RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 ANAPC7Q9UJX3 599 aa-2.65□□□□□ -2.83
RNU6-539P-201ENST00000516665 FARSAQ9Y285 508 aaKnown RBP-2.65□□□□□ -2.83
RNU6-539P-201ENST00000516665 UBE4BO95155 1302 aa-2.66□□□□□ -2.83
RNU6-539P-201ENST00000516665 GMNCA6NCL1 334 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 A6NCN8 305 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 TRDCB7Z8K6 153 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 NCR3O14931 201 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 CXCL13O43927 109 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 DOK2O60496 412 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 KLHL41O60662 606 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 ZNF737O75373 536 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 SERPINB7O75635 380 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 IGKV1D-33P01593 117 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 IGKV1-33P01594 117 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 SOD3P08294 240 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 POLR2EP19388 210 aaKnown RBP-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 AKR1C3P42330 323 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 RPS15AP62244 130 aaKnown RBP-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 QRFPP83859 136 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 OGDHQ02218 1023 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 LRRC75BQ2VPJ9 315 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 GLYATQ6IB77 296 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 ORMDL3Q8N138 153 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 OR10J6PQ8NGY7 276 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 KCNG3Q8TAE7 436 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 HTR3CQ8WXA8 447 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 FCGR1BQ92637 280 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 BCL2L2Q92843 193 aaPredicted RBP-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 MED8Q96G25 268 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 PRRC1Q96M27 445 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 PANX3Q96QZ0 392 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 EDEM2Q9BV94 578 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 GBA3Q9H227 469 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 TMEM38AQ9H6F2 299 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 SLC17A4Q9Y2C5 497 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 RPL36Q9Y3U8 105 aaKnown RBP-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 GRIN2BQ13224 1484 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 E9PCH4 1651 aa-2.66□□□□□ -2.84
RNU6-539P-201ENST00000516665 SLX4Q8IY92 1834 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 hCG_1807616A0A1W2PRN6 198 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 OR6C74A6NCV1 312 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 RBFOX3A6NFN3 312 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 H3BMM0 161 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 C19orf84I3L1E1 186 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 BEST1O76090 585 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 EIF4EP06730 217 aaKnown RBP-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 CAPN3P20807 821 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 CDKN1BP46527 198 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 KCNJ1P48048 391 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 CCT5P48643 541 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 CCL11P51671 97 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 CHIT1Q13231 466 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 BTG3Q14201 252 aaPredicted RBP-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 OR52E8Q6IFG1 317 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 CNSTQ6PJW8 725 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 ERN2Q76MJ5 926 aaKnown RBP-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 SLC16A14Q7RTX9 510 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 YRDCQ86U90 279 aaKnown RBP-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 CEP112Q8N8E3 955 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 STKLD1Q8NE28 680 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 OR52M1Q8NGK5 317 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 OR1L1Q8NH94 360 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 URGCPQ8TCY9 931 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 UBE2WQ96B02 151 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 TMEM186Q96B77 213 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 APH1AQ96BI3 265 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 DCPSQ96C86 337 aaKnown RBP-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 SEH1LQ96EE3 360 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 CHST5Q9GZS9 411 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 VCX2Q9H322 139 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 VCX3AQ9NNX9 186 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 ZCCHC17Q9NP64 241 aaKnown RBP-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 UFSP2Q9NUQ7 469 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 C1orf123Q9NWV4 160 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 CHCHD3Q9NX63 227 aaKnown RBP-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 GIN1Q9NXP7 522 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 FAM169AQ9Y6X4 670 aa-2.67□□□□□ -2.84
RNU6-539P-201ENST00000516665 A0A0B4J2A0 478 aa-2.68□□□□□ -2.84
RNU6-539P-201ENST00000516665 A0A0J9YYE9 177 aa-2.68□□□□□ -2.84
RNU6-539P-201ENST00000516665 L7N2F9 121 aa-2.68□□□□□ -2.84
RNU6-539P-201ENST00000516665 M0R378 163 aa-2.68□□□□□ -2.84
RNU6-539P-201ENST00000516665 ZBTB14O43829 449 aa-2.68□□□□□ -2.84
RNU6-539P-201ENST00000516665 GATBO75879 557 aaKnown RBP-2.68□□□□□ -2.84
RNU6-539P-201ENST00000516665 SCO1O75880 301 aa-2.68□□□□□ -2.84
RNU6-539P-201ENST00000516665 GH1P01241 217 aa-2.68□□□□□ -2.84
RNU6-539P-201ENST00000516665 TRBC1P01850 177 aa-2.68□□□□□ -2.84
RNU6-539P-201ENST00000516665 CD2P06729 351 aa-2.68□□□□□ -2.84
RNU6-539P-201ENST00000516665 GSTT2P0CG29 244 aa-2.68□□□□□ -2.84
RNU6-539P-201ENST00000516665 GSTT2BP0CG30 244 aa-2.68□□□□□ -2.84
RNU6-539P-201ENST00000516665 CPMP14384 443 aa-2.68□□□□□ -2.84
RNU6-539P-201ENST00000516665 CTLA4P16410 223 aa-2.68□□□□□ -2.84
RNU6-539P-201ENST00000516665 TCN1P20061 433 aaPredicted RBP-2.68□□□□□ -2.84
RNU6-539P-201ENST00000516665 RAB3BP20337 219 aa-2.68□□□□□ -2.84
RNU6-539P-201ENST00000516665 KITLGP21583 273 aa-2.68□□□□□ -2.84
RNU6-539P-201ENST00000516665 CD70P32970 193 aa-2.68□□□□□ -2.84
RNU6-539P-201ENST00000516665 RORAP35398 523 aa-2.68□□□□□ -2.84
RNU6-539P-201ENST00000516665 DDOSTP39656 456 aa-2.68□□□□□ -2.84
RNU6-539P-201ENST00000516665 MAGEA4P43358 317 aa-2.68□□□□□ -2.84
RNU6-539P-201ENST00000516665 RAP1GDS1P52306 607 aa-2.68□□□□□ -2.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms