RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 ZBTB46Q86UZ6 589 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 DHFR2Q86XF0 187 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 ZNF565Q8N9K5 539 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 NPEPL1Q8NDH3 523 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 OR1F12Q8NHA8 337 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 CLDND2Q8NHS1 167 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 ANGPTL6Q8NI99 470 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 ABHD4Q8TB40 342 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 SLC7A6Q92536 515 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 PTP4A1Q93096 173 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 HAVCR1Q96D42 359 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 SNX18Q96RF0 628 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 BEX2Q9BXY8 128 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 TRIM15Q9C019 465 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 NDEL1Q9GZM8 345 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 C1orf21Q9H246 121 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 POFUT1Q9H488 388 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 KRCC1Q9NPI7 259 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-215ENST00000519474 ARMC1Q9NVT9 282 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 VNN3Q9NY84 501 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 EXTL2Q9UBQ6 330 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 CDC42EP3Q9UKI2 254 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 GRIP1Q9Y3R0 1128 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 TLN2Q9Y4G6 2542 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 NF1P21359 2839 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 OR6C6A6NF89 314 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 ACOT8O14734 319 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 PPIHO43447 177 aaKnown RBP7.94□□□□□ -1.14
HDAC3-215ENST00000519474 SPRY3O43610 288 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 ADH4P08319 380 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 DBHP09172 617 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 TMEM11P17152 192 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 TUBG1P23258 451 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 RBMXP38159 391 aaKnown RBP7.94□□□□□ -1.14
HDAC3-215ENST00000519474 IFNGR2P38484 337 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 ARHGDIAP52565 204 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 TEKQ02763 1124 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 GLO1Q04760 184 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 SCRN3Q0VDG4 424 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 CDK5R2Q13319 367 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 AQP6Q13520 282 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 ZNF124Q15973 351 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 PCGF3Q3KNV8 242 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 CDONQ4KMG0 1287 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 FAM120AOSQ5T036 256 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 LCN8Q6JVE9 175 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 FAM122CQ6P4D5 195 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 LEG1Q6P5S2 330 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 ARL9Q6T311 187 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 RFPL4BQ6ZWI9 263 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 NAA40Q86UY6 237 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 LINC01356Q8N9X3 169 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 OR9Q2Q8NGE9 314 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 OR52E2Q8NGJ4 325 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 ZNRF4Q8WWF5 429 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 CMBLQ96DG6 245 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 CLPTM1LQ96KA5 538 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 BTBD10Q9BSF8 475 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 IFT27Q9BW83 186 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 SHARPINQ9H0F6 387 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 MAGIXQ9H6Y5 334 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 EGLN3Q9H6Z9 239 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 TUBG2Q9NRH3 451 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 DECR2Q9NUI1 292 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 PLEK2Q9NYT0 353 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 TREM2Q9NZC2 230 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 ASH2LQ9UBL3 628 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 NDRG4Q9ULP0 352 aaKnown RBP7.94□□□□□ -1.14
HDAC3-215ENST00000519474 KCNS2Q9ULS6 477 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 CBY1Q9Y3M2 126 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 LHFPL6Q9Y693 200 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 CACNG2Q9Y698 323 aa7.94□□□□□ -1.14
HDAC3-215ENST00000519474 ZANQ9Y493 2812 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 IGHV1-69-2A0A0G2JMI3 117 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 ZSCAN5BA6NJL1 495 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 SNTNA6NMZ2 147 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 FAM157AC9JC47 383 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 BHLHE40O14503 412 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 DOK2O60496 412 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 UBOX5O94941 541 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 ABHD16AO95870 558 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 RENP00797 406 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 IFNA2P01563 188 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 S100A9P06702 114 aaKnown RBP7.93□□□□□ -1.14
HDAC3-215ENST00000519474 GSTT2P0CG29 244 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 GSTT2BP0CG30 244 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 GAAP10253 952 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 LIPAP38571 399 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 HTR5AP47898 357 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 CDH15P55291 814 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 RIPK1Q13546 671 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 CCNIQ14094 377 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 MICAQ29983 383 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 CR1LQ2VPA4 569 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 MTX3Q5HYI7 312 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 OR2T5Q6IEZ7 315 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 LIN54Q6MZP7 749 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 PGM2L1Q6PCE3 622 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 ZNF620Q6ZNG0 422 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 Q6ZR03 302 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms