RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 SLC25A25Q6KCM7 469 aa4.85□□□□□ -1.63
NUP54-215ENST00000514313 CEMP1Q6PRD7 247 aaPredicted RBP4.85□□□□□ -1.63
NUP54-215ENST00000514313 WDR82Q6UXN9 313 aa4.85□□□□□ -1.63
NUP54-215ENST00000514313 NOXO1Q8NFA2 376 aa4.85□□□□□ -1.63
NUP54-215ENST00000514313 ZNF799Q96GE5 643 aa4.85□□□□□ -1.63
NUP54-215ENST00000514313 SIKE1Q9BRV8 207 aa4.85□□□□□ -1.63
NUP54-215ENST00000514313 GAL3ST2Q9H3Q3 398 aa4.85□□□□□ -1.63
NUP54-215ENST00000514313 XKR8Q9H6D3 395 aa4.85□□□□□ -1.63
NUP54-215ENST00000514313 HAUS4Q9H6D7 363 aa4.85□□□□□ -1.63
NUP54-215ENST00000514313 RBAKQ9NYW8 714 aaPredicted RBP4.85□□□□□ -1.63
NUP54-215ENST00000514313 BZW2Q9Y6E2 419 aaKnown RBP4.85□□□□□ -1.63
NUP54-215ENST00000514313 MTCL1Q9Y4B5 1905 aaKnown RBP4.84□□□□□ -1.63
NUP54-215ENST00000514313 A8MU10 97 aa4.84□□□□□ -1.63
NUP54-215ENST00000514313 ANKRD65E5RJM6 399 aa4.84□□□□□ -1.63
NUP54-215ENST00000514313 NVLO15381 856 aaKnown RBP4.84□□□□□ -1.63
NUP54-215ENST00000514313 HLA-DPB1P04440 258 aa4.84□□□□□ -1.63
NUP54-215ENST00000514313 DNAH10OSP0CZ25 163 aa4.84□□□□□ -1.63
NUP54-215ENST00000514313 ADRB3P13945 408 aa4.84□□□□□ -1.63
NUP54-215ENST00000514313 CSNK1A1P48729 337 aa4.84□□□□□ -1.63
NUP54-215ENST00000514313 P2RX1P51575 399 aa4.84□□□□□ -1.63
NUP54-215ENST00000514313 ZNF133P52736 654 aaPredicted RBP4.84□□□□□ -1.63
NUP54-215ENST00000514313 XIAPP98170 497 aa4.84□□□□□ -1.63
NUP54-215ENST00000514313 C5orf64Q2M2E5 130 aa4.84□□□□□ -1.63
NUP54-215ENST00000514313 MKXQ8IYA7 352 aa4.84□□□□□ -1.63
NUP54-215ENST00000514313 METTL13Q8N6R0 699 aa4.84□□□□□ -1.63
NUP54-215ENST00000514313 DUSP18Q8NEJ0 188 aa4.84□□□□□ -1.63
NUP54-215ENST00000514313 BAALCQ8WXS3 180 aa4.84□□□□□ -1.63
NUP54-215ENST00000514313 BMFQ96LC9 184 aa4.84□□□□□ -1.63
NUP54-215ENST00000514313 SPNS1Q9H2V7 528 aa4.84□□□□□ -1.63
NUP54-215ENST00000514313 SAV1Q9H4B6 383 aaPredicted RBP4.84□□□□□ -1.63
NUP54-215ENST00000514313 NOX3Q9HBY0 568 aa4.84□□□□□ -1.63
NUP54-215ENST00000514313 FAM49BQ9NUQ9 324 aa4.84□□□□□ -1.63
NUP54-215ENST00000514313 IFNKQ9P0W0 207 aa4.84□□□□□ -1.63
NUP54-215ENST00000514313 NOTCH3Q9UM47 2321 aa4.84□□□□□ -1.64
NUP54-215ENST00000514313 PIKFYVEQ9Y2I7 2098 aa4.84□□□□□ -1.64
NUP54-215ENST00000514313 TET2Q6N021 2002 aaPredicted RBP4.84□□□□□ -1.64
NUP54-215ENST00000514313 ASTN1O14525 1302 aa4.83□□□□□ -1.64
NUP54-215ENST00000514313 SYCE1LA8MT33 242 aa4.83□□□□□ -1.64
NUP54-215ENST00000514313 CENPXA8MT69 81 aa4.83□□□□□ -1.64
NUP54-215ENST00000514313 CD37P11049 281 aa4.83□□□□□ -1.64
NUP54-215ENST00000514313 PSG2P11465 335 aa4.83□□□□□ -1.64
NUP54-215ENST00000514313 CCNG1P51959 295 aa4.83□□□□□ -1.64
NUP54-215ENST00000514313 CLDN6P56747 220 aa4.83□□□□□ -1.64
NUP54-215ENST00000514313 RPS23P62266 143 aaKnown RBP4.83□□□□□ -1.64
NUP54-215ENST00000514313 ERCC8Q13216 396 aa4.83□□□□□ -1.64
NUP54-215ENST00000514313 MADCAM1Q13477 382 aa4.83□□□□□ -1.64
NUP54-215ENST00000514313 DGCR6Q14129 220 aa4.83□□□□□ -1.64
NUP54-215ENST00000514313 FAM92BQ6ZTR7 304 aa4.83□□□□□ -1.64
NUP54-215ENST00000514313 PCP2Q8IVA1 136 aa4.83□□□□□ -1.64
NUP54-215ENST00000514313 C12orf56Q8IXR9 622 aa4.83□□□□□ -1.64
NUP54-215ENST00000514313 FAM86B1Q8N7N1 296 aa4.83□□□□□ -1.64
NUP54-215ENST00000514313 Q8N976 141 aa4.83□□□□□ -1.64
NUP54-215ENST00000514313 ASCC1Q8N9N2 400 aaKnown RBP4.83□□□□□ -1.64
NUP54-215ENST00000514313 OR13C9Q8NGT0 318 aa4.83□□□□□ -1.64
NUP54-215ENST00000514313 ZNF681Q96N22 645 aa4.83□□□□□ -1.64
NUP54-215ENST00000514313 LZTS2Q9BRK4 669 aa4.83□□□□□ -1.64
NUP54-215ENST00000514313 CHID1Q9BWS9 393 aa4.83□□□□□ -1.64
NUP54-215ENST00000514313 WSB1Q9Y6I7 421 aa4.83□□□□□ -1.64
NUP54-215ENST00000514313 ZNFX1Q9P2E3 1918 aaKnown RBP4.82□□□□□ -1.64
NUP54-215ENST00000514313 H3BN98 237 aa4.82□□□□□ -1.64
NUP54-215ENST00000514313 NMT2O60551 498 aa4.82□□□□□ -1.64
NUP54-215ENST00000514313 ETHE1O95571 254 aa4.82□□□□□ -1.64
NUP54-215ENST00000514313 BCHEP06276 602 aa4.82□□□□□ -1.64
NUP54-215ENST00000514313 TCP1P17987 556 aaKnown RBP4.82□□□□□ -1.64
NUP54-215ENST00000514313 RAB3AP20336 220 aa4.82□□□□□ -1.64
NUP54-215ENST00000514313 HCAR3P49019 387 aa4.82□□□□□ -1.64
NUP54-215ENST00000514313 UBE2NP61088 152 aaKnown RBP4.82□□□□□ -1.64
NUP54-215ENST00000514313 TMED1Q13445 227 aa4.82□□□□□ -1.64
NUP54-215ENST00000514313 CHRFAM7AQ494W8 412 aa4.82□□□□□ -1.64
NUP54-215ENST00000514313 ZNF658BQ4V348 819 aaPredicted RBP4.82□□□□□ -1.64
NUP54-215ENST00000514313 SLC35D2Q76EJ3 337 aa4.82□□□□□ -1.64
NUP54-215ENST00000514313 FAM58AQ8N1B3 248 aa4.82□□□□□ -1.64
NUP54-215ENST00000514313 ARHGAP18Q8N392 663 aa4.82□□□□□ -1.64
NUP54-215ENST00000514313 CSGALNACT2Q8N6G5 542 aa4.82□□□□□ -1.64
NUP54-215ENST00000514313 OR10W1Q8NGF6 305 aa4.82□□□□□ -1.64
NUP54-215ENST00000514313 ZNF596Q8TC21 504 aa4.82□□□□□ -1.64
NUP54-215ENST00000514313 ABHD3Q8WU67 409 aa4.82□□□□□ -1.64
NUP54-215ENST00000514313 RGP1Q92546 391 aaPredicted RBP4.82□□□□□ -1.64
NUP54-215ENST00000514313 LRRC39Q96DD0 335 aa4.82□□□□□ -1.64
NUP54-215ENST00000514313 SGTBQ96EQ0 304 aa4.82□□□□□ -1.64
NUP54-215ENST00000514313 CEP170P1Q96L14 293 aa4.82□□□□□ -1.64
NUP54-215ENST00000514313 SCGB3A2Q96PL1 93 aa4.82□□□□□ -1.64
NUP54-215ENST00000514313 AGMATQ9BSE5 352 aa4.82□□□□□ -1.64
NUP54-215ENST00000514313 ZDHHC4Q9NPG8 344 aa4.82□□□□□ -1.64
NUP54-215ENST00000514313 NYAP2Q9P242 653 aa4.82□□□□□ -1.64
NUP54-215ENST00000514313 IGHV5-51A0A0C4DH38 117 aa4.81□□□□□ -1.64
NUP54-215ENST00000514313 TLX1NBP0CAT3 122 aa4.81□□□□□ -1.64
NUP54-215ENST00000514313 RAB5AP20339 215 aa4.81□□□□□ -1.64
NUP54-215ENST00000514313 MDKP21741 143 aaPredicted RBP4.81□□□□□ -1.64
NUP54-215ENST00000514313 PFN2P35080 140 aa4.81□□□□□ -1.64
NUP54-215ENST00000514313 CSKP41240 450 aa4.81□□□□□ -1.64
NUP54-215ENST00000514313 YWHAEP62258 255 aaKnown RBP4.81□□□□□ -1.64
NUP54-215ENST00000514313 TFDP2Q14188 446 aa4.81□□□□□ -1.64
NUP54-215ENST00000514313 RWDD4Q6NW29 188 aaKnown RBP4.81□□□□□ -1.64
NUP54-215ENST00000514313 ZNF530Q6P9A1 599 aaPredicted RBP4.81□□□□□ -1.64
NUP54-215ENST00000514313 PRSS58Q8IYP2 241 aa4.81□□□□□ -1.64
NUP54-215ENST00000514313 COX18Q8N8Q8 333 aa4.81□□□□□ -1.64
NUP54-215ENST00000514313 GPR26Q8NDV2 337 aa4.81□□□□□ -1.64
NUP54-215ENST00000514313 OR11H7Q8NGC8 314 aa4.81□□□□□ -1.64
NUP54-215ENST00000514313 TFGQ92734 400 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms