RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 YPEL5P62699 121 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 BAMBIQ13145 260 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 STAC2Q6ZMT1 411 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 LSMEM1Q8N8F7 131 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 C19orf47Q8N9M1 422 aaKnown RBP12.12□□□□□ -0.47
TCOF1-214ENST00000515035 PBX4Q9BYU1 374 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 FGF20Q9NP95 211 aaPredicted RBP12.12□□□□□ -0.47
TCOF1-214ENST00000515035 BCAT2O15382 392 aaPredicted RBP12.11□□□□□ -0.47
TCOF1-214ENST00000515035 CHRNB4P30926 498 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 MMP15P51511 669 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 TFAP2EQ6VUC0 442 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 RLN3Q8WXF3 142 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 STACQ99469 402 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 H3BNC9 293 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 ABLIM3O94929 683 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 PTBP3O95758 552 aaKnown RBP12.11□□□□□ -0.47
TCOF1-214ENST00000515035 EPXP11678 715 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 ETFRF1Q6IPR1 90 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 CORO6Q6QEF8 472 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 OR51E1Q8TCB6 317 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 DERL3Q96Q80 235 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 BARHL1Q9BZE3 327 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 SPINT2O43291 252 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 CTXN2P0C2S0 81 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 RAB13P51153 203 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 SLC25A35Q3KQZ1 300 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 FAM27D1Q5T7N8 215 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 H1FNTQ75WM6 255 aaPredicted RBP12.11□□□□□ -0.47
TCOF1-214ENST00000515035 ZNF485Q8NCK3 441 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 SLC35A4Q96G79 324 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 VAMP8Q9BV40 100 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 GPR160Q9UJ42 338 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 PRAMEF25A6NGN4 478 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 PYCARD-AS1I3L0S3 204 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 XRCC2O43543 280 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 PRAMEF5Q5TYX0 476 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 PRAMEF6Q5VXH4 476 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 GLDNQ6ZMI3 551 aaPredicted RBP12.11□□□□□ -0.47
TCOF1-214ENST00000515035 OR2AE1Q8NHA4 323 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 ZNF596Q8TC21 504 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 SDF2Q99470 211 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 BOKQ9UMX3 212 aaPredicted RBP12.11□□□□□ -0.47
TCOF1-214ENST00000515035 ASB1Q9Y576 335 aa12.11□□□□□ -0.47
TCOF1-214ENST00000515035 ARRDC5A6NEK1 342 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 TIMM8AO60220 97 aaPredicted RBP12.1□□□□□ -0.47
TCOF1-214ENST00000515035 EIF1BO60739 113 aaKnown RBP12.1□□□□□ -0.47
TCOF1-214ENST00000515035 GLSO94925 669 aaPredicted RBP12.1□□□□□ -0.47
TCOF1-214ENST00000515035 MMP7P09237 267 aaPredicted RBP12.1□□□□□ -0.47
TCOF1-214ENST00000515035 PAX6P26367 422 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 OPRM1P35372 400 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 MEOX2P50222 304 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 ADIPOR2Q86V24 386 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 SPACA5Q96QH8 159 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 SOX7Q9BT81 388 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 PARD6AQ9NPB6 346 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 LRIT1Q9P2V4 623 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 NOSIPQ9Y314 301 aaKnown RBP12.1□□□□□ -0.47
TCOF1-214ENST00000515035 EDDM3BP56851 147 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 IQCJQ1A5X6 159 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 MOGAT2Q3SYC2 334 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 ZNF385BQ569K4 471 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 FAM162BQ5T6X4 162 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 C11orf87Q6NUJ2 197 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 TOMM20LQ6UXN7 152 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 MARCH3Q86UD3 253 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 ARHGDIGQ99819 225 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 GINS3Q9BRX5 216 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 EPHX3Q9H6B9 360 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 ISG20L2Q9H9L3 353 aaKnown RBP12.1□□□□□ -0.47
TCOF1-214ENST00000515035 CTSFQ9UBX1 484 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 MMP24Q9Y5R2 645 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.1□□□□□ -0.47
TCOF1-214ENST00000515035 IL5P05113 134 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 RBP2P50120 134 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 PTTG1IPP53801 180 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 TPPP2P59282 170 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 TRMT12Q53H54 448 aaKnown RBP12.1□□□□□ -0.47
TCOF1-214ENST00000515035 SH2D5Q6ZV89 423 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 ADGRG3Q86Y34 549 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 BATF2Q8N1L9 274 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 GPR173Q9NS66 373 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 ZNF814B7Z6K7 855 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 CD300CQ08708 224 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 XAF1Q6GPH4 301 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 ASTLQ6HA08 431 aaPredicted RBP12.1□□□□□ -0.47
TCOF1-214ENST00000515035 MOB1BQ7L9L4 216 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 PTOV1Q86YD1 416 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 OR10P1Q8NGE3 313 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 SEMA6CQ9H3T2 930 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 CYSLTR2Q9NS75 346 aa12.1□□□□□ -0.47
TCOF1-214ENST00000515035 ZMAT5Q9UDW3 170 aaKnown RBP12.1□□□□□ -0.47
TCOF1-214ENST00000515035 QDPRP09417 244 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 ZNRF4Q8WWF5 429 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 ORAI1Q96D31 301 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 SCMH1Q96GD3 660 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 CSF3RQ99062 836 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 SHARPINQ9H0F6 387 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 PRO1933Q9H354 126 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 NRAPQ86VF7 1730 aa12.09□□□□□ -0.47
TCOF1-214ENST00000515035 POM121BA6NF01 834 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms