RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 ANKHQ9HCJ1 492 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 PLSCR3Q9NRY6 295 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 DDX19AQ9NUU7 478 aaKnown RBP2.54□□□□□ -2
VPS13B-207ENST00000518569 RHBDL2Q9NX52 303 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 TAS2R9Q9NYW1 312 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 MYEF2Q9P2K5 600 aaKnown RBP2.54□□□□□ -2
VPS13B-207ENST00000518569 GNG12Q9UBI6 72 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 ERGIC3Q9Y282 383 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 POFUT2Q9Y2G5 429 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 MEMO1Q9Y316 297 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.54□□□□□ -2
VPS13B-207ENST00000518569 SAMD9LQ8IVG5 1584 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 INO80Q9ULG1 1556 aaPredicted RBP2.53□□□□□ -2
VPS13B-207ENST00000518569 ATP7AQ04656 1500 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 MAP3K1Q13233 1512 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 SYCP2Q9BX26 1530 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 LRRC9Q6ZRR7 1453 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 CDK12Q9NYV4 1490 aaPredicted RBP2.53□□□□□ -2
VPS13B-207ENST00000518569 ATP10DQ9P241 1426 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 JCADQ9P266 1359 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 ZNF532Q9HCE3 1301 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 IGHV1OR15-1A0A075B7D0 117 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 SMIM28A0A1B0GU29 152 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 PP2D1A8MPX8 630 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 H3BNH8 94 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 ACOX3O15254 700 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 AQP9O43315 295 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 B3GAT3O94766 335 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 IGLV1-47P01700 117 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 IGF1P05019 195 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 ALDOBP05062 364 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 PSKH1P11801 424 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 ATP1B2P14415 290 aaPredicted RBP2.53□□□□□ -2
VPS13B-207ENST00000518569 NCK1P16333 377 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 VDAC1P21796 283 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 CXCR2P25025 360 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 SERPINB1P30740 379 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 NTSP30990 170 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 AQP2P41181 271 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 MAP3K8P41279 467 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 MAGEA12P43365 314 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 BDKRB1P46663 353 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 CCR8P51685 355 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 ATP1B3P54709 279 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 MLF1P58340 268 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 ACTBP60709 375 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 CXCR4P61073 352 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 ACTA2P62736 377 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 ACTG1P63261 375 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 ACTG2P63267 376 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 ACTC1P68032 377 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 ACTA1P68133 377 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 EGFEM1PQ0D2K5 195 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 ST3GAL3Q11203 375 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 ILKQ13418 452 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 PON3Q15166 354 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 EXOC3L4Q17RC7 722 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 CHRFAM7AQ494W8 412 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 C2orf83Q53S99 150 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 TEX30Q5JUR7 227 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 SAMD4BQ5PRF9 694 aaKnown RBP2.53□□□□□ -2
VPS13B-207ENST00000518569 BEND3Q5T5X7 828 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 HES5Q5TA89 166 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 LIPNQ5VXI9 398 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 C22orf42Q6IC83 251 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 LRRN1Q6UXK5 716 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 PGAP1Q75T13 922 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 COX15Q7KZN9 410 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 SLC16A14Q7RTX9 510 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 APTXQ7Z2E3 356 aaKnown RBP2.53□□□□□ -2
VPS13B-207ENST00000518569 HDDC2Q7Z4H3 204 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 MOB3BQ86TA1 216 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 TMEM17Q86X19 198 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 HORMAD1Q86X24 394 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 APRG1Q8IVJ8 170 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 SKA3Q8IX90 412 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 CYP4Z2PQ8N1L4 340 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 MTURNQ8N3F0 131 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 CCDC71LQ8N9Z2 235 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 CATSPER1Q8NEC5 780 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 NUBPLQ8TB37 319 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 CNIH3Q8TBE1 160 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 CA5BP1Q8WTZ4 195 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 IFT81Q8WYA0 676 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 MYDGFQ969H8 173 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 ZNF414Q96IQ9 312 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 TSSK3Q96PN8 268 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 XPO6Q96QU8 1125 aaKnown RBP2.53□□□□□ -2
VPS13B-207ENST00000518569 PRRT1Q99946 306 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 NICN1Q9BSH3 213 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 RACGAP1Q9H0H5 632 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 LHX5Q9H2C1 402 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 RHOJQ9H4E5 214 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 ISG20L2Q9H9L3 353 aaKnown RBP2.53□□□□□ -2
VPS13B-207ENST00000518569 HRASLSQ9HDD0 168 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 ASCL3Q9NQ33 180 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 DIABLOQ9NR28 239 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 PAK1IP1Q9NWT1 392 aaPredicted RBP2.53□□□□□ -2
VPS13B-207ENST00000518569 MRM2Q9UI43 246 aaKnown RBP2.53□□□□□ -2
VPS13B-207ENST00000518569 PRPF19Q9UMS4 504 aaKnown RBP2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms