ZNF704Q6ZNC4 412 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 TMPRSS9Q7Z410 1059 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 LINC00469Q8N7U9 141 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 CSNK2A3Q8NEV1 391 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 SPPL3Q8TCT6 385 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 SP7Q8TDD2 431 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 NUP210Q8TEM1 1887 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 TCTEX1D2Q8WW35 142 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 CTHRC1Q96CG8 243 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 RRNAD1Q96FB5 475 aaKnown RBP11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 CDC6Q99741 560 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 NXF5Q9H1B4 397 aaKnown RBP11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 OR5AC2Q9NZP5 309 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 MED19A0JLT2 244 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 A6NLC8 198 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 CCL5P13501 91 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 GPM6BQ13491 265 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 TMEM244Q5VVB8 128 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 TTLL10Q6ZVT0 673 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 OR52N4Q8NGI2 321 aa11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 FAM71F1Q96KD3 344 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC9-208ENST00000520857 hCG_1809904A0A1W2PP81 198 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 A0A1W2PR64 198 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 A0A1W2PRV1 198 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 PQLC2LA1A4F0 135 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 OR5K4A6NMS3 321 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 METTL12A8MUP2 240 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 EFSO43281 561 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 CRTAPO75718 401 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms