RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 TUBG1P23258 451 aa11.93□□□□□ -0.5
USP46-209ENST00000514536 PRKXP51817 358 aa11.93□□□□□ -0.5
USP46-209ENST00000514536 HCCSP53701 268 aa11.93□□□□□ -0.5
USP46-209ENST00000514536 PSG7Q13046 419 aa11.93□□□□□ -0.5
USP46-209ENST00000514536 TNK1Q13470 666 aa11.93□□□□□ -0.5
USP46-209ENST00000514536 RCN1Q15293 331 aa11.93□□□□□ -0.5
USP46-209ENST00000514536 NXNL2Q5VZ03 156 aa11.93□□□□□ -0.5
USP46-209ENST00000514536 MEPCEQ7L2J0 689 aaKnown RBP11.93□□□□□ -0.5
USP46-209ENST00000514536 ZNF525Q8N782 197 aa11.93□□□□□ -0.5
USP46-209ENST00000514536 OR5L1Q8NGL2 311 aa11.93□□□□□ -0.5
USP46-209ENST00000514536 THEM6Q8WUY1 208 aa11.93□□□□□ -0.5
USP46-209ENST00000514536 NEU4Q8WWR8 484 aaPredicted RBP11.93□□□□□ -0.5
USP46-209ENST00000514536 CMBLQ96DG6 245 aa11.93□□□□□ -0.5
USP46-209ENST00000514536 COG8Q96MW5 612 aa11.93□□□□□ -0.5
USP46-209ENST00000514536 AMELYQ99218 206 aa11.93□□□□□ -0.5
USP46-209ENST00000514536 TOR3AQ9H497 397 aa11.93□□□□□ -0.5
USP46-209ENST00000514536 TUBG2Q9NRH3 451 aa11.93□□□□□ -0.5
USP46-209ENST00000514536 PTTG3PQ9NZH4 202 aa11.93□□□□□ -0.5
USP46-209ENST00000514536 ZNF878C9JN71 531 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 H3BSA7 217 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 J3QW42 95 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 M0R135 149 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 MRPL3P09001 348 aaKnown RBP11.92□□□□□ -0.5
USP46-209ENST00000514536 SLC6A9P48067 706 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 CDC42P60953 191 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 HLXQ14774 488 aaPredicted RBP11.92□□□□□ -0.5
USP46-209ENST00000514536 LCN1P1Q5VSP4 162 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 DNM1P46Q6ZS02 220 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 COLCA1Q6ZS62 124 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 SLC16A9Q7RTY1 509 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 CIARTQ8N365 385 aaPredicted RBP11.92□□□□□ -0.5
USP46-209ENST00000514536 OTOSQ8NHW6 89 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 SNX33Q8WV41 574 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 GTF3AQ92664 365 aaKnown RBP11.92□□□□□ -0.5
USP46-209ENST00000514536 UBE2FQ969M7 185 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 HAVCR1Q96D42 359 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 ZNF799Q96GE5 643 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 HRASLS5Q96KN8 279 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 MBOAT4Q96T53 435 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 KCNJ15Q99712 375 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 RHNO1Q9BSD3 238 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 C1QTNF5Q9BXJ0 243 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 SETD2Q9BYW2 2564 aaPredicted RBP11.92□□□□□ -0.5
USP46-209ENST00000514536 ZFHX3Q15911 3703 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 MTORP42345 2549 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 ITPR3Q14573 2671 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 C17orf100A8MU93 164 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 H7C1Q1 480 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 TIMM8AO60220 97 aaPredicted RBP11.92□□□□□ -0.5
USP46-209ENST00000514536 LYNP07948 512 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 OTX1P32242 354 aaPredicted RBP11.92□□□□□ -0.5
USP46-209ENST00000514536 SLC15A1P46059 708 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 GRB2P62993 217 aaKnown RBP11.92□□□□□ -0.5
USP46-209ENST00000514536 TRIP10Q15642 601 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 CARTPTQ16568 116 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 LRRC36Q1X8D7 754 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 CLEC2AQ6UVW9 174 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 ZNF283Q8N7M2 679 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 ZNF454Q8N9F8 522 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 OR8J1Q8NGP2 316 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 FAM81AQ8TBF8 368 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 RNF133Q8WVZ7 376 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 YIPF3Q9GZM5 350 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 IMPAD1Q9NX62 359 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 PURGQ9UJV8 347 aaKnown RBP11.92□□□□□ -0.5
USP46-209ENST00000514536 KLHDC2Q9Y2U9 406 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 N6AMT1Q9Y5N5 214 aa11.92□□□□□ -0.5
USP46-209ENST00000514536 E9PQ18 207 aa11.91□□□□□ -0.5
USP46-209ENST00000514536 SMAD7O15105 426 aaKnown RBP11.91□□□□□ -0.5
USP46-209ENST00000514536 SPRY3O43610 288 aa11.91□□□□□ -0.5
USP46-209ENST00000514536 MT-ND5P03915 603 aa11.91□□□□□ -0.5
USP46-209ENST00000514536 H2BFMP0C1H6 154 aa11.91□□□□□ -0.5
USP46-209ENST00000514536 SLC2A1P11166 492 aa11.91□□□□□ -0.5
USP46-209ENST00000514536 DAOP14920 347 aa11.91□□□□□ -0.5
USP46-209ENST00000514536 RAC2P15153 192 aa11.91□□□□□ -0.5
USP46-209ENST00000514536 ALOX5APP20292 161 aa11.91□□□□□ -0.5
USP46-209ENST00000514536 MMP15P51511 669 aa11.91□□□□□ -0.5
USP46-209ENST00000514536 DSCR9P59020 149 aa11.91□□□□□ -0.5
USP46-209ENST00000514536 ELF3P78545 371 aaPredicted RBP11.91□□□□□ -0.5
USP46-209ENST00000514536 LPCAT4Q643R3 524 aa11.91□□□□□ -0.5
USP46-209ENST00000514536 DRAM2Q6UX65 266 aa11.91□□□□□ -0.5
USP46-209ENST00000514536 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.91□□□□□ -0.5
USP46-209ENST00000514536 GID4Q8IVV7 300 aa11.91□□□□□ -0.5
USP46-209ENST00000514536 GALNT4Q8N4A0 578 aa11.91□□□□□ -0.5
USP46-209ENST00000514536 FAM168AQ92567 244 aa11.91□□□□□ -0.5
USP46-209ENST00000514536 ZNF582Q96NG8 517 aaPredicted RBP11.91□□□□□ -0.5
USP46-209ENST00000514536 DLL4Q9NR61 685 aa11.91□□□□□ -0.5
USP46-209ENST00000514536 LAMP5Q9UJQ1 280 aa11.91□□□□□ -0.5
USP46-209ENST00000514536 GMPPBQ9Y5P6 360 aa11.91□□□□□ -0.5
USP46-209ENST00000514536 MAP1AP78559 2803 aaPredicted RBP11.9□□□□□ -0.5
USP46-209ENST00000514536 IGHV4-30-2A0A087WSY4 118 aa11.9□□□□□ -0.5
USP46-209ENST00000514536 PLSCR5A0PG75 271 aa11.9□□□□□ -0.5
USP46-209ENST00000514536 C5orf63A6NC05 138 aa11.9□□□□□ -0.5
USP46-209ENST00000514536 SLC22A31A6NKX4 558 aa11.9□□□□□ -0.5
USP46-209ENST00000514536 RNF223E7ERA6 249 aa11.9□□□□□ -0.5
USP46-209ENST00000514536 LYNX1G3V0Z9 82 aa11.9□□□□□ -0.5
USP46-209ENST00000514536 HPXP02790 462 aa11.9□□□□□ -0.5
USP46-209ENST00000514536 LYNX1P0DP58 116 aa11.9□□□□□ -0.5
USP46-209ENST00000514536 KITLGP21583 273 aa11.9□□□□□ -0.5
USP46-209ENST00000514536 HSD11B1P28845 292 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms